Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010413 Sechium edule HOM05D003369 ORTHO05D004089 4.8e-54 214.2 101 100.0
MELO3C022652.2 Cucumis melo HOM05D003369 ORTHO05D004089 3.2e-18 95.1 75 68.0
CsaV3_3G030590 Cucumis sativus L. HOM05D003369 ORTHO05D004089 4.2e-18 94.7 75 66.7
Manes.10G002000 Manihot esculenta HOM05D003369 ORTHO05D004089 2.1e-17 92.4 75 65.3
Manes.07G142600 Manihot esculenta HOM05D003369 ORTHO05D004089 2.7e-17 92.0 75 65.3
Sed0008109 Sechium edule HOM05D003369 ORTHO05D004089 3.6e-17 91.7 75 65.3
CiPaw.10G110000 Carya illinoinensis HOM05D003369 ORTHO05D004089 4.7e-17 91.3 75 64.0
CANSAT54G1399 Cannabis sativa HOM05D003369 ORTHO05D004089 6.1e-17 90.9 75 64.0
CiPaw.09G143000 Carya illinoinensis HOM05D003369 ORTHO05D004089 6.1e-17 90.9 75 64.0
ClCG11G010900 Citrullus lanatus HOM05D003369 ORTHO05D004089 6.1e-17 90.9 75 65.3
QL05p063633 Quercus lobata HOM05D003369 ORTHO05D004089 6.1e-17 90.9 75 65.3
Aa31LG3G1410 Aethionema arabicum HOM05D003369 ORTHO05D004089 7.9e-17 90.5 75 62.7
PSO170G0385 Papaver somniferum HOM05D003369 ORTHO05D004089 7.9e-17 90.5 75 64.0
Duzib114G1008 Durio zibethinus HOM05D003369 ORTHO05D004089 1.0e-16 90.1 75 62.7
BcaC01g05384 Brassica carinata HOM05D003369 ORTHO05D004089 1.4e-16 89.7 75 62.7
A03p22890 Brassica napus HOM05D003369 ORTHO05D004089 1.4e-16 89.7 75 62.7
C03p27140 Brassica napus HOM05D003369 ORTHO05D004089 1.4e-16 89.7 75 62.7
BolC3t15095H Brassica oleracea HOM05D003369 ORTHO05D004089 1.4e-16 89.7 75 62.7
BraA03t11513Z Brassica rapa HOM05D003369 ORTHO05D004089 1.4e-16 89.7 75 62.7
Prupe.1G349800 Prunus persica HOM05D003369 ORTHO05D004089 1.4e-16 89.7 75 64.0
MD00G1126900 Malus domestica HOM05D003369 ORTHO05D004089 1.8e-16 89.4 75 62.7
Sp4g23040 Schrenkiella parvula HOM05D003369 ORTHO05D004089 1.8e-16 89.4 75 62.7
THA.LOC104814068 Tarenaya hassleriana HOM05D003369 ORTHO05D004089 1.8e-16 89.4 75 61.3
AL4G38590 Arabidopsis lyrata HOM05D003369 ORTHO05D004089 3.0e-16 88.6 75 61.3
AT2G40730 Arabidopsis thaliana HOM05D003369 ORTHO05D004089 3.0e-16 88.6 75 61.3
Carub.0004s2301 Capsella rubella HOM05D003369 ORTHO05D004089 3.0e-16 88.6 75 61.3
Nitab4.5_0003473g0020 Nicotiana tabacum HOM05D003369 ORTHO05D004089 3.0e-16 88.6 75 61.3
Sopen06g015200 Solanum pennellii HOM05D003369 ORTHO05D004089 3.0e-16 88.6 75 61.3
THA.LOC104824367 Tarenaya hassleriana HOM05D003369 ORTHO05D004089 3.0e-16 88.6 75 61.3
TWI53G1724 Tripterygium wilfordii HOM05D003369 ORTHO05D004089 3.0e-16 88.6 75 62.7
Sc05g0004490 Simmondsia chinensis HOM05D003369 ORTHO05D004089 3.9e-16 88.2 75 62.7
PGSC0003DMG400008777 Solanum tuberosum HOM05D003369 ORTHO05D004089 3.9e-16 88.2 75 61.3
Actinidia13643 Actinidia chinensis HOM05D003369 ORTHO05D004089 5.1e-16 87.8 75 62.7
Gohir.A05G277600 Gossypium hirsutum HOM05D003369 ORTHO05D004089 5.1e-16 87.8 75 61.3
