Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 1.7e-58 229.2 118 100.0
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 5.6e-38 161.0 94 88.3
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 1.9e-30 136.0 94 74.5
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 4.4e-27 124.8 90 73.3
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 2.9e-18 95.5 119 48.7
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 1.9e-17 92.8 94 52.1
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.9e-17 92.8 94 54.3
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 1.9e-17 92.8 94 53.2
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.1e-17 90.9 93 53.8
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.2e-16 90.1 94 53.2
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.2e-16 90.1 94 53.2
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.2e-16 90.1 94 53.2
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.2e-16 90.1 94 53.2
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.2e-16 90.1 94 53.2
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.2e-16 90.1 94 53.2
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 2.7e-16 89.0 94 53.2
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.7e-16 89.0 94 53.2
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.5e-16 88.6 94 52.1
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 6.0e-16 87.8 86 57.0
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.0e-15 87.0 94 46.8
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.0e-15 87.0 94 52.1
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 1.0e-15 87.0 100 49.0
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 1.3e-15 86.7 93 48.4
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 1.8e-15 86.3 84 53.6
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 1.8e-15 86.3 85 55.3
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 2.3e-15 85.9 96 46.9
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 3.0e-15 85.5 88 53.4
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 3.0e-15 85.5 92 46.7
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 3.0e-15 85.5 93 49.5
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 3.9e-15 85.1 84 54.8
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 5.1e-15 84.7 93 48.4
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 5.1e-15 84.7 94 47.9
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 6.7e-15 84.3 81 55.6
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 6.7e-15 84.3 93 49.5
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 6.7e-15 84.3 93 49.5
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 1.1e-14 83.6 87 54.0
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 1.1e-14 83.6 95 49.5
Eucgr.L03232 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.5e-14 83.2 91 46.2
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 1.5e-14 83.2 93 47.3
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 1.5e-14 83.2 92 50.0
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 2.5e-14 82.4 92 48.9
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 2.5e-14 82.4 92 48.9
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 3.3e-14 82.0 88 52.3
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 3.3e-14 82.0 96 43.8
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 3.3e-14 82.0 84 53.6
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 4.3e-14 81.6 94 52.1
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 5.6e-14 81.3 88 51.1
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 5.6e-14 81.3 95 51.6
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 7.4e-14 80.9 84 50.0
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 9.6e-14 80.5 88 48.9
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 1.3e-13 80.1 94 47.9
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 1.3e-13 80.1 92 48.9
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 1.3e-13 80.1 85 51.8
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.6e-13 79.7 94 51.1
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 2.1e-13 79.3 94 51.1
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 2.8e-13 79.0 85 50.6
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 4.8e-13 78.2 90 48.9
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 4.8e-13 78.2 94 44.7
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 6.2e-13 77.8 84 51.2
BraA02t05327Z Brassica rapa HOM05D005439 ORTHO05D006793 8.1e-13 77.4 86 48.8
BcaB08g36849 Brassica carinata HOM05D005439 ORTHO05D006793 1.1e-12 77.0 86 50.0
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 1.1e-12 77.0 106 43.4
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 1.1e-12 77.0 89 48.3
