Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 9.2e-133 476.9 235 100.0
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 2.4e-104 382.5 244 82.8
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 2.6e-103 379.0 241 82.6
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 3.3e-90 335.5 243 74.9
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 7.4e-90 334.3 239 73.2
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 2.8e-89 332.4 235 74.0
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 1.1e-88 330.5 240 73.8
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.8e-88 329.7 239 72.0
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 1.8e-88 329.7 239 72.0
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 2.4e-88 329.3 244 73.0
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 2.4e-88 329.3 242 71.9
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 4.0e-88 328.6 246 72.0
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 5.3e-88 328.2 248 71.4
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.5e-87 326.6 235 72.3
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 2.0e-87 326.2 238 71.8
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 5.8e-87 324.7 226 73.5
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 9.9e-87 323.9 245 73.1
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 1.3e-86 323.6 263 68.8
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 2.2e-86 322.8 249 70.3
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 2.9e-86 322.4 247 71.7
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 1.1e-85 320.5 249 69.1
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 1.9e-85 319.7 243 72.8
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 3.2e-85 318.9 242 70.7
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.2e-85 318.9 238 73.5
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 9.3e-85 317.4 238 73.9
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 9.3e-85 317.4 242 69.4
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 2.1e-84 316.2 249 68.3
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 3.5e-84 315.5 230 71.3
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 3.5e-84 315.5 236 72.9
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.5e-84 315.5 236 72.9
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 6.0e-84 314.7 238 73.5
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 6.0e-84 314.7 238 73.5
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 1.3e-83 313.5 236 69.1
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 1.3e-83 313.5 245 71.8
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 3.9e-83 312.0 245 69.0
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 3.9e-83 312.0 246 68.3
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 5.1e-83 311.6 241 71.8
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 6.7e-83 311.2 240 66.7
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 6.7e-83 311.2 244 70.9
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 4.3e-82 308.5 250 67.6
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.3e-81 307.0 240 67.1
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.3e-81 307.0 242 70.2
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 2.8e-81 305.8 239 66.1
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 2.8e-81 305.8 239 69.5
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 2.8e-81 305.8 236 68.6
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 4.8e-81 305.1 246 66.7
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 6.2e-81 304.7 239 68.2
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 1.8e-80 303.1 202 74.8
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 3.1e-80 302.4 219 70.8
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 4.0e-80 302.0 249 67.1
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 4.0e-80 302.0 241 66.0
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 9.0e-80 300.8 240 65.4
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 2.6e-79 299.3 291 60.5
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 2.6e-79 299.3 244 66.0
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 4.5e-79 298.5 230 70.4
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 7.6e-79 297.7 243 64.2
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 2.2e-78 296.2 242 67.4
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 2.2e-78 296.2 242 67.4
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 2.2e-78 296.2 239 68.6
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 3.8e-78 295.4 246 65.4
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 4.9e-78 295.0 185 76.2
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 6.5e-78 294.7 224 69.2
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 1.1e-77 293.9 247 64.4
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 1.4e-77 293.5 239 67.4
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 1.9e-77 293.1 226 67.3
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 5.5e-77 291.6 250 64.8
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 5.5e-77 291.6 272 61.0
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 9.3e-77 290.8 240 64.2
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 2.1e-76 289.7 235 67.2
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 2.7e-76 289.3 245 62.0
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 3.5e-76 288.9 239 66.5
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 3.5e-76 288.9 239 66.5
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 4.6e-76 288.5 204 69.6
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 1.0e-75 287.3 196 73.0
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 1.3e-75 287.0 249 62.2
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 1.3e-75 287.0 235 66.8
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 2.3e-75 286.2 268 58.2
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 3.9e-75 285.4 238 66.4
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 5.1e-75 285.0 217 66.8
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 1.1e-74 283.9 160 84.4
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.5e-74 283.5 215 67.4
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 1.5e-74 283.5 199 70.9
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 1.5e-74 283.5 205 68.8
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 1.5e-74 283.5 205 68.8
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 7.4e-74 281.2 244 63.9
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 9.6e-74 280.8 224 65.2
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 3.7e-73 278.9 227 64.3
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 6.3e-73 278.1 242 62.0
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 1.4e-72 276.9 199 72.9
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.1e-72 275.4 250 60.4
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.0e-71 273.1 201 66.7
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.0e-71 273.1 201 66.7
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 5.9e-71 271.6 247 60.3
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 2.9e-70 269.2 195 67.7
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 8.4e-70 267.7 201 66.2
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 2.4e-64 249.6 166 74.1
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 2.4e-64 249.6 235 58.7
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 2.6e-63 246.1 130 91.5
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 2.1e-60 236.5 173 68.8
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 6.9e-56 221.5 197 59.9
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 5.9e-55 218.4 184 57.1
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 5.0e-54 215.3 135 76.3
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 6.5e-54 214.9 205 54.1
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 6.5e-54 214.9 184 60.3
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 9.4e-53 211.1 191 63.4
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 2.1e-52 209.9 110 90.9
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 1.3e-49 200.7 131 71.8
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 1.6e-47 193.7 187 58.8
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 3.2e-45 186.0 181 58.6
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 1.6e-44 183.7 188 58.5
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 1.3e-38 164.1 90 85.6
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.2e-34 151.0 151 60.3
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.3e-30 137.5 106 64.2
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 1.9e-29 133.7 91 68.1
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 4.9e-25 119.0 154 43.5
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.1e-24 117.9 96 66.7
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 2.7e-23 113.2 97 53.6
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 1.6e-20 104.0 57 87.7
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.3e-17 94.4 49 85.7
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 6.4e-17 92.0 56 78.6
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 9.5e-13 78.2 65 61.5
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 8.0e-12 75.1 38 81.6
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 9.2e-08 61.6 31 87.1
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 2.7e-07 60.1 36 75.0
Ca_27663_v3 Cicer arietinum L. HOM05D002033 ORTHO05D002181 6.6e-06 55.5 37 67.6


User provided reference genes

Program Settings