Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010702 Sechium edule HOM05D007721 ORTHO05D009811 2.1e-39 165.2 83 100.0
MELO3C014581.2 Cucumis melo HOM05D007721 ORTHO05D009811 4.7e-31 137.5 83 80.7
Oeu013174.2 Olea europaea HOM05D007721 ORTHO05D009811 1.2e-23 112.8 74 74.3
Migut.D01985 Erythranthe guttata HOM05D007721 ORTHO05D009811 2.1e-23 112.1 71 74.6
QL01p004762 Quercus lobata HOM05D007721 ORTHO05D009811 3.6e-23 111.3 70 74.3
QL01p004062 Quercus lobata HOM05D007721 ORTHO05D009811 8.0e-23 110.2 70 72.9
CiPaw.14G116700 Carya illinoinensis HOM05D007721 ORTHO05D009811 1.0e-22 109.8 71 71.8
Prupe.1G174200 Prunus persica HOM05D007721 ORTHO05D009811 4.0e-22 107.8 71 77.5
SalBow6G6016 Salvia bowleyana HOM05D007721 ORTHO05D009811 6.7e-22 107.1 70 78.6
Eucgr.J00742 Eucalyptus grandis HOM05D007721 ORTHO05D009811 8.8e-22 106.7 81 65.4
SalBow6G6561 Salvia bowleyana HOM05D007721 ORTHO05D009811 1.1e-21 106.3 70 77.1
Lj3g0008015 Lotus japonicus HOM05D007721 ORTHO05D009811 1.5e-21 105.9 71 71.8
Actinidia06926 Actinidia chinensis HOM05D007721 ORTHO05D009811 3.3e-21 104.8 71 70.4
CSS0018729 Camellia sinensis var. sinensis HOM05D007721 ORTHO05D009811 3.3e-21 104.8 71 74.6
Hma1.2p1_0591F.1_g185200 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 3.3e-21 104.8 71 74.6
Ciclev10017339m.g Citrus clementina HOM05D007721 ORTHO05D009811 4.4e-21 104.4 71 76.1
FAN12G3598 Fragaria x ananassa HOM05D007721 ORTHO05D009811 4.4e-21 104.4 64 78.1
MD04G1023900 Malus domestica HOM05D007721 ORTHO05D009811 4.4e-21 104.4 64 81.2
Manes.06G162100 Manihot esculenta HOM05D007721 ORTHO05D009811 4.4e-21 104.4 71 77.5
Hma1.2p1_0055F.1_g031440 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 5.7e-21 104.0 71 73.2
FAN17G1673 Fragaria x ananassa HOM05D007721 ORTHO05D009811 9.7e-21 103.2 64 76.6
GSVIVG01031536001 Vitis vinifera HOM05D007721 ORTHO05D009811 9.7e-21 103.2 71 73.2
RcHm_v2.0_Chr4g0411561 Rosa chinensis HOM05D007721 ORTHO05D009811 1.3e-20 102.8 71 71.8
unitig_746.g26884 Utricularia gibba HOM05D007721 ORTHO05D009811 1.7e-20 102.4 71 69.0
Solyc10g079920.2 Solanum lycopersicum HOM05D007721 ORTHO05D009811 2.2e-20 102.1 74 66.2
Sopen10g030540 Solanum pennellii HOM05D007721 ORTHO05D009811 2.2e-20 102.1 74 66.2
FAN07G1724 Fragaria x ananassa HOM05D007721 ORTHO05D009811 2.8e-20 101.7 64 76.6
Nitab4.5_0000677g0250 Nicotiana tabacum HOM05D007721 ORTHO05D009811 3.7e-20 101.3 73 65.8
ECA236G4835 Erigeron canadensis HOM05D007721 ORTHO05D009811 6.3e-20 100.5 71 70.4
Peaxi162Scf00069g00105 Petunia axillaris HOM05D007721 ORTHO05D009811 8.2e-20 100.1 74 64.9
arahy.Tifrunner.gnm1.ann1.MV9AMF Arachis hypogaea HOM05D007721 ORTHO05D009811 1.1e-19 99.8 71 63.4
arahy.Tifrunner.gnm1.ann1.S4R3T1 Arachis hypogaea HOM05D007721 ORTHO05D009811 1.1e-19 99.8 71 63.4
Ah.06g193880 Amaranthus hybridus HOM05D007721 ORTHO05D009811 1.8e-19 99.0 71 70.4
Nn7g36378 Nelumbo nucifera HOM05D007721 ORTHO05D009811 1.8e-19 99.0 71 71.8
Phvul.010G051900 Phaseolus vulgaris HOM05D007721 ORTHO05D009811 1.8e-19 99.0 70 70.0
Potri.009G050900 Populus trichocarpa HOM05D007721 ORTHO05D009811 3.1e-19 98.2 72 70.8
CARHR200650 Cardamine hirsuta HOM05D007721 ORTHO05D009811 4.1e-19 97.8 71 69.0
Thecc.09G239100 Theobroma cacao HOM05D007721 ORTHO05D009811 4.1e-19 97.8 71 70.4
TPR.G33115 Trifolium pratense HOM05D004530 ORTHO05D009811 5.3e-19 97.4 71 64.8