Gohir.D05G279200 Gossypium hirsutum HOM05D003369 ORTHO05D004089 5.1e-16 87.8 75 61.3
Gorai.009G292700 Gossypium raimondii HOM05D003369 ORTHO05D004089 5.1e-16 87.8 75 61.3
Duzib106G0164 Durio zibethinus HOM05D003369 ORTHO05D004089 6.7e-16 87.4 75 61.3
MD13G1002600 Malus domestica HOM05D003369 ORTHO05D004089 6.7e-16 87.4 75 61.3
BcaB01g03521 Brassica carinata HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 61.3
CARHR135820 Cardamine hirsuta HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 60.0
Cpa.g.sc19.46 Carica papaya HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 61.3
Ca_09969_v3 Cicer arietinum L. HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 62.7
Glyma.09G252000 Glycine max HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 64.0
Glyma.18G240600 Glycine max HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 64.0
Lj5g0006652 Lotus japonicus HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 62.7
Nn5g26838 Nelumbo nucifera HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 61.3
Nitab4.5_0000171g0170 Nicotiana tabacum HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 61.3
PSO017G0651 Papaver somniferum HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 62.7
Phvul.008G055600 Phaseolus vulgaris HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 64.0
Solyc06g048890.4 Solanum lycopersicum HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 60.0
TPR.G35277 Trifolium pratense HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 62.7
VMungo1383G1217 Vigna mungo HOM05D003369 ORTHO05D004089 1.1e-15 86.7 75 64.0
MSTRG.27258 Avicennia marina HOM05D003369 ORTHO05D004089 1.5e-15 86.3 75 60.0
Ciclev10030740m.g Citrus clementina HOM05D003369 ORTHO05D004089 1.5e-15 86.3 75 58.7
Thhalv10016269m.g Eutrema salsugineum HOM05D003369 ORTHO05D004089 1.5e-15 86.3 75 60.0
TWI09G0152 Tripterygium wilfordii HOM05D003369 ORTHO05D004089 1.5e-15 86.3 75 61.3
GSVIVG01032663001 Vitis vinifera HOM05D003369 ORTHO05D004089 1.5e-15 86.3 75 61.3
Glyma.20G219600 Glycine max HOM05D003369 ORTHO05D004089 2.0e-15 85.9 75 61.3
Nn2g10283 Nelumbo nucifera HOM05D003369 ORTHO05D004089 2.0e-15 85.9 75 60.0
Peaxi162Scf00739g00425 Petunia axillaris HOM05D003369 ORTHO05D004089 2.0e-15 85.9 75 60.0
Psat4g220880 Pisum sativum HOM05D003369 ORTHO05D004089 2.0e-15 85.9 75 61.3
vmacro06898 Vaccinium macrocarpon HOM05D003369 ORTHO05D004089 2.0e-15 85.9 75 61.3
Gohir.A06G179800 Gossypium hirsutum HOM05D003369 ORTHO05D004089 2.6e-15 85.5 75 60.0
Gohir.D06G186800 Gossypium hirsutum HOM05D003369 ORTHO05D004089 2.6e-15 85.5 75 60.0
Gorai.010G219100 Gossypium raimondii HOM05D003369 ORTHO05D004089 2.6e-15 85.5 75 60.0
Medtr6g086565 Medicago truncatula HOM05D003369 ORTHO05D004089 2.6e-15 85.5 75 61.3
Aqoxy3G00685 Aquilegia oxysepala HOM05D003369 ORTHO05D004089 3.3e-15 85.1 75 61.3
Thecc.10G184000 Theobroma cacao HOM05D003369 ORTHO05D004089 3.3e-15 85.1 75 61.3
