Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 4.3e-267 924.1 470 100.0
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 1.6e-245 852.4 464 91.8
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 2.5e-206 722.2 468 81.4
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 1.2e-195 686.8 469 73.1
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 1.2e-192 676.8 465 71.8
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 1.6e-192 676.4 462 72.3
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 2.7e-192 675.6 463 71.9
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 3.0e-191 672.2 451 74.9
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 6.6e-191 671.0 457 73.1
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 2.5e-190 669.1 467 70.7
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 4.3e-190 668.3 470 71.3
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 6.2e-189 664.5 464 71.3
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 1.8e-188 662.9 459 70.4
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 4.0e-188 661.8 456 70.6
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 1.5e-187 659.8 459 71.2
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 4.4e-187 658.3 454 73.1
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 7.6e-187 657.5 450 71.6
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 1.4e-185 653.3 461 72.0
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 4.2e-185 651.7 456 70.4
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.1e-184 649.4 454 71.8
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 2.7e-184 649.0 467 69.2
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 2.3e-183 646.0 459 70.4
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 5.1e-183 644.8 463 69.3
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 3.3e-182 642.1 461 69.6
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.6e-181 639.8 533 63.2
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.6e-181 638.6 454 69.2
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 6.2e-181 637.9 454 69.2
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 2.4e-180 636.0 462 68.4
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 2.4e-180 636.0 462 68.4
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 3.1e-180 635.6 465 67.7
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 5.3e-180 634.8 473 72.5
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 1.4e-177 626.7 467 67.0
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.3e-175 620.2 463 67.4
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 1.3e-175 620.2 461 68.8
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 2.3e-175 619.4 464 66.6
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 8.7e-175 617.5 460 67.0
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 1.1e-174 617.1 512 62.5
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 4.3e-174 615.1 456 67.1
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 1.6e-173 613.2 475 65.3
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 8.1e-173 610.9 456 67.8
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 4.0e-172 608.6 463 66.3
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 6.9e-172 607.8 463 66.1
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 1.2e-171 607.1 463 66.7
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 2.6e-171 605.9 453 65.1
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 7.6e-171 604.4 460 64.8
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 1.1e-169 600.5 459 65.8
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 1.4e-169 600.1 445 66.7
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.5e-168 595.5 460 64.6
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 1.8e-167 593.2 433 68.6
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 3.9e-167 592.0 556 57.2
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 1.9e-166 589.7 465 64.1
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 2.5e-166 589.3 453 64.0
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 5.6e-166 588.2 456 64.9
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 2.8e-165 585.9 457 62.1
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 8.2e-165 584.3 459 63.0
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 1.4e-164 583.6 453 63.1
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 9.0e-164 580.9 459 64.1
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 2.0e-163 579.7 455 62.9
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 3.4e-163 578.9 425 67.1
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 4.5e-163 578.6 453 63.1
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 8.4e-162 574.3 453 62.5
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 1.4e-161 573.5 451 62.1
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 3.2e-161 572.4 447 62.9
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 3.2e-161 572.4 449 62.4
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 4.6e-160 568.5 451 61.9
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 4.6e-160 568.5 451 61.9
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 1.0e-159 567.4 451 61.6
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.5e-158 563.5 451 61.4
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 3.3e-158 562.4 451 61.2
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 5.7e-158 561.6 461 61.2
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 7.4e-158 561.2 453 60.7
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 7.4e-158 561.2 454 62.1
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 9.7e-158 560.8 453 61.6
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 4.8e-157 558.5 441 63.7
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 1.8e-156 556.6 453 60.3
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 1.8e-156 556.6 453 60.3
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 4.1e-156 555.4 453 60.0
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 6.9e-156 554.7 453 59.8
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 9.0e-156 554.3 456 60.7
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 1.5e-155 553.5 397 68.5
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 3.4e-155 552.4 474 58.0
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 7.7e-155 551.2 453 60.0
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 7.7e-155 551.2 437 65.0
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.9e-153 546.6 464 58.0
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 1.6e-152 543.5 452 57.7
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.0e-151 539.3 397 67.5
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 3.7e-149 532.3 383 68.7
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 5.3e-148 528.5 429 60.1
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 3.6e-144 515.8 390 64.4
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 6.1e-144 515.0 390 66.9
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 1.1e-142 510.8 459 56.2
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 3.3e-134 482.6 396 61.1
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 3.6e-128 462.6 458 54.6
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 1.2e-123 447.6 332 65.7
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 6.3e-117 425.2 313 66.8
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 3.1e-116 422.9 310 69.0
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 2.3e-114 416.8 399 51.1
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 3.8e-114 416.0 311 64.6
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.5e-97 360.9 312 59.0
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.0e-90 338.2 270 63.3
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.0e-90 338.2 270 63.3
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 1.2e-83 314.7 453 41.1
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 2.8e-72 276.9 368 41.0
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.3e-66 257.3 209 62.2
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 1.9e-65 254.2 215 59.1
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 6.2e-64 249.2 183 68.3
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 1.1e-41 175.3 112 76.8
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 2.6e-25 120.9 91 65.9
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 1.6e-14 85.1 68 61.8
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 1.7e-13 81.6 68 60.3
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 2.3e-10 71.2 80 47.5


User provided reference genes

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