Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 1.9e-114 416.0 227 100.0
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 3.3e-71 272.3 237 72.6
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 6.9e-61 238.0 235 60.4
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 2.7e-57 226.1 242 57.9
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 3.0e-56 222.6 243 58.4
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 3.2e-26 122.9 269 37.9
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 1.6e-25 120.6 268 38.4
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 2.4e-21 106.7 262 35.9
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 4.1e-21 105.9 255 36.5
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 5.4e-21 105.5 241 34.4
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 5.4e-21 105.5 262 35.9
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 1.6e-20 104.0 258 34.1
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.7e-19 100.5 265 33.2
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.9e-19 99.8 260 37.3
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.9e-19 99.8 264 34.5
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 6.6e-19 98.6 265 33.2
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.1e-18 97.8 266 34.2
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.9e-18 97.1 232 35.3
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 2.5e-18 96.7 259 34.0
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.1e-17 93.6 260 34.2
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 2.1e-17 93.6 227 36.1
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 2.8e-17 93.2 221 44.3
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 6.1e-17 92.0 259 32.0
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 1.0e-16 91.3 261 34.5
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.0e-16 91.3 260 33.8
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 1.4e-16 90.9 264 33.3
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 3.0e-16 89.7 250 34.8
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 4.0e-16 89.4 249 32.1
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 5.2e-16 89.0 268 32.8
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 6.8e-16 88.6 232 36.2
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.2e-15 87.8 257 31.5
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.5e-15 87.4 251 34.7
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.5e-15 87.4 251 34.7
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.5e-15 85.1 244 33.6
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.3e-14 84.3 258 32.2
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 2.9e-14 83.2 243 32.1
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.7e-14 82.8 241 32.4
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 3.7e-14 82.8 257 33.1
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 4.9e-14 82.4 234 32.1
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 6.4e-14 82.0 237 36.3
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 1.1e-13 81.3 230 33.0
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 1.4e-13 80.9 255 37.3
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 2.4e-13 80.1 211 34.6
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 5.4e-13 79.0 215 38.6
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 5.4e-13 79.0 240 31.7
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 5.4e-13 79.0 240 31.7
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 9.2e-13 78.2 243 31.7
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 4.6e-12 75.9 249 32.9
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 4.6e-12 75.9 232 31.5
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 4.6e-12 75.9 259 31.3
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 1.3e-11 74.3 257 28.8
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 2.3e-11 73.6 246 30.1
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 2.3e-11 73.6 251 28.3
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 6.6e-11 72.0 223 33.6
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.1e-10 71.2 259 30.1
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 1.5e-10 70.9 237 29.5
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.5e-10 70.1 170 31.8
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 2.5e-10 70.1 229 35.8
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.3e-10 69.7 209 32.5
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 3.3e-10 69.7 277 29.6
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 7.3e-10 68.6 258 30.6
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 7.3e-10 68.6 223 29.1
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.2e-09 67.8 269 30.1
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.6e-09 67.4 230 30.4
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 2.1e-09 67.0 237 28.7
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 6.2e-09 65.5 231 32.9
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.4e-08 64.3 214 39.3
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 4.0e-08 62.8 164 31.7
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 4.0e-08 62.8 217 31.8
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 4.0e-08 62.8 186 29.6
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 6.8e-08 62.0 263 28.9
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 1.2e-07 61.2 262 30.9
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 1.5e-07 60.8 291 31.3
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 2.0e-07 60.5 233 30.0
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 2.0e-07 60.5 239 36.0
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 2.6e-07 60.1 170 32.9
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 5.8e-07 58.9 180 31.1
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 9.8e-07 58.2 232 28.9
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 2.9e-06 56.6 179 30.2
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 2.9e-06 56.6 261 29.9
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 4.9e-06 55.8 205 39.5
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 4.9e-06 55.8 228 37.3
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 6.4e-06 55.5 256 27.7


User provided reference genes

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