Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 1.3e-108 396.7 248 100.0
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 1.5e-69 266.9 255 63.5
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 6.4e-68 261.5 255 72.2
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 4.0e-62 242.3 265 61.1
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 8.7e-33 144.8 258 45.0
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 9.6e-32 141.4 226 40.7
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 4.8e-31 139.0 248 45.2
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 1.1e-30 137.9 248 44.8
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 1.8e-30 137.1 250 53.6
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 2.4e-30 136.7 250 43.2
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 5.3e-30 135.6 251 45.0
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 4.5e-29 132.5 266 48.5
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 7.6e-29 131.7 236 44.5
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 1.0e-28 131.3 252 43.7
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 2.9e-28 129.8 268 41.8
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 2.9e-28 129.8 257 42.4
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 6.5e-28 128.6 258 42.2
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 8.4e-28 128.3 255 42.0
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 1.4e-27 127.5 269 37.5
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 1.4e-27 127.5 260 44.6
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 1.6e-26 124.0 261 38.3
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 1.6e-26 124.0 264 39.0
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 2.1e-26 123.6 258 40.3
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 1.0e-25 121.3 251 39.0
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 3.9e-25 119.4 259 42.5
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 3.9e-25 119.4 300 34.7
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 5.1e-25 119.0 247 39.7
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.1e-24 117.9 262 41.6
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 1.5e-24 117.5 247 35.6
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 1.5e-24 117.5 256 41.0
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 1.9e-24 117.1 256 42.2
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 2.5e-24 116.7 262 46.9
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 3.3e-24 116.3 260 43.1
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 4.3e-24 115.9 243 41.2
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 7.4e-24 115.2 255 42.0
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 7.4e-24 115.2 258 40.7
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 1.3e-23 114.4 252 40.1
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 1.6e-23 114.0 245 40.0
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 4.8e-23 112.5 242 38.8
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 1.1e-22 111.3 250 38.4
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.4e-22 110.9 229 42.4
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 1.4e-22 110.9 271 38.0
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 1.4e-22 110.9 227 37.0
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 2.4e-22 110.2 264 38.3
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 2.4e-22 110.2 269 46.1
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 3.1e-22 109.8 225 42.7
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 1.5e-21 107.5 268 33.2
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 2.6e-21 106.7 252 40.1
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 2.6e-21 106.7 260 38.1
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 4.5e-21 105.9 274 40.1
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 7.7e-21 105.1 240 39.2
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 7.7e-21 105.1 250 35.6
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 1.0e-20 104.8 262 43.9
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 1.3e-20 104.4 255 42.4
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 1.7e-20 104.0 247 40.5
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 2.2e-20 103.6 278 33.5
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 2.2e-20 103.6 239 41.4
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 3.8e-20 102.8 284 38.7
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 8.5e-20 101.7 263 36.9
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.1e-19 101.3 240 37.5
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 1.9e-19 100.5 254 36.6
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 2.5e-19 100.1 270 40.0
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 4.2e-19 99.4 280 33.9
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 7.2e-19 98.6 268 32.5
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 7.2e-19 98.6 254 39.0
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 3.6e-18 96.3 243 36.6
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 4.6e-18 95.9 253 37.5
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 6.1e-18 95.5 253 37.5
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 6.1e-18 95.5 252 36.5
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 1.8e-17 94.0 253 36.8
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 3.9e-17 92.8 244 38.9
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 5.1e-17 92.4 280 31.8
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 1.5e-16 90.9 270 35.6
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 2.0e-16 90.5 275 32.0
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 2.0e-16 90.5 242 30.6
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 2.5e-16 90.1 256 38.3
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 3.3e-16 89.7 266 36.8
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.8e-15 86.7 151 38.4
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 6.3e-15 85.5 252 37.7
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 1.1e-14 84.7 235 37.9
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 1.4e-14 84.3 272 39.0
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 2.4e-14 83.6 209 43.5
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 2.4e-14 83.6 252 30.2
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 3.1e-14 83.2 143 35.7
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 3.1e-14 83.2 106 48.1
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 2.6e-13 80.1 171 35.7
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 3.4e-13 79.7 244 34.0
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 3.4e-13 79.7 148 37.8
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 4.5e-13 79.3 169 36.1
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.0e-12 78.2 346 29.2
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 2.9e-12 76.6 244 34.8
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 8.5e-12 75.1 245 35.9
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 8.5e-12 75.1 245 35.9
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.4e-11 74.3 312 31.1
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 2.5e-11 73.6 241 35.7
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.2e-11 72.8 249 35.3
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 4.7e-10 69.3 75 45.3
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 6.1e-10 68.9 46 63.0
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 3.7e-07 59.7 238 32.4
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 1.4e-06 57.8 296 26.4
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 5.3e-06 55.8 238 31.5


User provided reference genes

Program Settings