Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 3.0e-60 235.0 116 100.0
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 8.2e-50 200.3 122 82.8
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 4.1e-49 198.0 124 82.3
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 1.8e-44 182.6 126 79.4
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 6.5e-39 164.1 120 70.8
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 6.5e-39 164.1 120 72.5
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 6.5e-39 164.1 120 72.5
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 4.2e-38 161.4 119 69.7
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 5.5e-38 161.0 120 68.3
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 7.2e-38 160.6 120 71.7
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 7.2e-38 160.6 119 70.6
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 4.7e-37 157.9 116 70.7
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 6.1e-37 157.5 119 68.9
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 1.8e-36 156.0 119 69.7
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 2.3e-36 155.6 122 65.6
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 3.0e-36 155.2 118 69.5
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 8.8e-36 153.7 134 64.2
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 8.8e-36 153.7 119 66.4
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.1e-35 153.3 122 66.4
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.5e-35 152.9 118 71.2
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 2.0e-35 152.5 116 69.8
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.0e-35 152.5 118 68.6
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.0e-35 152.5 122 67.2
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.6e-35 152.1 122 67.2
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 3.3e-35 151.8 118 68.6
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 3.3e-35 151.8 118 68.6
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 3.3e-35 151.8 118 68.6
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 7.4e-35 150.6 120 65.0
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 9.7e-35 150.2 119 63.9
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.3e-34 149.8 118 67.8
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 1.3e-34 149.8 116 64.7
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.7e-34 149.4 116 65.5
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 2.2e-34 149.1 119 70.6
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 2.2e-34 149.1 133 61.7
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 2.8e-34 148.7 116 65.5
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 4.8e-34 147.9 119 63.9
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 4.8e-34 147.9 120 64.2
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 6.3e-34 147.5 120 65.8
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 8.2e-34 147.1 126 65.1
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 1.1e-33 146.7 129 60.5
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.1e-33 146.7 120 65.8
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.1e-33 146.7 118 68.6
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 1.4e-33 146.4 125 64.8
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 1.4e-33 146.4 81 84.0
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 1.4e-33 146.4 125 64.8
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 1.4e-33 146.4 81 84.0
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 1.8e-33 146.0 118 66.1
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 2.4e-33 145.6 120 65.8
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 4.1e-33 144.8 122 63.9
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 4.1e-33 144.8 120 64.2
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 4.1e-33 144.8 120 63.3
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 5.3e-33 144.4 116 61.2
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 7.0e-33 144.1 129 62.0
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 7.0e-33 144.1 112 66.1
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 9.1e-33 143.7 119 65.5
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 9.1e-33 143.7 102 69.6
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.2e-32 143.3 102 69.6
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.5e-32 142.9 129 60.5
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 1.5e-32 142.9 127 60.6
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 2.0e-32 142.5 125 64.0
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 4.5e-32 141.4 128 60.2
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 7.7e-32 140.6 123 62.6
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 7.7e-32 140.6 123 63.4
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 1.0e-31 140.2 115 63.5
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.0e-31 140.2 79 82.3
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 1.0e-31 140.2 116 62.9
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 1.3e-31 139.8 111 61.3
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 1.7e-31 139.4 121 62.0
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 2.2e-31 139.0 111 64.9
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 2.9e-31 138.7 123 61.0
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 3.8e-31 138.3 123 61.8
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 3.8e-31 138.3 126 57.9
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 5.0e-31 137.9 117 62.4
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 6.5e-31 137.5 117 62.4
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.5e-30 136.3 129 60.5
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 7.2e-30 134.0 117 59.8
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 1.2e-29 133.3 97 70.1
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 3.6e-29 131.7 128 60.2
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 3.6e-29 131.7 78 76.9
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 4.7e-29 131.3 74 85.1
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 4.7e-29 131.3 79 82.3
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 6.1e-29 131.0 124 58.9
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 1.0e-28 130.2 80 75.0
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 1.0e-28 130.2 70 87.1
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 3.0e-28 128.6 121 59.5
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 1.1e-27 126.7 162 46.3
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 4.4e-27 124.8 92 68.5
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 5.7e-27 124.4 69 81.2
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 6.3e-26 120.9 116 56.9
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 1.0e-23 113.6 72 76.4
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 2.9e-23 112.1 70 71.4
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 6.5e-23 110.9 71 67.6
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.4e-20 103.2 48 100.0
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 5.2e-20 101.3 49 91.8
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 3.4e-19 98.6 76 69.7
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 3.5e-16 88.6 70 57.1
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 3.5e-16 88.6 58 69.0
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 8.5e-15 84.0 101 44.6
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 3.7e-10 68.6 114 40.4
CSS0040675 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 7.2e-06 54.3 68 47.1


User provided reference genes

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