Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011025 Sechium edule HOM05D003278 ORTHO05D373220 1.7e-101 372.9 209 100.0
Sed0025572 Sechium edule HOM05D003278 ORTHO05D003738 1.0e-13 81.3 56 78.6
ClCG05G012820 Citrullus lanatus HOM05D003278 ORTHO05D003738 5.0e-13 79.0 56 76.8
QL02p070117 Quercus lobata HOM05D003278 ORTHO05D003738 1.1e-12 77.8 57 75.4
MELO3C014796.2 Cucumis melo HOM05D003278 ORTHO05D003738 2.5e-12 76.6 56 73.2
CsaV3_3G027640 Cucumis sativus L. HOM05D003278 ORTHO05D003738 2.5e-12 76.6 56 73.2
Cpa.g.sc70.91 Carica papaya HOM05D003278 ORTHO05D003738 7.1e-12 75.1 58 65.5
Potri.001G323400 Populus trichocarpa HOM05D003278 ORTHO05D003738 7.1e-12 75.1 57 71.9
CiPaw.03G003600 Carya illinoinensis HOM05D003278 ORTHO05D003738 9.3e-12 74.7 58 74.1
FvH4_6g54110 Fragaria vesca HOM05D003278 ORTHO05D003738 9.3e-12 74.7 63 61.9
FAN09G0488 Fragaria x ananassa HOM05D003278 ORTHO05D003738 9.3e-12 74.7 63 61.9
vmacro18369 Vaccinium macrocarpon HOM05D003278 ORTHO05D003738 2.1e-11 73.6 56 67.9
CSS0029868 Camellia sinensis var. sinensis HOM05D003278 ORTHO05D003738 2.7e-11 73.2 56 66.1
RcHm_v2.0_Chr2g0176281 Rosa chinensis HOM05D003278 ORTHO05D003738 2.7e-11 73.2 58 69.0
GSVIVG01033016001 Vitis vinifera HOM05D003278 ORTHO05D003738 2.7e-11 73.2 56 67.9
Rhsim08G0040400 Rhododendron simsii HOM05D003278 ORTHO05D003738 3.5e-11 72.8 56 67.9
TAR371G0395 Trochodendron aralioides HOM05D003278 ORTHO05D003738 4.6e-11 72.4 56 67.9
Ciclev10016821m.g Citrus clementina HOM05D003278 ORTHO05D003738 6.1e-11 72.0 56 66.1
Duzib187G1801 Durio zibethinus HOM05D003278 ORTHO05D003738 6.1e-11 72.0 58 65.5
Gohir.D04G073700 Gossypium hirsutum HOM05D003278 ORTHO05D003738 1.0e-10 71.2 58 67.2
Prupe.3G311500 Prunus persica HOM05D003278 ORTHO05D003738 1.0e-10 71.2 57 66.7
EL10Ac6g13378 Beta vulgaris HOM05D003278 ORTHO05D003738 1.3e-10 70.9 55 69.1
FAN05G4705 Fragaria x ananassa HOM05D003278 ORTHO05D003738 1.3e-10 70.9 58 65.5
Atru.chr6.2630 Acer truncatum HOM05D003278 ORTHO05D003738 1.8e-10 70.5 56 66.1
COL.COLO4_13334 Corchorus olitorius HOM05D003278 ORTHO05D003738 1.8e-10 70.5 50 72.0
FAN02G4589 Fragaria x ananassa HOM05D003278 ORTHO05D003738 1.8e-10 70.5 64 60.9
Lj1g0002913 Lotus japonicus HOM05D003278 ORTHO05D003738 1.8e-10 70.5 54 72.2
FAN14G4759 Fragaria x ananassa HOM05D003278 ORTHO05D003738 2.3e-10 70.1 55 67.3
Gohir.A05G334800 Gossypium hirsutum HOM05D003278 ORTHO05D003738 2.3e-10 70.1 58 65.5
TWI32G0304 Tripterygium wilfordii HOM05D003278 ORTHO05D003738 2.3e-10 70.1 58 63.8
Gorai.012G083000 Gossypium raimondii HOM05D003278 ORTHO05D003738 3.0e-10 69.7 58 65.5
Hma1.2p1_0421F.1_g150030 Hydrangea macrophylla HOM05D003278 ORTHO05D003738 3.0e-10 69.7 55 67.3
Nn4g22194 Nelumbo nucifera HOM05D003278 ORTHO05D003738 3.0e-10 69.7 66 59.1
