Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 3.9e-76 288.1 150 100.0
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 1.3e-55 219.9 148 80.4
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 3.2e-54 215.3 151 78.8
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 1.1e-38 163.7 125 75.2
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 9.0e-33 144.1 137 60.6
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 9.9e-32 140.6 131 61.8
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 1.3e-31 140.2 137 62.0
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 1.3e-31 140.2 137 62.0
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.7e-31 139.8 131 61.8
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 1.9e-30 136.3 136 59.6
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 2.4e-30 136.0 146 55.5
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 2.1e-29 132.9 127 58.3
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 3.0e-28 129.0 132 57.6
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 3.0e-28 129.0 104 67.3
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 3.9e-28 128.6 135 58.5
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 3.9e-28 128.6 132 57.6
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 5.1e-28 128.3 137 56.2
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 6.7e-28 127.9 136 54.4
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 1.1e-27 127.1 130 56.2
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 1.5e-27 126.7 131 57.3
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.3e-27 125.6 91 74.7
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 1.3e-26 123.6 137 54.0
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.6e-26 123.2 131 56.5
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 4.8e-26 121.7 137 54.0
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 4.8e-26 121.7 137 51.8
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 8.2e-26 120.9 130 56.2
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 1.4e-25 120.2 142 54.9
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 1.8e-25 119.8 130 54.6
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 5.3e-25 118.2 128 53.9
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 6.9e-25 117.9 133 54.9
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.5e-24 116.7 142 50.0
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 2.0e-24 116.3 137 51.1
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 2.0e-24 116.3 143 49.0
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.4e-24 115.5 126 56.3
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 3.4e-24 115.5 139 53.2
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 4.5e-24 115.2 95 67.4
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 4.5e-24 115.2 127 52.8
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 7.6e-24 114.4 143 49.0
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 1.3e-23 113.6 137 50.4
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.7e-23 113.2 142 49.3
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 1.7e-23 113.2 131 51.9
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 1.7e-23 113.2 135 51.1
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 2.9e-23 112.5 129 51.9
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 3.8e-23 112.1 141 48.2
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.8e-23 112.1 141 48.2
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 6.5e-23 111.3 137 52.6
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 8.4e-23 110.9 135 51.1
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 1.1e-22 110.5 92 66.3
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 3.2e-22 109.0 106 58.5
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 3.2e-22 109.0 133 48.1
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 4.2e-22 108.6 136 47.8
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 4.2e-22 108.6 134 50.7
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 4.2e-22 108.6 132 49.2
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 4.2e-22 108.6 133 48.1
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 5.5e-22 108.2 97 64.9
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 7.1e-22 107.8 137 48.9
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 7.1e-22 107.8 107 57.0
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 7.1e-22 107.8 107 57.0
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 2.7e-21 105.9 134 49.3
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 6.0e-21 104.8 134 48.5
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 6.0e-21 104.8 90 64.4
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 7.9e-21 104.4 103 62.1
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.3e-20 103.6 141 46.1
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 1.3e-20 103.6 137 48.2
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 3.9e-20 102.1 132 47.7
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 5.1e-20 101.7 137 48.9
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 7.4e-19 97.8 97 58.8
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.3e-18 97.1 90 62.2
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 1.3e-18 97.1 142 46.5
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.2e-18 96.3 129 48.8
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 2.8e-18 95.9 103 52.4
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 2.8e-18 95.9 128 47.7
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 6.3e-18 94.7 131 45.8
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 6.3e-18 94.7 74 63.5
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 4.1e-17 92.0 137 40.9
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 5.3e-17 91.7 130 43.1
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 5.3e-17 91.7 139 43.9
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 1.2e-16 90.5 101 56.4
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 1.5e-16 90.1 94 58.5
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 1.5e-16 90.1 133 48.9
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 5.9e-16 88.2 133 42.9
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 5.9e-16 88.2 141 42.6
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 1.3e-15 87.0 99 54.5
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 2.2e-15 86.3 114 49.1
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 2.2e-15 86.3 135 42.2
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 2.9e-15 85.9 132 41.7
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 8.5e-15 84.3 139 43.9
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.9e-14 83.2 93 51.6
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 1.9e-14 83.2 133 41.4
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 5.5e-14 81.6 92 54.3
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 1.2e-13 80.5 114 48.2
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 3.6e-13 79.0 132 41.7
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 4.6e-13 78.6 130 41.5
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 4.6e-13 78.6 116 47.4
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 6.1e-13 78.2 108 41.7
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 1.0e-12 77.4 139 40.3
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 3.0e-12 75.9 132 42.4
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 1.8e-09 66.6 96 45.8
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 5.3e-09 65.1 61 57.4
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 7.7e-08 61.2 100 38.0
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 1.0e-07 60.8 129 36.4
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 1.7e-07 60.1 142 33.8
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 2.2e-07 59.7 95 41.1
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 2.9e-07 59.3 93 46.2
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 3.8e-07 58.9 110 40.9
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 5.0e-07 58.5 91 42.9
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 1.9e-06 56.6 73 47.9
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 4.2e-06 55.5 85 45.9
AL5G31940 Arabidopsis lyrata HOM05D006398 ORTHO05D007983 5.5e-06 55.1 102 41.2
AUR62036260 Chenopodium quinoa HOM05D006398 ORTHO05D007983 9.4e-06 54.3 135 30.4


User provided reference genes

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