Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 4.8e-79 299.7 146 100.0
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 2.7e-58 230.7 164 75.0
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 1.0e-57 228.8 164 73.8
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 2.0e-56 224.6 164 73.8
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 1.5e-40 171.8 165 54.5
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 2.0e-40 171.4 172 51.2
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 2.0e-40 171.4 172 51.2
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 2.6e-40 171.0 166 54.2
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 1.3e-39 168.7 166 54.2
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 1.3e-39 168.7 171 52.6
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 4.8e-39 166.8 171 50.9
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 6.3e-39 166.4 168 50.0
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 5.9e-37 159.8 171 49.7
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 5.9e-37 159.8 154 53.9
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 1.7e-36 158.3 111 66.7
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.9e-36 157.5 170 50.0
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.8e-36 157.1 168 51.2
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.8e-36 157.1 168 51.2
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 6.5e-36 156.4 130 58.5
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 4.2e-35 153.7 174 51.1
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 5.5e-35 153.3 114 68.4
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 5.5e-35 153.3 161 49.7
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 2.1e-34 151.4 133 56.4
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 2.1e-34 151.4 168 47.6
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 2.1e-34 151.4 104 65.4
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 2.1e-34 151.4 97 70.1
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 8.0e-34 149.4 111 63.1
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 5.2e-33 146.7 142 53.5
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 8.8e-33 146.0 143 53.1
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 1.2e-32 145.6 103 63.1
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 2.0e-32 144.8 174 48.3
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 2.0e-32 144.8 139 54.7
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 1.7e-31 141.7 145 48.3
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 8.3e-31 139.4 112 57.1
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 1.1e-30 139.0 112 58.0
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 1.1e-30 139.0 166 45.2
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 1.8e-30 138.3 173 42.8
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 2.4e-30 137.9 95 65.3
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 4.1e-30 137.1 110 57.3
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 4.1e-30 137.1 110 57.3
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 1.2e-29 135.6 125 54.4
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 2.7e-29 134.4 165 45.5
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 2.7e-29 134.4 178 43.8
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 7.7e-29 132.9 168 43.5
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 7.7e-29 132.9 159 46.5
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 1.0e-28 132.5 168 42.3
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.3e-28 132.1 168 42.9
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.3e-28 132.1 168 42.9
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 1.7e-28 131.7 168 42.9
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 2.3e-28 131.3 173 42.2
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 1.1e-27 129.0 130 48.5
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 1.5e-27 128.6 113 51.3
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 5.5e-27 126.7 166 45.2
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 8.0e-26 122.9 124 46.0
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 2.3e-25 121.3 111 55.0
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 4.0e-25 120.6 132 48.5
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 6.8e-25 119.8 97 62.9
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 6.8e-25 119.8 212 34.9
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.0e-24 118.2 128 48.4
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 1.7e-23 115.2 75 69.3
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 1.7e-23 115.2 169 40.8
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.7e-23 115.2 111 51.4
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 2.2e-23 114.8 111 51.4
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 2.8e-23 114.4 166 40.4
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 3.7e-23 114.0 170 41.8
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 6.3e-23 113.2 157 43.9
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 2.4e-22 111.3 171 39.2
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 2.0e-21 108.2 136 41.9
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 4.5e-21 107.1 69 69.6
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 7.8e-21 106.3 112 47.3
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 7.8e-21 106.3 140 40.0
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 1.0e-20 105.9 124 47.6
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 1.3e-20 105.5 169 37.3
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 3.9e-20 104.0 74 62.2
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 6.6e-20 103.2 75 60.0
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 8.6e-20 102.8 121 42.1
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 5.6e-19 100.1 118 44.9
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 4.7e-18 97.1 103 47.6
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 8.0e-18 96.3 110 43.6
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 3.1e-17 94.4 131 35.9
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 5.2e-17 93.6 112 42.9
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 5.2e-17 93.6 81 53.1
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 6.8e-17 93.2 112 42.9
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 8.9e-17 92.8 110 44.5
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 1.3e-15 89.0 99 48.5
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 2.9e-15 87.8 75 53.3
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 3.7e-15 87.4 134 38.1
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 4.9e-15 87.0 134 38.1
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 1.4e-14 85.5 115 40.0
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 4.1e-14 84.0 69 60.9
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 4.6e-13 80.5 213 29.1
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 4.6e-13 80.5 75 53.3
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 6.8e-09 66.6 136 34.6
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 6.8e-09 66.6 136 34.6
COL.COLO4_15482 Corchorus olitorius HOM05D007620 ORTHO05D009568 1.2e-08 65.9 46 65.2
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 2.0e-08 65.1 44 63.6
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.4e-08 64.3 86 43.0
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 4.4e-08 63.9 85 42.4
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 5.8e-08 63.5 43 65.1
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 9.8e-08 62.8 86 37.2
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 1.7e-07 62.0 43 60.5
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 3.7e-07 60.8 43 62.8
TAR629G0629 Trochodendron aralioides HOM05D007956 ORTHO05D010152 8.3e-07 59.7 95 33.7
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 5.4e-06 57.0 93 32.3


User provided reference genes

Program Settings