Nitab4.5_0000937g0060 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.2e-18 96.3 72 62.5
Gohir.A07G123300 Gossypium hirsutum HOM05D007721 ORTHO05D009811 2.0e-18 95.5 71 67.6
Lalb_Chr07g0195541 Lupinus albus HOM05D007721 ORTHO05D009811 3.5e-18 94.7 71 66.2
Medtr7g102340 Medicago truncatula HOM05D007721 ORTHO05D009811 4.5e-18 94.4 71 63.4
Potri.012G127000 Populus trichocarpa HOM05D007721 ORTHO05D009811 4.5e-18 94.4 71 70.4
Gohir.A05G070100 Gossypium hirsutum HOM05D007721 ORTHO05D009811 5.9e-18 94.0 71 66.2
Zm00001eb141680 Zea mays HOM05D007721 ORTHO05D009811 5.9e-18 94.0 64 64.1
Glyma.03G114000 Glycine max HOM05D007721 ORTHO05D009811 7.7e-18 93.6 70 67.1
FAN22G0179 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.0e-17 93.2 85 60.0
Carub.0006s1099 Capsella rubella HOM05D007721 ORTHO05D009811 1.3e-17 92.8 71 66.2
Os01g0939000 Oryza sativa ssp. japonica HOM05D007721 ORTHO05D009811 1.3e-17 92.8 78 59.0
Sp6g31180 Schrenkiella parvula HOM05D007721 ORTHO05D009811 1.3e-17 92.8 70 64.3
A10p25380 Brassica napus HOM05D007721 ORTHO05D009811 1.7e-17 92.4 71 63.4
Lsat_1_v5_gn_8_56740 Lactuca sativa HOM05D007721 ORTHO05D009811 1.7e-17 92.4 71 67.6
SEGI_08983 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 1.7e-17 92.4 71 67.6
SEGI_33053 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 1.7e-17 92.4 71 67.6
Gorai.001G137300 Gossypium raimondii HOM05D007721 ORTHO05D009811 2.2e-17 92.0 71 64.8
Cc01_g05050 Coffea canephora HOM05D007721 ORTHO05D009811 1.9e-16 89.0 71 66.2
Nitab4.5_0000562g0070 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.9e-16 89.0 69 62.3
Dinv09950 Davidia involucrata HOM05D007721 ORTHO05D009811 1.2e-15 86.3 74 62.2
AL6G23280 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 2.7e-15 85.1 56 73.2
AL6G23350 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 2.7e-15 85.1 56 73.2
AagrBONN_evm.TU.Sc2ySwM_362.695 Anthoceros agrestis HOM05D007721 ORTHO05D009811 6.1e-15 84.0 71 60.6
BraA03t10703Z Brassica rapa HOM05D007721 ORTHO05D009811 6.1e-15 84.0 72 56.9
A03p14040 Brassica napus HOM05D007721 ORTHO05D009811 1.4e-14 82.8 72 56.9
A02p19730 Brassica napus HOM05D007721 ORTHO05D009811 1.8e-14 82.4 72 56.9
C02p32350 Brassica napus HOM05D007721 ORTHO05D009811 1.8e-14 82.4 72 56.9
Mapoly0048s0062 Marchantia polymorpha HOM05D007721 ORTHO05D009811 4.0e-14 81.3 71 50.7
BcaC03g15544 Brassica carinata HOM05D007721 ORTHO05D009811 8.8e-14 80.1 72 55.6
C03p16480 Brassica napus HOM05D007721 ORTHO05D009811 8.8e-14 80.1 72 55.6
BolC3t14068H Brassica oleracea HOM05D001160 ORTHO05D001092 1.2e-13 79.7 72 55.6
BcaB05g24889 Brassica carinata HOM05D007721 ORTHO05D009811 1.5e-13 79.3 72 55.6
BcaC01g06369 Brassica carinata HOM05D007721 ORTHO05D009811 4.4e-13 77.8 72 54.2
vmacro04125 Vaccinium macrocarpon HOM05D007721 ORTHO05D009811 4.4e-13 77.8 56 73.2
BraA02t07009Z Brassica rapa HOM05D007721 ORTHO05D009811 7.5e-13 77.0 72 54.2
Sc08g0006390 Simmondsia chinensis HOM05D007721 ORTHO05D009811 9.8e-13 76.6 75 56.0
Thhalv10015165m.g Eutrema salsugineum HOM05D007721 ORTHO05D009811 4.8e-12 74.3 72 55.6
Carub.0008s1583 Capsella rubella HOM05D007721 ORTHO05D009811 2.0e-10 68.9 71 52.1
TAR623G1786 Trochodendron aralioides HOM05D007721 ORTHO05D009811 1.0e-09 66.6 56 62.5
DCAR_024676 Daucus carota HOM05D007721 ORTHO05D009811 4.0e-06 54.7 60 48.3


User provided reference genes

Program Settings