Phvul.010G077634 Phaseolus vulgaris HOM05D003369 ORTHO05D004089 4.4e-15 84.7 75 61.3
CSS0036715 Camellia sinensis var. sinensis HOM05D003369 ORTHO05D004089 5.7e-15 84.3 75 60.0
CAN.G203.55 Capsicum annuum HOM05D003369 ORTHO05D004089 5.7e-15 84.3 75 60.0
Oeu018743.1 Olea europaea HOM05D003369 ORTHO05D004089 5.7e-15 84.3 75 60.0
Psat0s4462g0120 Pisum sativum HOM05D003369 ORTHO05D004089 5.7e-15 84.3 75 60.0
BcaC02g07330 Brassica carinata HOM05D003369 ORTHO05D004089 7.4e-15 84.0 75 58.7
A04p31100 Brassica napus HOM05D003369 ORTHO05D004089 7.4e-15 84.0 75 58.7
BraA04t18565Z Brassica rapa HOM05D003369 ORTHO05D004089 7.4e-15 84.0 75 58.7
ECA238G1180 Erigeron canadensis HOM05D003369 ORTHO05D004089 7.4e-15 84.0 75 60.0
Eucgr.J00108 Eucalyptus grandis HOM05D003369 ORTHO05D004089 7.4e-15 84.0 75 60.0
Lsat_1_v5_gn_2_126361 Lactuca sativa HOM05D003369 ORTHO05D004089 7.4e-15 84.0 75 60.0
Nitab4.5_0000375g0250 Nicotiana tabacum HOM05D003369 ORTHO05D004089 7.4e-15 84.0 75 58.7
Nitab4.5_0011372g0040 Nicotiana tabacum HOM05D003369 ORTHO05D004089 7.4e-15 84.0 75 58.7
RcHm_v2.0_Chr4g0447001 Rosa chinensis HOM05D003369 ORTHO05D004089 1.3e-14 83.2 75 58.7
TAR633G0919 Trochodendron aralioides HOM05D003369 ORTHO05D004089 1.3e-14 83.2 75 61.3
Atru.chr12.204 Acer truncatum HOM05D003369 ORTHO05D004089 1.7e-14 82.8 75 58.7
BcaB06g29170 Brassica carinata HOM05D003369 ORTHO05D004089 1.7e-14 82.8 75 58.7
Haze_05900 Corylus avellana HOM05D003369 ORTHO05D004089 1.7e-14 82.8 113 46.9
Glyma.10G170400 Glycine max HOM05D003369 ORTHO05D004089 1.7e-14 82.8 75 60.0
Os01g0819900 Oryza sativa ssp. japonica HOM05D003369 ORTHO05D004089 1.7e-14 82.8 75 58.7
PGR044G0140 Punica granatum HOM05D003369 ORTHO05D004089 1.7e-14 82.8 75 57.3
arahy.Tifrunner.gnm1.ann1.ABG2GV Arachis hypogaea HOM05D003369 ORTHO05D004089 2.2e-14 82.4 75 58.7
arahy.Tifrunner.gnm1.ann1.HI4H5F Arachis hypogaea HOM05D003369 ORTHO05D004089 2.2e-14 82.4 75 58.7
Migut.F00574 Erythranthe guttata HOM05D003369 ORTHO05D004089 2.2e-14 82.4 75 58.7
Dinv34494 Davidia involucrata HOM05D003369 ORTHO05D004089 4.8e-14 81.3 75 58.7
SGA_v2.0_scaffold327G48760 Striga asiatica HOM05D003369 ORTHO05D004089 4.8e-14 81.3 75 58.7
HanXRQChr14g0460671 Helianthus annuus HOM05D003369 ORTHO05D004089 6.3e-14 80.9 75 57.3
unitig_88.g27820 Utricularia gibba HOM05D003369 ORTHO05D004089 6.3e-14 80.9 75 57.3
Hund05383 Selenicereus undatus HOM05D003369 ORTHO05D004089 8.2e-14 80.5 75 60.0
C04p68490 Brassica napus HOM05D003369 ORTHO05D004089 1.1e-13 80.1 75 56.0
BolC4t28349H Brassica oleracea HOM05D003369 ORTHO05D004089 1.4e-13 79.7 75 56.0
Lalb_Chr06g0168441 Lupinus albus HOM05D003369 ORTHO05D004089 1.4e-13 79.7 75 58.7
Solyc05g052200.4 Solanum lycopersicum HOM05D003369 ORTHO05D004089 1.4e-13 79.7 75 57.3
Sopen05g030740 Solanum pennellii HOM05D003369 ORTHO05D004089 1.4e-13 79.7 75 57.3