PGR142G1270 Punica granatum HOM05D003278 ORTHO05D003738 3.0e-10 69.7 49 75.5
Thecc.04G044100 Theobroma cacao HOM05D003278 ORTHO05D003738 3.0e-10 69.7 58 63.8
Duzib264G0022 Durio zibethinus HOM05D003278 ORTHO05D003738 3.9e-10 69.3 57 64.9
SGA_v2.0_scaffold253G45157 Striga asiatica HOM05D003278 ORTHO05D003738 3.9e-10 69.3 56 66.1
CiPaw.04G002400 Carya illinoinensis HOM05D003278 ORTHO05D003738 5.1e-10 68.9 50 74.0
Dinv25624 Davidia involucrata HOM05D003278 ORTHO05D003738 5.1e-10 68.9 67 61.2
Gorai.011G087400 Gossypium raimondii HOM05D003278 ORTHO05D003738 5.1e-10 68.9 58 63.8
Manes.04G091080 Manihot esculenta HOM05D003278 ORTHO05D003738 5.1e-10 68.9 57 63.2
arahy.Tifrunner.gnm1.ann1.17PZW3 Arachis hypogaea HOM05D003278 ORTHO05D003738 6.7e-10 68.6 64 56.2
arahy.Tifrunner.gnm1.ann1.IB6BQ9 Arachis hypogaea HOM05D003278 ORTHO05D003738 6.7e-10 68.6 64 56.2
ECA246G3103 Erigeron canadensis HOM05D003278 ORTHO05D003738 8.7e-10 68.2 67 61.2
MD17G1009400 Malus domestica HOM05D003278 ORTHO05D003738 8.7e-10 68.2 59 66.1
Nn3g16328 Nelumbo nucifera HOM05D003278 ORTHO05D003738 8.7e-10 68.2 57 61.4
SalBow4G1316 Salvia bowleyana HOM05D003278 ORTHO05D003738 8.7e-10 68.2 56 67.9
CDE02G3264 Ceratophyllum demersum HOM05D003278 ORTHO05D003738 1.1e-09 67.8 64 56.2
Duzib147G0947 Durio zibethinus HOM05D003278 ORTHO05D003738 1.1e-09 67.8 58 62.1
Migut.F00023 Erythranthe guttata HOM05D003278 ORTHO05D003738 1.1e-09 67.8 67 56.7
MD09G1005300 Malus domestica HOM05D003278 ORTHO05D003738 1.1e-09 67.8 55 65.5
Hund02482 Selenicereus undatus HOM05D003278 ORTHO05D003738 1.1e-09 67.8 62 59.7
SGA_v2.0_scaffold44G16942 Striga asiatica HOM05D003278 ORTHO05D003738 1.1e-09 67.8 56 66.1
Actinidia19562 Actinidia chinensis HOM05D003278 ORTHO05D003738 1.5e-09 67.4 57 64.9
Dinv33296 Davidia involucrata HOM05D003278 ORTHO05D003738 1.5e-09 67.4 58 63.8
CDE06G2413 Ceratophyllum demersum HOM05D003278 ORTHO05D003738 1.9e-09 67.0 63 57.1
AUR62041088 Chenopodium quinoa HOM05D003278 ORTHO05D003738 1.9e-09 67.0 52 67.3
Haze_14926 Corylus avellana HOM05D003278 ORTHO05D003738 1.9e-09 67.0 59 64.4
Actinidia37737 Actinidia chinensis HOM05D003278 ORTHO05D003738 2.5e-09 66.6 55 67.3
Gohir.D07G238100 Gossypium hirsutum HOM05D003278 ORTHO05D003738 2.5e-09 66.6 58 58.6
Potri.017G061900 Populus trichocarpa HOM05D003278 ORTHO05D003738 2.5e-09 66.6 50 72.0
THA.LOC104821124 Tarenaya hassleriana HOM05D003278 ORTHO05D003738 2.5e-09 66.6 50 66.0
TWI34G2017 Tripterygium wilfordii HOM05D003278 ORTHO05D003738 2.5e-09 66.6 58 58.6
Gohir.A10G070801 Gossypium hirsutum HOM05D003278 ORTHO05D003738 3.3e-09 66.2 58 60.3
HanXRQChr15g0475771 Helianthus annuus HOM05D003278 ORTHO05D003738 3.3e-09 66.2 60 60.0
Lsat_1_v5_gn_0_13201 Lactuca sativa HOM05D003278 ORTHO05D003738 3.3e-09 66.2 60 61.7
