Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 2.7e-275 951.4 501 100.0
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 3.3e-196 688.7 524 74.0
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 1.6e-195 686.4 492 76.4
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 5.2e-194 681.4 510 75.5
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 6.4e-192 674.5 513 73.7
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 1.0e-125 454.5 509 54.0
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 1.8e-125 453.8 512 53.7
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 2.3e-125 453.4 510 51.4
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 1.8e-122 443.7 500 52.4
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 7.0e-122 441.8 497 53.3
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 7.0e-122 441.8 507 51.9
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 3.8e-120 436.0 514 51.4
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 3.8e-120 436.0 514 51.4
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 6.5e-120 435.3 507 51.5
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.9e-119 433.7 506 51.2
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.2e-118 431.0 509 51.9
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.1e-118 430.3 484 52.7
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 4.7e-118 429.1 515 50.5
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 1.8e-117 427.2 490 53.1
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 6.7e-117 425.2 507 51.5
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 1.2e-116 424.5 491 54.4
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 5.7e-116 422.2 513 50.1
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.8e-114 417.2 504 51.4
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 5.0e-112 409.1 486 49.8
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 6.5e-112 408.7 485 52.0
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 2.5e-111 406.8 486 49.6
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 3.2e-111 406.4 489 50.9
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 9.4e-111 404.8 485 49.1
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 9.4e-111 404.8 508 49.6
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 4.7e-110 402.5 510 50.8
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.0e-109 401.4 508 50.8
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.3e-109 400.2 486 49.6
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 4.0e-109 399.4 486 49.0
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 7.5e-108 395.2 508 50.2
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 7.5e-108 395.2 536 50.4
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 2.8e-107 393.3 518 49.6
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 2.8e-107 393.3 518 49.6
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 7.0e-106 388.7 513 48.0
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 1.6e-105 387.5 498 50.4
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 7.7e-105 385.2 518 48.8
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 7.7e-105 385.2 503 47.9
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.3e-104 384.4 511 48.9
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 1.3e-104 384.4 504 48.4
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 1.7e-104 384.0 491 50.3
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 2.3e-104 383.6 501 49.7
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 5.0e-104 382.5 492 50.4
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 6.6e-104 382.1 508 49.2
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 7.2e-103 378.6 502 49.0
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 1.6e-102 377.5 521 48.6
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 1.6e-102 377.5 522 47.7
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 1.8e-101 374.0 497 49.5
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 2.3e-101 373.6 500 48.4
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 2.3e-101 373.6 498 48.2
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 6.3e-99 365.5 504 48.0
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 3.5e-97 359.8 487 45.8
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 1.3e-96 357.8 495 47.7
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 3.3e-95 353.2 516 46.7
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 5.6e-95 352.4 487 45.0
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.4e-93 347.8 488 44.5
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 2.3e-93 347.1 484 43.8
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 6.8e-93 345.5 462 48.5
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 4.4e-92 342.8 471 49.3
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 4.9e-91 339.3 489 43.6
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 3.2e-90 336.7 515 44.1
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 1.0e-88 331.6 530 44.2
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 3.9e-88 329.7 528 42.0
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 6.6e-88 328.9 515 41.9
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.1e-87 328.2 512 42.4
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.5e-87 327.8 496 45.0
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.9e-87 327.4 516 42.8
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 5.6e-87 325.9 413 48.7
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 1.6e-86 324.3 495 43.6
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 2.8e-86 323.6 482 45.9
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 3.6e-86 323.2 492 44.1
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 2.0e-84 317.4 520 40.6
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 2.1e-81 307.4 515 41.2
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 3.5e-81 306.6 494 42.7
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 4.6e-81 306.2 535 41.7
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 2.3e-80 303.9 518 39.4
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 2.5e-79 300.4 492 42.9
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 9.5e-79 298.5 497 41.0
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 8.1e-78 295.4 489 42.5
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 8.1e-78 295.4 495 42.2
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 1.8e-77 294.3 494 42.1
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.4e-76 290.0 478 42.1
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 7.6e-76 288.9 502 40.4
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 2.2e-75 287.3 472 43.0
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 1.4e-74 284.6 502 41.8
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.7e-72 277.7 482 40.9
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 1.2e-70 271.6 507 40.2
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 3.1e-69 266.9 523 39.6
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 8.4e-67 258.8 519 38.3
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 7.1e-66 255.8 498 40.0
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 3.5e-65 253.4 501 40.1
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 1.7e-64 251.1 496 40.5
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 5.1e-64 249.6 446 41.0
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 4.0e-61 240.0 508 37.0
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 4.9e-59 233.0 508 38.0
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 2.4e-58 230.7 505 37.4
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 9.3e-58 228.8 508 36.2
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 1.6e-57 228.0 505 37.2
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 1.3e-56 224.9 476 37.8
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 5.1e-56 223.0 444 37.2
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 1.3e-51 208.4 445 38.7
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 1.4e-50 204.9 502 35.9
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 1.4e-50 204.9 502 35.9
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 1.2e-49 201.8 484 36.6
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 6.0e-49 199.5 481 34.7
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 1.0e-48 198.7 500 34.8
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 4.0e-45 186.8 367 40.1
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 4.0e-45 186.8 495 34.1
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 2.0e-44 184.5 419 36.5
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 1.3e-43 181.8 447 33.6
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 4.9e-43 179.9 448 34.4
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 2.3e-40 171.0 173 54.3
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 6.9e-37 159.5 136 63.2
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 1.3e-35 155.2 282 42.9
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 1.8e-32 144.8 111 64.9
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 4.3e-31 140.2 388 31.7
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 1.6e-30 138.3 130 55.4
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 1.1e-29 135.6 182 47.3
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.8e-29 134.8 111 61.3
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 4.2e-26 123.6 129 55.8
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 2.5e-23 114.4 95 56.8
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 2.9e-19 100.9 332 32.2
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.4e-16 92.0 102 44.1
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.4e-16 92.0 431 28.3
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 2.3e-16 91.3 131 45.0
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 7.4e-15 86.3 546 26.7
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 6.5e-11 73.2 64 59.4
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 8.5e-11 72.8 314 29.3
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 4.2e-10 70.5 67 49.3
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 6.7e-08 63.2 102 37.3
Oeu059752.1 Olea europaea HOM05D004806 ORTHO05D005397 1.5e-07 62.0 120 35.0


User provided reference genes

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