A02p03560 Brassica napus HOM05D005439 ORTHO05D006793 1.4e-12 76.6 86 48.8
C02p08370 Brassica napus HOM05D005439 ORTHO05D006793 1.4e-12 76.6 86 47.7
BolC2t06755H Brassica oleracea HOM05D005439 ORTHO05D006793 1.4e-12 76.6 86 47.7
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.4e-12 76.6 94 48.9
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 1.4e-12 76.6 86 47.7
BcaC03g18493 Brassica carinata HOM05D005439 ORTHO05D006793 1.8e-12 76.3 83 49.4
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 1.8e-12 76.3 89 47.2
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 1.8e-12 76.3 92 45.7
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 1.8e-12 76.3 90 50.0
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 2.4e-12 75.9 94 44.7
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 2.4e-12 75.9 94 43.6
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 6.9e-12 74.3 95 45.3
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 6.9e-12 74.3 95 45.3
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 1.2e-11 73.6 124 37.1
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 1.2e-11 73.6 86 44.2
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.5e-11 73.2 88 50.0
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 3.4e-11 72.0 93 44.1
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 3.4e-11 72.0 86 46.5
Sp6g27700 Schrenkiella parvula HOM05D005439 ORTHO05D006793 3.4e-11 72.0 86 46.5
C09p60700 Brassica napus HOM05D005439 ORTHO05D006793 4.5e-11 71.6 86 45.3
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 4.5e-11 71.6 100 44.0
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 5.8e-11 71.2 96 41.7
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 5.8e-11 71.2 110 40.0
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.6e-11 70.9 74 52.7
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 7.6e-11 70.9 98 39.8
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 9.9e-11 70.5 83 47.0
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 1.3e-10 70.1 84 50.0
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 1.3e-10 70.1 84 45.2
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 2.2e-10 69.3 90 44.4
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 3.8e-10 68.6 100 41.0
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 1.1e-09 67.0 84 46.4
Carub.0003s1515 Capsella rubella HOM05D005439 ORTHO05D006793 1.4e-09 66.6 82 47.6
AT3G15420 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 1.9e-09 66.2 82 48.8
TPR.G39010 Trifolium pratense HOM05D005439 ORTHO05D006793 1.9e-09 66.2 70 48.6
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 2.4e-09 65.9 92 42.4
AL3G27970 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 3.2e-09 65.5 82 47.6
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 3.2e-09 65.5 101 42.6
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 3.2e-09 65.5 92 39.1
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 4.2e-09 65.1 85 44.7
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 4.2e-09 65.1 101 41.6
Thhalv10021755m.g Eutrema salsugineum HOM05D005439 ORTHO05D006793 1.6e-08 63.2 82 43.9
unitig_32.g11156 Utricularia gibba HOM05D005439 ORTHO05D006793 1.6e-08 63.2 89 40.4
Aa31LG8G2660 Aethionema arabicum HOM05D005439 ORTHO05D006793 2.1e-08 62.8 86 44.2
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 2.1e-08 62.8 86 44.2
Zm00001eb403870 Zea mays HOM05D005439 ORTHO05D006793 4.6e-08 61.6 98 42.9
Zm00001eb001470 Zea mays HOM05D005439 ORTHO05D006793 6.0e-08 61.2 94 40.4
AL2G40660 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 1.0e-07 60.5 96 44.8
MD11G1243100 Malus domestica HOM05D005439 ORTHO05D006793 1.0e-07 60.5 95 38.9
QL08p019954 Quercus lobata HOM05D005439 ORTHO05D006793 1.3e-07 60.1 75 45.3
BolC9t58901H Brassica oleracea HOM05D005439 ORTHO05D006793 3.0e-07 58.9 77 42.9
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 3.0e-07 58.9 94 38.3
BcaC04g18875 Brassica carinata HOM05D005439 ORTHO05D006793 3.9e-07 58.5 77 42.9
Mapoly0076s0011 Marchantia polymorpha HOM05D005439 ORTHO05D006793 8.7e-07 57.4 85 43.5
Potri.001G402700 Populus trichocarpa HOM05D005439 ORTHO05D006793 8.7e-07 57.4 48 56.2
AT1G80745 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 1.1e-06 57.0 82 40.2
HPP92_001754 Vanilla planifolia HOM05D005439 ORTHO05D006793 1.1e-06 57.0 82 39.0
SalBow7G3564 Salvia bowleyana HOM05D005439 ORTHO05D006793 1.5e-06 56.6 92 38.0
CDE08G1297 Ceratophyllum demersum HOM05D005439 ORTHO05D006793 1.9e-06 56.2 72 43.1
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 5.6e-06 54.7 47 55.3


User provided reference genes

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