VMungo1383G2948 Vigna mungo HOM05D003278 ORTHO05D003738 3.3e-09 66.2 57 68.4
Dinv23198 Davidia involucrata HOM05D003278 ORTHO05D003738 4.3e-09 65.9 66 51.5
Thhalv10004966m.g Eutrema salsugineum HOM05D003278 ORTHO05D003738 4.3e-09 65.9 53 60.4
Phvul.001G087200 Phaseolus vulgaris HOM05D003278 ORTHO05D003738 4.3e-09 65.9 57 66.7
Gorai.001G273900 Gossypium raimondii HOM05D003278 ORTHO05D003738 5.7e-09 65.5 58 56.9
PSO017G3850 Papaver somniferum HOM05D003278 ORTHO05D003738 5.7e-09 65.5 56 60.7
THA.LOC104822420 Tarenaya hassleriana HOM05D003278 ORTHO05D003738 5.7e-09 65.5 50 64.0
Ca_08116_v3 Cicer arietinum L. HOM05D003278 ORTHO05D003738 7.4e-09 65.1 60 60.0
Gorai.006G000700 Gossypium raimondii HOM05D003278 ORTHO05D003738 7.4e-09 65.1 50 60.0
PSO478G3999 Papaver somniferum HOM05D003278 ORTHO05D003738 7.4e-09 65.1 56 58.9
Peaxi162Scf00420g00076 Petunia axillaris HOM05D003278 ORTHO05D003738 7.4e-09 65.1 67 53.7
Eucgr.I01611 Eucalyptus grandis HOM05D003278 ORTHO05D003738 9.7e-09 64.7 65 58.5
Lalb_Chr22g0360081 Lupinus albus HOM05D003278 ORTHO05D003738 9.7e-09 64.7 47 68.1
Nitab4.5_0012236g0010 Nicotiana tabacum HOM05D003278 ORTHO05D003738 9.7e-09 64.7 58 56.9
TPR.G5764 Trifolium pratense HOM05D003278 ORTHO05D003738 9.7e-09 64.7 60 60.0
Ah.03g136310 Amaranthus hybridus HOM05D003278 ORTHO05D003738 1.3e-08 64.3 67 55.2
Manes.11G078900 Manihot esculenta HOM05D003278 ORTHO05D003738 1.3e-08 64.3 59 57.6
Medtr7g083560 Medicago truncatula HOM05D003278 ORTHO05D003738 1.3e-08 64.3 56 62.5
Oeu013479.1 Olea europaea HOM05D003278 ORTHO05D003738 1.3e-08 64.3 56 62.5
Aa31LG2G5730 Aethionema arabicum HOM05D003278 ORTHO05D003738 1.6e-08 63.9 60 55.0
Thhalv10014730m.g Eutrema salsugineum HOM05D003278 ORTHO05D003738 1.6e-08 63.9 57 54.4
Gohir.A07G230900 Gossypium hirsutum HOM05D003278 ORTHO05D003738 1.6e-08 63.9 58 58.6
Solyc02g094440.4 Solanum lycopersicum HOM05D003278 ORTHO05D003738 1.6e-08 63.9 56 60.7
Sopen02g039100 Solanum pennellii HOM05D003278 ORTHO05D003738 1.6e-08 63.9 56 60.7
PGSC0003DMG400020198 Solanum tuberosum HOM05D003278 ORTHO05D003738 1.6e-08 63.9 56 60.7
AL6G24690 Arabidopsis lyrata HOM05D003278 ORTHO05D003738 2.2e-08 63.5 57 56.1
AT5G14030 Arabidopsis thaliana HOM05D003278 ORTHO05D003738 2.2e-08 63.5 57 56.1
MSTRG.3051 Avicennia marina HOM05D003278 ORTHO05D003738 2.2e-08 63.5 56 60.7
Glyma.16G050800 Glycine max HOM05D003278 ORTHO05D003738 2.2e-08 63.5 57 64.9
Glyma.19G099900 Glycine max HOM05D003278 ORTHO05D003738 2.2e-08 63.5 64 59.4
Gohir.A09G000900 Gossypium hirsutum HOM05D003278 ORTHO05D003738 2.2e-08 63.5 58 55.2
Gohir.D10G080300 Gossypium hirsutum HOM05D003278 ORTHO05D003738 2.2e-08 63.5 58 60.3
Lj7C615G2 Lonicera japonica HOM05D003278 ORTHO05D003738 2.2e-08 63.5 62 56.5