EL10Ac3g06746 Beta vulgaris HOM05D003369 ORTHO05D004089 2.4e-13 79.0 75 58.7
CDE07G0902 Ceratophyllum demersum HOM05D003369 ORTHO05D004089 2.4e-13 79.0 74 55.4
Lalb_Chr02g0149401 Lupinus albus HOM05D003369 ORTHO05D004089 3.1e-13 78.6 75 57.3
Potri.013G090500 Populus trichocarpa HOM05D003369 ORTHO05D004089 3.1e-13 78.6 77 59.7
AUR62037781 Chenopodium quinoa HOM05D003369 ORTHO05D004089 4.1e-13 78.2 75 58.7
AUR62042224 Chenopodium quinoa HOM05D003369 ORTHO05D004089 4.1e-13 78.2 75 58.7
MBI15_g39391_MAGBIO Magnolia biondii HOM05D003369 ORTHO05D004089 4.1e-13 78.2 75 57.3
unitig_0.g2517 Utricularia gibba HOM05D003369 ORTHO05D004089 4.1e-13 78.2 75 54.7
COL.COLO4_19461 Corchorus olitorius HOM05D003369 ORTHO05D004089 5.3e-13 77.8 71 57.7
DCAR_005879 Daucus carota HOM05D003369 ORTHO05D004089 5.3e-13 77.8 75 54.7
ATR1127G027 Amborella trichopoda HOM05D003369 ORTHO05D004089 7.0e-13 77.4 75 53.3
Ah.13g075100 Amaranthus hybridus HOM05D003369 ORTHO05D004089 9.1e-13 77.0 75 57.3
DCAR_007356 Daucus carota HOM05D003369 ORTHO05D004089 9.1e-13 77.0 75 54.7
HPP92_018085 Vanilla planifolia HOM05D003369 ORTHO05D004089 1.2e-12 76.6 75 54.7
FAN07G2686 Fragaria x ananassa HOM05D003369 ORTHO05D004089 2.0e-12 75.9 75 54.7
FAN17G2799 Fragaria x ananassa HOM05D003369 ORTHO05D004089 2.0e-12 75.9 75 54.7
Medtr1g078330 Medicago truncatula HOM05D003369 ORTHO05D004089 3.5e-12 75.1 74 54.1
FvH4_4g37220 Fragaria vesca HOM05D003369 ORTHO05D004089 5.9e-12 74.3 75 53.3
HanXRQChr15g0493711 Helianthus annuus HOM05D003369 ORTHO05D004089 1.0e-11 73.6 75 54.7
Potri.019G059200 Populus trichocarpa HOM05D003369 ORTHO05D004089 1.0e-11 73.6 78 52.6
Lsat_1_v5_gn_9_60180 Lactuca sativa HOM05D003369 ORTHO05D004089 1.3e-11 73.2 75 54.7
Mapoly0025s0051 Marchantia polymorpha HOM05D003369 ORTHO05D004089 1.3e-11 73.2 94 44.7
ECA232G1960 Erigeron canadensis HOM05D003369 ORTHO05D004089 1.7e-11 72.8 75 54.7
Pp3c3_22310 Physcomitrium patens HOM05D003369 ORTHO05D004089 2.2e-11 72.4 73 52.1
SalBow3G2694 Salvia bowleyana HOM05D003369 ORTHO05D004089 6.5e-11 70.9 93 46.2
Sabra19G0074300 Salix brachista HOM05D003369 ORTHO05D004089 5.5e-10 67.8 78 53.8
SHI28914 Sapria himalayana HOM05D003369 ORTHO05D004089 1.6e-09 66.2 83 49.4
AagrBONN_evm.TU.Sc2ySwM_117.1623 Anthoceros agrestis HOM05D003369 ORTHO05D004089 3.6e-09 65.1 73 45.2
Mapoly0025s0052 Marchantia polymorpha HOM05D003369 ORTHO05D004089 8.0e-09 63.9 73 46.6
SMO199G0006 Selaginella moellendorffii HOM05D003369 ORTHO05D004089 1.4e-08 63.2 75 45.3
SMO361G0532 Selaginella moellendorffii HOM05D003369 ORTHO05D004089 1.4e-08 63.2 75 45.3
CBR_g49707 Chara braunii HOM05D003369 ORTHO05D004089 3.3e-07 58.5 94 37.2
Rhsim03G0153200 Rhododendron simsii HOM05D003369 ORTHO05D004089 8.2e-06 53.9 38 71.1


User provided reference genes

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