Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010431 Sechium edule HOM05D003797 ORTHO05D004370 1.9e-93 345.9 181 100.0
CsaV3_5G014530 Cucumis sativus L. HOM05D003797 ORTHO05D004370 2.3e-67 259.2 242 64.5
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 4.4e-66 255.0 242 64.5
ClCG07G005420 Citrullus lanatus HOM05D003797 ORTHO05D004370 2.2e-65 252.7 244 61.9
Manes.15G136600 Manihot esculenta HOM05D003797 ORTHO05D004370 2.7e-60 235.7 244 60.2
Potri.010G104200 Populus trichocarpa HOM05D003797 ORTHO05D004370 2.7e-60 235.7 238 59.7
CiPaw.06G054700 Carya illinoinensis HOM05D003797 ORTHO05D004370 3.6e-60 235.3 236 60.6
PGR102G0637 Punica granatum HOM05D003797 ORTHO05D004370 8.0e-60 234.2 238 58.0
TWI74G1086 Tripterygium wilfordii HOM05D003797 ORTHO05D004370 1.0e-59 233.8 239 59.4
Duzib251G0134 Durio zibethinus HOM05D003797 ORTHO05D004370 1.8e-59 233.0 236 59.3
Medtr8g105790 Medicago truncatula HOM05D003797 ORTHO05D004370 3.0e-59 232.3 237 57.8
A02p32320 Brassica napus HOM05D003797 ORTHO05D004370 4.0e-59 231.9 245 55.9
C02p49920 Brassica napus HOM05D003797 ORTHO05D004370 4.0e-59 231.9 245 55.9
BolC2t11071H Brassica oleracea HOM05D003797 ORTHO05D004370 4.0e-59 231.9 245 55.9
BraA02t08249Z Brassica rapa HOM05D003797 ORTHO05D004370 4.0e-59 231.9 245 55.9
Nitab4.5_0003619g0020 Nicotiana tabacum HOM05D003797 ORTHO05D004370 5.2e-59 231.5 233 59.2
BcaB07g30374 Brassica carinata HOM05D003797 ORTHO05D004370 6.7e-59 231.1 248 55.2
COL.COLO4_27615 Corchorus olitorius HOM05D003797 ORTHO05D004370 8.8e-59 230.7 238 58.4
CANSAT78G0734 Cannabis sativa HOM05D003797 ORTHO05D004370 1.2e-58 230.3 240 57.5
RcHm_v2.0_Chr4g0442611 Rosa chinensis HOM05D003797 ORTHO05D004370 1.2e-58 230.3 236 60.2
BcaC03g17074 Brassica carinata HOM05D003797 ORTHO05D004370 1.5e-58 229.9 245 55.5
Thhalv10005591m.g Eutrema salsugineum HOM05D003797 ORTHO05D004370 1.5e-58 229.9 241 56.4
arahy.Tifrunner.gnm1.ann1.2L3ISV Arachis hypogaea HOM05D003797 ORTHO05D004370 2.6e-58 229.2 237 57.8
arahy.Tifrunner.gnm1.ann1.Q36DTI Arachis hypogaea HOM05D000005 ORTHO05D004370 2.6e-58 229.2 237 57.8
THA.LOC104823632 Tarenaya hassleriana HOM05D003797 ORTHO05D004370 2.6e-58 229.2 241 54.8
FAN07G0297 Fragaria x ananassa HOM05D003797 ORTHO05D004370 3.3e-58 228.8 236 59.7
Nitab4.5_0002414g0010 Nicotiana tabacum HOM05D003797 ORTHO05D004370 3.3e-58 228.8 233 58.8
Thecc.02G308100 Theobroma cacao HOM05D003797 ORTHO05D004370 4.4e-58 228.4 236 58.5
Actinidia36612 Actinidia chinensis HOM05D003797 ORTHO05D004370 5.7e-58 228.0 222 60.8
