Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010427 Sechium edule HOM05D007681 ORTHO05D009734 9.2e-81 303.5 156 100.0
CsaV3_5G014700 Cucumis sativus L. HOM05D007681 ORTHO05D009734 5.5e-49 198.0 167 66.5
ClCG07G005970 Citrullus lanatus HOM05D007681 ORTHO05D009734 2.4e-44 182.6 167 63.5
CiPaw.06G048600 Carya illinoinensis HOM05D007681 ORTHO05D009734 1.3e-37 160.2 163 53.4
Cfa014982 Carpinus fangiana HOM05D007681 ORTHO05D009734 4.8e-37 158.3 167 50.9
Prupe.1G330200 Prunus persica HOM05D007681 ORTHO05D009734 4.5e-35 151.8 180 49.4
CANSAT01G2988 Cannabis sativa HOM05D007681 ORTHO05D009734 1.4e-33 146.7 140 57.1
MD13G1021700 Malus domestica HOM05D007681 ORTHO05D009734 7.2e-33 144.4 179 49.7
MELO3C026423.2 Cucumis melo HOM05D007681 ORTHO05D009734 1.2e-32 143.7 129 63.6
FvH4_4g34062 Fragaria vesca HOM05D007681 ORTHO05D009734 1.1e-28 130.6 178 46.6
Gohir.1Z015700 Gossypium hirsutum HOM05D007681 ORTHO05D009734 4.1e-28 128.6 111 56.8
Gohir.A01G150154 Gossypium hirsutum HOM05D007681 ORTHO05D009734 4.1e-28 128.6 111 56.8
RcHm_v2.0_Chr4g0443571 Rosa chinensis HOM05D007681 ORTHO05D009734 4.1e-28 128.6 182 46.7
Gorai.002G176600 Gossypium raimondii HOM05D007681 ORTHO05D009734 5.3e-28 128.3 111 55.9
FAN17G1502 Fragaria x ananassa HOM05D007681 ORTHO05D009734 1.5e-27 126.7 179 45.3
Gohir.D01G143200 Gossypium hirsutum HOM05D007681 ORTHO05D009734 4.5e-27 125.2 111 55.0
Thecc.02G287600 Theobroma cacao HOM05D007681 ORTHO05D009734 4.5e-27 125.2 165 47.3
FAN22G1679 Fragaria x ananassa HOM05D007681 ORTHO05D009734 1.0e-26 124.0 182 45.6
Cpa.g.sc2.238 Carica papaya HOM05D007681 ORTHO05D009734 3.8e-26 122.1 166 42.8
Dinv28046 Davidia involucrata HOM05D007681 ORTHO05D009734 8.5e-26 120.9 164 44.5
Glyma.07G166400 Glycine max HOM05D007681 ORTHO05D009734 1.1e-25 120.6 160 44.4
Eucgr.B02939 Eucalyptus grandis HOM05D007681 ORTHO05D009734 1.9e-25 119.8 152 46.1
Oeu063591.1 Olea europaea HOM05D007681 ORTHO05D009734 1.9e-25 119.8 160 43.8
Actinidia36647 Actinidia chinensis HOM05D007681 ORTHO05D009734 2.5e-25 119.4 153 43.8
Migut.L00587 Erythranthe guttata HOM05D007681 ORTHO05D009734 5.5e-25 118.2 131 48.9
Manes.15G131200 Manihot esculenta HOM05D007681 ORTHO05D009734 9.4e-25 117.5 163 41.7
BcaC03g17055 Brassica carinata HOM05D007681 ORTHO05D009734 1.2e-24 117.1 156 44.9
BolC2t11054H Brassica oleracea HOM05D007681 ORTHO05D009734 1.2e-24 117.1 156 44.2
Psat6g044480 Pisum sativum HOM05D007681 ORTHO05D009734 1.2e-24 117.1 142 46.5
C02p49750 Brassica napus HOM05D007681 ORTHO05D009734 1.6e-24 116.7 156 44.9
PGR102G0336 Punica granatum HOM05D007681 ORTHO05D009734 1.6e-24 116.7 172 41.9
Lsat_1_v5_gn_8_44280 Lactuca sativa HOM05D007681 ORTHO05D009734 3.6e-24 115.5 158 41.8
Hma1.2p1_0330F.1_g127440 Hydrangea macrophylla HOM05D007681 ORTHO05D009734 4.7e-24 115.2 165 45.5
Sp2g13030 Schrenkiella parvula HOM05D007681 ORTHO05D009734 7.9e-24 114.4 161 44.7
Ciclev10016943m.g Citrus clementina HOM05D007681 ORTHO05D009734 1.4e-23 113.6 161 42.9
BcaB07g30389 Brassica carinata HOM05D007681 ORTHO05D009734 1.8e-23 113.2 156 44.9
CARHR144140 Cardamine hirsuta HOM05D007681 ORTHO05D009734 1.8e-23 113.2 158 44.9
TPR.G36897 Trifolium pratense HOM05D007681 ORTHO05D009734 1.8e-23 113.2 142 46.5
Thhalv10005039m.g Eutrema salsugineum HOM05D007681 ORTHO05D009734 3.9e-23 112.1 161 42.9
Lj2g0022739 Lotus japonicus HOM05D007681 ORTHO05D009734 5.1e-23 111.7 130 46.9
Lj5g0022624 Lotus japonicus HOM05D007681 ORTHO05D009734 5.1e-23 111.7 130 46.9
Medtr1g031740 Medicago truncatula HOM05D007681 ORTHO05D009734 5.1e-23 111.7 133 47.4
MSTRG.7616 Avicennia marina HOM05D007681 ORTHO05D009734 6.7e-23 111.3 155 43.9
BraA02t08231Z Brassica rapa HOM05D007681 ORTHO05D009734 6.7e-23 111.3 119 47.9