Nitab4.5_0002172g0040 Nicotiana tabacum HOM05D003278 ORTHO05D003738 2.2e-08 63.5 67 55.2
Psat3g094840 Pisum sativum HOM05D003278 ORTHO05D003738 2.2e-08 63.5 60 58.3
TWI39G0190 Tripterygium wilfordii HOM05D003278 ORTHO05D003738 2.2e-08 63.5 44 72.7
CSS0047853 Camellia sinensis var. sinensis HOM05D003278 ORTHO05D003738 2.8e-08 63.2 49 69.4
Lalb_Chr22g0360061 Lupinus albus HOM05D003278 ORTHO05D003738 2.8e-08 63.2 54 61.1
TAR622G0821 Trochodendron aralioides HOM05D003278 ORTHO05D003738 2.8e-08 63.2 56 60.7
Lj9C484T7 Lonicera japonica HOM05D003278 ORTHO05D003738 3.7e-08 62.8 51 60.8
Lalb_Chr24g0403221 Lupinus albus HOM05D003278 ORTHO05D003738 3.7e-08 62.8 54 63.0
Sp2g15970 Schrenkiella parvula HOM05D003278 ORTHO05D003738 3.7e-08 62.8 57 56.1
THA.LOC104825648 Tarenaya hassleriana HOM05D003278 ORTHO05D003738 3.7e-08 62.8 53 60.4
Nitab4.5_0007858g0040 Nicotiana tabacum HOM05D003278 ORTHO05D003738 4.8e-08 62.4 58 55.2
Oeu039787.1 Olea europaea HOM05D003278 ORTHO05D003738 4.8e-08 62.4 56 60.7
Rhsim12G0179700 Rhododendron simsii HOM05D003278 ORTHO05D003738 4.8e-08 62.4 50 60.0
Sp6g29970 Schrenkiella parvula HOM05D003278 ORTHO05D003738 8.2e-08 61.6 57 52.6
unitig_27.g25341 Utricularia gibba HOM05D000127 ORTHO05D000243 8.2e-08 61.6 54 61.1
CSS0024805 Camellia sinensis var. sinensis HOM05D003278 ORTHO05D003738 1.1e-07 61.2 61 55.7
DCAR_021812 Daucus carota HOM05D003278 ORTHO05D003738 1.1e-07 61.2 59 57.6
Nitab4.5_0000519g0210 Nicotiana tabacum HOM05D003278 ORTHO05D003738 1.4e-07 60.8 67 52.2
Sc07g0003660 Simmondsia chinensis HOM05D003278 ORTHO05D003738 1.8e-07 60.5 52 63.5
A02p34810 Brassica napus HOM05D003278 ORTHO05D003738 2.4e-07 60.1 61 50.8
BraA02t08488Z Brassica rapa HOM05D003278 ORTHO05D003738 2.4e-07 60.1 61 50.8
CARHR199350 Cardamine hirsuta HOM05D003278 ORTHO05D003738 2.4e-07 60.1 57 52.6
A02p02310 Brassica napus HOM05D003278 ORTHO05D003738 3.1e-07 59.7 57 52.6
BraA02t05202Z Brassica rapa HOM05D003278 ORTHO05D003738 3.1e-07 59.7 57 52.6
Carub.0006s1222 Capsella rubella HOM05D003278 ORTHO05D003738 3.1e-07 59.7 59 54.2
Hund04242 Selenicereus undatus HOM05D003278 ORTHO05D003738 3.1e-07 59.7 58 55.2
A10p24380 Brassica napus HOM05D003278 ORTHO05D003738 4.1e-07 59.3 58 50.0
BraA10t44504Z Brassica rapa HOM05D003278 ORTHO05D003738 4.1e-07 59.3 58 50.0
BcaB01g05313 Brassica carinata HOM05D003278 ORTHO05D003738 5.3e-07 58.9 57 50.9
A03p06390 Brassica napus HOM05D003278 ORTHO05D003738 5.3e-07 58.9 57 50.9
C03p07350 Brassica napus HOM05D003278 ORTHO05D003738 5.3e-07 58.9 57 50.9
BolC3t13239H Brassica oleracea HOM05D003278 ORTHO05D003738 5.3e-07 58.9 57 50.9
BraA03t09968Z Brassica rapa HOM05D003278 ORTHO05D003738 5.3e-07 58.9 57 50.9
Oeu030645.1 Olea europaea HOM05D003278 ORTHO05D003738 5.3e-07 58.9 59 50.8