FAN22G2109 Fragaria x ananassa HOM05D003797 ORTHO05D004370 5.7e-58 228.0 236 59.7
TPR.G19268 Trifolium pratense HOM05D003797 ORTHO05D004370 5.7e-58 228.0 235 57.9
QL03p037712 Quercus lobata HOM05D003797 ORTHO05D004370 9.7e-58 227.3 239 57.7
SGA_v2.0_scaffold23G10159 Striga asiatica HOM05D003797 ORTHO05D004370 9.7e-58 227.3 222 59.0
Cpa.g.sc2.168 Carica papaya HOM05D003797 ORTHO05D004370 1.3e-57 226.9 236 57.6
Ciclev10016475m.g Citrus clementina HOM05D003797 ORTHO05D004370 1.7e-57 226.5 236 57.2
Gorai.013G029700 Gossypium raimondii HOM05D003797 ORTHO05D004370 1.7e-57 226.5 236 57.6
Oeu006298.1 Olea europaea HOM05D003797 ORTHO05D004370 1.7e-57 226.5 238 56.3
Gohir.A13G027600 Gossypium hirsutum HOM05D003797 ORTHO05D004370 2.2e-57 226.1 236 57.2
Sabra10G0076600 Salix brachista HOM05D003797 ORTHO05D004370 2.2e-57 226.1 236 58.5
Glyma.05G240600 Glycine max HOM05D003797 ORTHO05D004370 2.8e-57 225.7 237 56.5
Prupe.1G335200 Prunus persica HOM05D003797 ORTHO05D004370 2.8e-57 225.7 236 56.8
Cfa015046 Carpinus fangiana HOM05D003797 ORTHO05D004370 3.7e-57 225.3 236 57.6
FAN17G2298 Fragaria x ananassa HOM05D003797 ORTHO05D004370 3.7e-57 225.3 236 58.9
Aqoxy3G04068 Aquilegia oxysepala HOM05D003797 ORTHO05D004370 4.8e-57 224.9 230 57.8
Gohir.D13G026400 Gossypium hirsutum HOM05D003797 ORTHO05D004370 4.8e-57 224.9 236 57.2
Aa31LG2G8120 Aethionema arabicum HOM05D003797 ORTHO05D004370 6.3e-57 224.6 238 55.9
Glyma.08G047500 Glycine max HOM05D003797 ORTHO05D004370 6.3e-57 224.6 235 57.0
Sopen04g003210 Solanum pennellii HOM05D003797 ORTHO05D004370 6.3e-57 224.6 233 57.1
Dinv26370 Davidia involucrata HOM05D003797 ORTHO05D004370 8.3e-57 224.2 222 60.4
AL5G10900 Arabidopsis lyrata HOM05D003797 ORTHO05D004370 1.1e-56 223.8 241 54.8
VMungo0251G2898 Vigna mungo HOM05D003797 ORTHO05D004370 1.1e-56 223.8 237 56.5
Lalb_Chr05g0222091 Lupinus albus HOM05D003797 ORTHO05D004370 1.4e-56 223.4 237 57.4
Sp2g13230 Schrenkiella parvula HOM05D003797 ORTHO05D004370 1.4e-56 223.4 241 54.8
PGSC0003DMG400029467 Solanum tuberosum HOM05D003797 ORTHO05D004370 1.4e-56 223.4 233 56.7
TAR629G0971 Trochodendron aralioides HOM05D003797 ORTHO05D004370 1.4e-56 223.4 222 58.6
CARHR144350 Cardamine hirsuta HOM05D003797 ORTHO05D004370 1.8e-56 223.0 240 54.6
HanXRQChr16g0527241 Helianthus annuus HOM05D003797 ORTHO05D004370 1.8e-56 223.0 238 55.9
Atru.chr11.843 Acer truncatum HOM05D003797 ORTHO05D004370 2.4e-56 222.6 243 56.8
Atru.chr11.849 Acer truncatum HOM05D003797 ORTHO05D004370 2.4e-56 222.6 243 56.8
AT2G01770 Arabidopsis thaliana HOM05D003797 ORTHO05D004370 2.4e-56 222.6 241 54.4