Lalb_Chr10g0095991 Lupinus albus HOM05D007681 ORTHO05D009734 8.8e-23 110.9 176 43.2
A02p32170 Brassica napus HOM05D007681 ORTHO05D009734 1.1e-22 110.5 156 44.2
ECA233G2077 Erigeron canadensis HOM05D007681 ORTHO05D009734 1.5e-22 110.2 141 44.7
TWI77G0184 Tripterygium wilfordii HOM05D007681 ORTHO05D009734 3.3e-22 109.0 117 53.0
AT2G01590 Arabidopsis thaliana HOM05D007681 ORTHO05D009734 4.4e-22 108.6 120 47.5
AUR62013520 Chenopodium quinoa HOM05D007681 ORTHO05D009734 4.4e-22 108.6 155 41.3
TAR629G0584 Trochodendron aralioides HOM05D007681 ORTHO05D009734 7.4e-22 107.8 166 41.0
AL5G10680 Arabidopsis lyrata HOM05D007681 ORTHO05D009734 9.7e-22 107.5 118 47.5
Atru.chr11.647 Acer truncatum HOM05D007681 ORTHO05D009734 1.7e-21 106.7 109 49.5
Ca_12590_v3 Cicer arietinum L. HOM05D007681 ORTHO05D009734 2.2e-21 106.3 171 42.1
Nn3g18293 Nelumbo nucifera HOM05D007681 ORTHO05D009734 2.8e-21 105.9 110 52.7
AUR62026755 Chenopodium quinoa HOM05D007681 ORTHO05D009734 3.7e-21 105.5 167 38.9
Carub.0005s0053 Capsella rubella HOM05D007681 ORTHO05D009734 8.2e-21 104.4 172 40.1
EL10Ac1g01492 Beta vulgaris HOM05D007681 ORTHO05D009734 1.1e-20 104.0 139 41.0
Nitab4.5_0001343g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 1.1e-20 104.0 181 37.0
Sabra10G0080500 Salix brachista HOM05D007681 ORTHO05D009734 1.4e-20 103.6 179 37.4
Aa31LG2G8310 Aethionema arabicum HOM05D007681 ORTHO05D009734 7.0e-20 101.3 117 44.4
GSVIVG01011705001 Vitis vinifera HOM05D007681 ORTHO05D009734 7.0e-20 101.3 139 44.6
Potri.010G110100 Populus trichocarpa HOM05D007681 ORTHO05D009734 1.5e-19 100.1 115 45.2
Solyc05g026570.3 Solanum lycopersicum HOM05D007681 ORTHO05D009734 1.5e-19 100.1 149 40.3
Sopen05g023100 Solanum pennellii HOM05D007681 ORTHO05D009734 2.6e-19 99.4 142 41.5
PGSC0003DMG400015899 Solanum tuberosum HOM05D007681 ORTHO05D009734 2.6e-19 99.4 149 40.9
Nitab4.5_0012949g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 3.5e-19 99.0 187 36.4
HanXRQChr12g0363581 Helianthus annuus HOM05D007681 ORTHO05D009734 4.5e-19 98.6 163 38.7
Phvul.003G022100 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 4.5e-19 98.6 155 39.4
unitig_26.g8951 Utricularia gibba HOM05D007681 ORTHO05D009734 5.9e-19 98.2 156 38.5
PSO478G3571 Papaver somniferum HOM05D007681 ORTHO05D009734 2.2e-18 96.3 165 39.4
PSO017G3157 Papaver somniferum HOM05D007681 ORTHO05D009734 2.9e-18 95.9 163 39.9
Aqoxy3G00048 Aquilegia oxysepala HOM05D007681 ORTHO05D009734 8.5e-18 94.4 169 40.2
Nitab4.5_0000018g0170 Nicotiana tabacum HOM05D007681 ORTHO05D009734 3.2e-17 92.4 181 35.4
Peaxi162Scf00376g00013 Petunia axillaris HOM05D007681 ORTHO05D009734 4.2e-17 92.0 68 60.3
Rhsim09G0093700 Rhododendron simsii HOM05D007681 ORTHO05D009734 7.2e-17 91.3 104 46.2
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 1.6e-16 90.1 91 51.6
arahy.Tifrunner.gnm1.ann1.W0FD01 Arachis hypogaea HOM05D007681 ORTHO05D009734 3.6e-16 89.0 144 39.6
arahy.Tifrunner.gnm1.ann1.2VU2GF Arachis hypogaea HOM05D007681 ORTHO05D009734 1.8e-15 86.7 95 51.6
Lj6A742G71 Lonicera japonica HOM05D007681 ORTHO05D009734 2.3e-15 86.3 86 48.8
QL03p033908 Quercus lobata HOM05D007681 ORTHO05D009734 5.7e-14 81.6 81 48.1
Phvul.005G062000 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 3.1e-12 75.9 78 48.7
Ah.01g006360 Amaranthus hybridus HOM05D007681 ORTHO05D009734 5.3e-12 75.1 139 38.8
THA.LOC104805073 Tarenaya hassleriana HOM05D007681 ORTHO05D009734 4.5e-11 72.0 157 35.0
MBI16_g06252_MAGBIO Magnolia biondii HOM05D007681 ORTHO05D009734 1.3e-10 70.5 66 53.0
Os09g0306650 Oryza sativa ssp. japonica HOM05D007681 ORTHO05D009734 6.1e-08 61.6 126 34.9
Zm00001eb309450 Zea mays HOM05D007681 ORTHO05D009734 4.4e-06 55.5 116 31.9


User provided reference genes

Program Settings