PGSC0003DMG400019852 Solanum tuberosum HOM05D003278 ORTHO05D003738 5.3e-07 58.9 64 48.4
Zm00001eb028940 Zea mays HOM05D003278 ORTHO05D003738 5.3e-07 58.9 58 51.7
Aa31LG5G11160 Aethionema arabicum HOM05D003278 ORTHO05D003738 6.9e-07 58.5 50 58.0
Peaxi162Scf00171g01123 Petunia axillaris HOM05D003278 ORTHO05D003738 6.9e-07 58.5 58 51.7
C02p06530 Brassica napus HOM05D003278 ORTHO05D003738 9.0e-07 58.2 57 50.9
BolC2t06600H Brassica oleracea HOM05D003278 ORTHO05D003738 9.0e-07 58.2 57 50.9
BolC2t11411H Brassica oleracea HOM05D003278 ORTHO05D003738 9.0e-07 58.2 61 49.2
BolC2t11413H Brassica oleracea HOM05D003278 ORTHO05D003738 9.0e-07 58.2 61 49.2
BolC2t11414H Brassica oleracea HOM05D003278 ORTHO05D003738 9.0e-07 58.2 61 49.2
BolC2t11416H Brassica oleracea HOM05D003278 ORTHO05D003738 9.0e-07 58.2 61 49.2
MBI11_g37078_MAGBIO Magnolia biondii HOM05D003278 ORTHO05D003738 9.0e-07 58.2 60 55.0
Nitab4.5_0000559g0330 Nicotiana tabacum HOM05D003278 ORTHO05D003738 9.0e-07 58.2 50 66.0
HPP92_020102 Vanilla planifolia HOM05D003278 ORTHO05D003738 9.0e-07 58.2 59 52.5
Aqoxy3G01757 Aquilegia oxysepala HOM05D003278 ORTHO05D003738 1.2e-06 57.8 54 53.7
Gohir.D09G000700 Gossypium hirsutum HOM05D003278 ORTHO05D003738 1.2e-06 57.8 43 62.8
Lalb_Chr06g0173751 Lupinus albus HOM05D003278 ORTHO05D003738 1.2e-06 57.8 64 53.1
ATR0582G314 Amborella trichopoda HOM05D003278 ORTHO05D003738 1.5e-06 57.4 65 43.1
arahy.Tifrunner.gnm1.ann1.SSHM9A Arachis hypogaea HOM05D003278 ORTHO05D003738 1.5e-06 57.4 58 51.7
BcaB07g30207 Brassica carinata HOM05D003278 ORTHO05D003738 1.5e-06 57.4 61 49.2
C09p63090 Brassica napus HOM05D003278 ORTHO05D003738 1.5e-06 57.4 58 48.3
BolC9t59145H Brassica oleracea HOM05D003278 ORTHO05D003738 1.5e-06 57.4 58 48.3
HanXRQChr17g0550841 Helianthus annuus HOM05D003278 ORTHO05D003738 1.5e-06 57.4 56 51.8
Lsat_1_v5_gn_0_19201 Lactuca sativa HOM05D003278 ORTHO05D003738 1.5e-06 57.4 55 54.5
BcaNung06032 Brassica carinata HOM05D003278 ORTHO05D003738 2.0e-06 57.0 67 47.8
Sc04g0000310 Simmondsia chinensis HOM05D003278 ORTHO05D003738 2.0e-06 57.0 68 52.9
MBI07_g37484_MAGBIO Magnolia biondii HOM05D003278 ORTHO05D003738 2.6e-06 56.6 57 50.9
Zm00001eb136630 Zea mays HOM05D003278 ORTHO05D003738 2.6e-06 56.6 53 58.5
AUR62029530 Chenopodium quinoa HOM05D003278 ORTHO05D003738 4.5e-06 55.8 71 47.9
vmacro16744 Vaccinium macrocarpon HOM05D003278 ORTHO05D003738 5.9e-06 55.5 57 45.6
C02p53380 Brassica napus HOM05D003278 ORTHO05D003738 7.7e-06 55.1 61 47.5
CAN.G637.57 Capsicum annuum HOM05D003278 ORTHO05D003738 7.7e-06 55.1 64 46.9
Cc07_g01150 Coffea canephora HOM05D003278 ORTHO05D003738 1.0e-05 54.7 64 48.4


User provided reference genes

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