FAN12G0353 Fragaria x ananassa HOM05D003797 ORTHO05D004370 2.4e-56 222.6 250 56.4
Duzib248G0263 Durio zibethinus HOM05D003797 ORTHO05D004370 3.1e-56 222.2 236 56.4
CSS0047498 Camellia sinensis var. sinensis HOM05D003797 ORTHO05D004370 4.1e-56 221.9 228 57.9
AUR62012750 Chenopodium quinoa HOM05D003797 ORTHO05D004370 4.1e-56 221.9 234 56.8
AUR62021908 Chenopodium quinoa HOM05D003797 ORTHO05D004370 4.1e-56 221.9 234 56.8
Ca_17254_v3 Cicer arietinum L. HOM05D003797 ORTHO05D004370 4.1e-56 221.9 235 57.4
Cc11_g06660 Coffea canephora HOM05D003797 ORTHO05D004370 5.3e-56 221.5 232 56.5
Eucgr.B02690 Eucalyptus grandis HOM05D003797 ORTHO05D004370 5.3e-56 221.5 237 56.1
MD16G1016600 Malus domestica HOM05D003797 ORTHO05D004370 5.3e-56 221.5 236 56.8
Solyc04g008060.3 Solanum lycopersicum HOM05D003797 ORTHO05D004370 7.0e-56 221.1 233 56.7
DCAR_023568 Daucus carota HOM05D003797 ORTHO05D004370 9.1e-56 220.7 222 59.5
Migut.E00497 Erythranthe guttata HOM05D003797 ORTHO05D004370 9.1e-56 220.7 222 59.0
HanXRQChr17g0565981 Helianthus annuus HOM05D003797 ORTHO05D004370 9.1e-56 220.7 222 58.6
MD13G1018700 Malus domestica HOM05D003797 ORTHO05D004370 1.2e-55 220.3 236 56.8
Carub.0005s0073 Capsella rubella HOM05D003797 ORTHO05D004370 2.0e-55 219.5 241 53.9
Dinv06119 Davidia involucrata HOM05D003797 ORTHO05D004370 2.0e-55 219.5 240 56.7
ECA234G4680 Erigeron canadensis HOM05D003797 ORTHO05D004370 2.0e-55 219.5 222 58.1
Psat7g007520 Pisum sativum HOM05D003797 ORTHO05D004370 2.0e-55 219.5 234 56.0
Sed0007838 Sechium edule HOM05D003797 ORTHO05D004370 2.0e-55 219.5 222 58.6
Ah.14g087870 Amaranthus hybridus HOM05D003797 ORTHO05D004370 2.7e-55 219.2 236 56.4
CAN.G74.19 Capsicum annuum HOM05D003797 ORTHO05D004370 2.7e-55 219.2 232 56.0
FvH4_4g33340 Fragaria vesca HOM05D003797 ORTHO05D004370 2.7e-55 219.2 236 57.2
MBI19_g09381_MAGBIO Magnolia biondii HOM05D003797 ORTHO05D004370 2.7e-55 219.2 222 56.8
MSTRG.2118 Avicennia marina HOM05D003797 ORTHO05D004370 4.5e-55 218.4 222 58.1
Medtr8g105810 Medicago truncatula HOM05D003797 ORTHO05D004370 4.5e-55 218.4 235 56.6
Nn3g18415 Nelumbo nucifera HOM05D003797 ORTHO05D004370 7.7e-55 217.6 222 58.1
Phvul.002G322900 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 7.7e-55 217.6 237 55.3
SalBow2G0350 Salvia bowleyana HOM05D003797 ORTHO05D004370 1.0e-54 217.2 222 57.2
Lsat_1_v5_gn_4_23500 Lactuca sativa HOM05D003797 ORTHO05D004370 1.3e-54 216.9 222 58.6
PSO732G0427 Papaver somniferum HOM05D003797 ORTHO05D004370 1.3e-54 216.9 233 54.9
