Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 8.5e-236 820.1 455 100.0
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 9.9e-176 620.5 456 80.5
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 5.5e-174 614.8 456 79.6
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 1.8e-169 599.7 473 74.6
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 2.2e-130 469.9 479 61.8
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 2.8e-130 469.5 479 59.5
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 4.8e-130 468.8 416 66.6
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 8.2e-130 468.0 482 60.4
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 9.1e-129 464.5 464 62.7
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 1.2e-128 464.2 476 61.8
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.2e-127 459.9 413 66.8
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 8.5e-127 458.0 403 68.2
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 1.9e-126 456.8 487 60.8
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 1.9e-126 456.8 412 67.7
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 2.5e-126 456.4 454 63.0
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 4.2e-126 455.7 475 58.3
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 4.2e-126 455.7 406 65.8
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 5.5e-126 455.3 457 60.2
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 1.6e-125 453.8 420 65.2
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.7e-125 453.0 454 60.8
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 3.6e-125 452.6 478 62.6
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 1.4e-124 450.7 477 60.6
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 2.3e-124 449.9 413 67.1
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 3.0e-124 449.5 418 64.4
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 5.2e-124 448.7 481 59.7
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 6.8e-124 448.4 413 66.6
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 1.2e-123 447.6 437 62.7
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 2.0e-123 446.8 412 65.3
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 2.0e-123 446.8 482 58.3
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 5.7e-123 445.3 424 61.8
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 7.5e-123 444.9 468 60.7
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 2.2e-122 443.4 455 62.4
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 3.7e-122 442.6 464 61.4
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 5.4e-121 438.7 446 59.9
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 9.1e-121 438.0 475 57.9
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 2.0e-120 436.8 407 64.9
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 3.5e-120 436.0 411 63.7
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 5.9e-120 435.3 421 63.4
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 5.9e-120 435.3 409 64.3
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.9e-119 433.0 467 61.0
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 5.0e-119 432.2 491 55.4
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 1.5e-118 430.6 476 60.7
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 9.5e-118 427.9 469 61.8
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 2.8e-117 426.4 483 59.2
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 3.6e-117 426.0 448 62.9
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 6.1e-117 425.2 428 60.0
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 8.0e-117 424.9 484 57.4
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 1.0e-116 424.5 447 61.5
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 1.4e-116 424.1 418 64.6
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 1.8e-116 423.7 491 58.7
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 5.7e-115 418.7 404 64.6
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 3.7e-114 416.0 480 59.0
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 3.7e-114 416.0 480 59.0
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 4.9e-114 415.6 403 65.3
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 3.1e-113 412.9 423 62.9
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 4.1e-113 412.5 377 68.2
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 7.0e-113 411.8 403 62.0
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 7.0e-113 411.8 402 64.2
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.2e-112 411.0 413 63.4
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 2.0e-112 410.2 470 58.7
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 2.7e-112 409.8 466 58.4
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 3.5e-112 409.5 410 62.9
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 4.5e-112 409.1 483 55.5
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 5.9e-112 408.7 471 58.2
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 7.8e-112 408.3 468 58.5
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 1.7e-111 407.1 380 65.5
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 2.9e-111 406.4 407 64.1
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 5.0e-111 405.6 490 56.5
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 1.5e-110 404.1 416 61.5
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 1.5e-110 404.1 655 47.5
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 7.3e-110 401.7 404 61.6
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 1.6e-109 400.6 450 57.1
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 2.8e-109 399.8 469 58.2
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 2.8e-109 399.8 404 62.9
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 4.7e-109 399.1 406 63.8
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 8.0e-109 398.3 431 59.2
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 4.0e-108 396.0 494 54.9
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 7.5e-107 391.7 466 56.9
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 2.2e-106 390.2 402 64.2
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 5.4e-105 385.6 474 57.4
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 4.6e-104 382.5 432 56.2
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 1.0e-103 381.3 406 62.1
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 1.0e-103 381.3 385 60.8
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 3.9e-103 379.4 431 58.0
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 5.0e-103 379.0 463 57.5
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 1.2e-101 374.4 400 57.8
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 4.3e-94 349.4 350 63.4
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 4.3e-94 349.4 371 56.9
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 3.6e-93 346.3 469 54.8
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 9.9e-91 338.2 456 49.1
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 9.9e-91 338.2 456 49.1
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 8.3e-90 335.1 420 52.6
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 8.3e-90 335.1 438 52.7
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 2.4e-89 333.6 372 58.6
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 7.8e-88 328.6 280 67.1
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 5.1e-87 325.9 284 65.8
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 3.3e-86 323.2 402 51.7
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 1.5e-83 314.3 282 66.0
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 4.4e-83 312.8 405 56.8
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 3.9e-79 299.7 323 57.3
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 1.9e-78 297.4 297 59.9
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 9.6e-78 295.0 266 66.2
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 6.9e-76 288.9 283 63.6
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 5.4e-73 279.3 628 38.9
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 1.6e-72 277.7 332 53.0
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 2.7e-72 276.9 403 47.9
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 1.7e-71 274.2 304 58.9
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 3.6e-69 266.5 311 56.9
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 4.2e-65 253.1 375 47.5
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 3.9e-63 246.5 203 67.0
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 2.4e-60 237.3 313 51.4
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 2.6e-59 233.8 405 47.9
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 3.1e-52 210.3 255 59.2
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 9.0e-52 208.8 262 54.6
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 8.2e-45 185.7 551 34.1
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 2.9e-34 150.6 102 75.5
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 1.4e-33 148.3 354 32.8
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 4.2e-33 146.7 198 50.5
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 7.2e-33 146.0 103 78.6
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 9.7e-30 135.6 303 42.9
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.1e-28 132.1 119 65.5
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 1.4e-28 131.7 87 79.3
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 5.5e-25 119.8 77 75.3
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 5.7e-22 109.8 61 82.0
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.3e-21 108.6 130 64.6
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 1.7e-21 108.2 96 75.0
FAN12G0241 Fragaria x ananassa HOM05D005481 ORTHO05D006779 5.3e-20 103.2 87 65.5
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 3.5e-19 100.5 80 65.0
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 1.3e-18 98.6 92 75.0
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 5.2e-15 86.7 165 41.8
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 6.3e-13 79.7 96 53.1
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.8e-12 78.2 64 64.1
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 1.5e-09 68.6 173 30.6
C06p31420 Brassica napus HOM05D005481 ORTHO05D006779 1.2e-08 65.5 91 47.3
HanXRQChr16g0527591 Helianthus annuus HOM05D005481 ORTHO05D006779 2.7e-08 64.3 47 70.2
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 6.1e-08 63.2 88 45.5
SEGI_02848 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 5.7e-06 56.6 39 69.2


User provided reference genes

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