Ah.09g234580 Amaranthus hybridus HOM05D003797 ORTHO05D004370 1.7e-54 216.5 236 56.4
Hma1.2p1_0234F.1_g098420 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 1.7e-54 216.5 238 55.0
Os04g0463400 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 1.7e-54 216.5 222 54.5
Rhsim09G0088200 Rhododendron simsii HOM05D003797 ORTHO05D004370 1.7e-54 216.5 222 58.1
Dinv00922 Davidia involucrata HOM05D003797 ORTHO05D004370 2.2e-54 216.1 231 57.1
LjContig00081g0026703 Lotus japonicus HOM05D003797 ORTHO05D004370 2.9e-54 215.7 234 56.4
CsaV3_5G027940 Cucumis sativus L. HOM05D003797 ORTHO05D004370 3.8e-54 215.3 222 57.2
Dinv03968 Davidia involucrata HOM05D003797 ORTHO05D004370 3.8e-54 215.3 234 56.4
Duzib268G1244 Durio zibethinus HOM05D003797 ORTHO05D004370 3.8e-54 215.3 236 55.9
Os09g0396900 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 5.0e-54 214.9 237 54.4
PSO675G2134 Papaver somniferum HOM05D003797 ORTHO05D004370 5.0e-54 214.9 233 54.9
BraA06t27283Z Brassica rapa HOM05D003797 ORTHO05D004370 1.1e-53 213.8 239 51.9
Lj3A863T39 Lonicera japonica HOM05D003797 ORTHO05D004370 3.2e-53 212.2 240 54.6
unitig_22.g5605 Utricularia gibba HOM05D003797 ORTHO05D004370 2.1e-52 209.5 235 53.2
unitig_8.g4013 Utricularia gibba HOM05D003797 ORTHO05D004370 2.7e-52 209.1 236 53.8
FAN17G0483 Fragaria x ananassa HOM05D003797 ORTHO05D004370 6.1e-52 208.0 237 52.3
GSVIVG01011628001 Vitis vinifera HOM05D003797 ORTHO05D004370 8.0e-52 207.6 244 52.9
Prupe.1G335300 Prunus persica HOM05D003797 ORTHO05D004370 1.0e-51 207.2 237 52.3
Zm00001eb312010 Zea mays HOM05D003797 ORTHO05D004370 1.8e-51 206.5 237 51.9
FAN22G0305 Fragaria x ananassa HOM05D003797 ORTHO05D004370 2.3e-51 206.1 237 51.9
PGR142G2609 Punica granatum HOM05D003797 ORTHO05D004370 2.3e-51 206.1 237 52.7
FAN12G2011 Fragaria x ananassa HOM05D003797 ORTHO05D004370 3.0e-51 205.7 237 51.9
RcHm_v2.0_Chr4g0442571 Rosa chinensis HOM05D003797 ORTHO05D004370 3.0e-51 205.7 237 51.9
CANSAT78G1947 Cannabis sativa HOM05D003797 ORTHO05D004370 5.2e-51 204.9 237 52.3
MD16G1016500 Malus domestica HOM05D003797 ORTHO05D004370 5.2e-51 204.9 237 51.9
Nn3g18417 Nelumbo nucifera HOM05D003797 ORTHO05D004370 5.2e-51 204.9 221 54.3
SEGI_33821 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 8.8e-51 204.1 222 55.0
FAN07G2428 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.2e-50 203.8 237 51.9
BcaC06g31278 Brassica carinata HOM05D003797 ORTHO05D004370 2.6e-50 202.6 266 47.4
CiPaw.06G054800 Carya illinoinensis HOM05D003797 ORTHO05D004370 2.6e-50 202.6 222 54.1
Nn3g18418 Nelumbo nucifera HOM05D003797 ORTHO05D004370 2.6e-50 202.6 238 51.3
PSO732G0533 Papaver somniferum HOM05D003797 ORTHO05D004370 2.6e-50 202.6 222 53.6
PSO675G5697 Papaver somniferum HOM05D003797 ORTHO05D004370 4.4e-50 201.8 222 53.2
Eucgr.G02084 Eucalyptus grandis HOM05D003797 ORTHO05D004370 5.7e-50 201.4 234 52.6
Sed0023787 Sechium edule HOM05D003797 ORTHO05D004370 9.8e-50 200.7 238 52.1
QL03p037918 Quercus lobata HOM05D003797 ORTHO05D004370 1.7e-49 199.9 238 51.7
RcHm_v2.0_Chr4g0442581 Rosa chinensis HOM05D003797 ORTHO05D004370 1.7e-49 199.9 237 51.1
unitig_27.g25168 Utricularia gibba HOM05D003797 ORTHO05D004370 1.7e-49 199.9 238 51.3
SHI04334 Sapria himalayana HOM05D003797 ORTHO05D004370 8.3e-49 197.6 232 52.6
CDE05G1216 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 1.1e-48 197.2 222 52.7
Atru.chr11.837 Acer truncatum HOM05D003797 ORTHO05D004370 1.4e-48 196.8 241 51.5
ATR0118G024 Amborella trichopoda HOM05D003797 ORTHO05D004370 1.4e-48 196.8 222 52.7
CsaV3_5G027930 Cucumis sativus L. HOM05D003797 ORTHO05D004370 1.4e-48 196.8 237 51.1
AagrBONN_evm.TU.Sc2ySwM_228.2367 Anthoceros agrestis HOM05D003797 ORTHO05D004370 1.8e-48 196.4 221 53.8
GSVIVG01011629001 Vitis vinifera HOM05D003797 ORTHO05D004370 1.8e-48 196.4 194 57.7
MELO3C005260.2 Cucumis melo HOM05D003797 ORTHO05D004370 2.4e-48 196.1 237 51.5
Eucgr.B02691 Eucalyptus grandis HOM05D003797 ORTHO05D004370 9.1e-48 194.1 241 50.6
EL10Ac8g20121 Beta vulgaris HOM05D003797 ORTHO05D004370 2.0e-47 193.0 243 51.9
Mapoly0116s0023 Marchantia polymorpha HOM05D003797 ORTHO05D004370 4.5e-47 191.8 224 51.8
Potri.010G104100 Populus trichocarpa HOM05D003797 ORTHO05D004370 7.7e-47 191.0 237 50.2
PSO384G3089 Papaver somniferum HOM05D003797 ORTHO05D004370 1.3e-46 190.3 223 49.8
Pp3c2_34540 Physcomitrium patens HOM05D003797 ORTHO05D004370 3.8e-46 188.7 229 49.3
ClCG01G006640 Citrullus lanatus HOM05D003797 ORTHO05D004370 6.6e-46 188.0 222 53.6
Ciclev10017583m.g Citrus clementina HOM05D003797 ORTHO05D004370 8.6e-46 187.6 222 50.5
Manes.17G085600 Manihot esculenta HOM05D003797 ORTHO05D004370 8.6e-46 187.6 236 48.7
Peaxi162Scf00337g00715 Petunia axillaris HOM05D003797 ORTHO05D004370 1.1e-45 187.2 164 64.0
HanXRQChr12g0383081 Helianthus annuus HOM05D003797 ORTHO05D004370 5.5e-45 184.9 166 63.3
HPP92_023443 Vanilla planifolia HOM05D003797 ORTHO05D004370 9.5e-45 184.1 219 49.3
Duzib251G0065 Durio zibethinus HOM05D003797 ORTHO05D004370 4.0e-43 178.7 246 45.5
Thecc.02G307900 Theobroma cacao HOM05D003797 ORTHO05D004370 6.8e-43 177.9 249 45.4
MELO3C005259.2 Cucumis melo HOM05D003797 ORTHO05D004370 1.5e-42 176.8 164 61.6
Phvul.002G322800 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 2.0e-42 176.4 237 50.2
Atru.chr11.846 Acer truncatum HOM05D003797 ORTHO05D004370 4.4e-42 175.3 237 50.2
COL.COLO4_27614 Corchorus olitorius HOM05D003797 ORTHO05D004370 5.7e-42 174.9 233 46.4
HanXRQChr09g0251961 Helianthus annuus HOM05D003797 ORTHO05D004370 7.5e-42 174.5 161 62.7
A06p44090 Brassica napus HOM05D003797 ORTHO05D004370 2.8e-41 172.6 168 56.0
Zm00001eb424350 Zea mays HOM05D003797 ORTHO05D004370 2.8e-41 172.6 164 57.3
Haze_10851 Corylus avellana HOM05D003797 ORTHO05D004370 4.9e-41 171.8 134 70.9
HPP92_023452 Vanilla planifolia HOM05D003797 ORTHO05D004370 6.3e-41 171.4 190 52.1
Haze_10850 Corylus avellana HOM05D003797 ORTHO05D004370 1.1e-40 170.6 181 54.7
SMO169G0175 Selaginella moellendorffii HOM05D003797 ORTHO05D004370 1.1e-40 170.6 221 46.6
CDE05G1112 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 4.1e-40 168.7 168 56.0
Hma1.2p1_1538F.1_g289560 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 5.0e-38 161.8 224 44.6
PSO339G4314 Papaver somniferum HOM05D003797 ORTHO05D004370 1.1e-37 160.6 168 53.0
BcaB05g24664 Brassica carinata HOM05D003797 ORTHO05D004370 7.3e-37 157.9 211 46.0
Eucgr.L02831 Eucalyptus grandis HOM05D003797 ORTHO05D004370 3.6e-36 155.6 132 63.6
Hma1.2p1_0940F.1_g239510 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 1.3e-30 137.1 134 55.2
VMungo0251G0608 Vigna mungo HOM05D003797 ORTHO05D004370 1.3e-25 120.6 142 52.1
Hund23441 Selenicereus undatus HOM05D003797 ORTHO05D004370 3.2e-24 115.9 145 49.0
Phvul.002G323700 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 1.6e-23 113.6 141 48.9
Zm00001eb099160 Zea mays HOM05D003797 ORTHO05D004370 1.3e-22 110.5 100 61.0
SEGI_29045 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 1.7e-22 110.2 108 56.5
VMungo0251G2644 Vigna mungo HOM05D003797 ORTHO05D004370 3.3e-21 105.9 99 62.6
unitig_52.g17091 Utricularia gibba HOM05D003797 ORTHO05D004370 2.8e-12 76.3 116 44.0
Nn4g24451 Nelumbo nucifera HOM05D003797 ORTHO05D004370 2.6e-10 69.7 59 61.0
Thecc.06G045600 Theobroma cacao HOM05D003797 ORTHO05D004370 1.2e-07 60.8 51 54.9
Zm00001eb099150 Zea mays HOM05D003797 ORTHO05D004370 1.7e-06 57.0 63 58.7
CSS0024034 Camellia sinensis var. sinensis HOM05D003797 ORTHO05D004370 3.9e-06 55.8 91 42.9
unitig_29.g31879 Utricularia gibba HOM05D003797 ORTHO05D004370 3.9e-06 55.8 42 69.0
Oeu043982.1 Olea europaea HOM05D003797 ORTHO05D004370 6.6e-06 55.1 48 64.6


User provided reference genes

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