Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 1.1e-170 603.2 313 100.0
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 3.8e-150 535.0 313 88.8
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 1.3e-147 526.6 313 87.9
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 1.9e-141 506.1 313 85.0
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 1.0e-126 457.2 306 77.5
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 2.7e-124 449.1 314 73.9
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 6.1e-124 448.0 302 75.8
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 1.1e-122 443.7 301 75.4
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 2.0e-122 443.0 300 75.0
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 5.7e-122 441.4 308 75.6
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 7.4e-122 441.0 302 74.2
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 1.3e-121 440.3 304 73.0
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 6.3e-121 438.0 309 74.4
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 1.4e-120 436.8 318 73.0
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 2.4e-120 436.0 267 81.6
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 4.1e-120 435.3 306 72.5
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 7.0e-120 434.5 303 73.6
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 7.0e-120 434.5 315 72.1
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 5.9e-119 431.4 313 72.5
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 2.2e-118 429.5 307 73.6
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 3.8e-118 428.7 314 70.1
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 5.5e-117 424.9 283 76.3
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 7.2e-117 424.5 308 69.8
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 1.2e-116 423.7 307 73.6
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 2.1e-116 422.9 303 72.9
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 3.6e-116 422.2 307 72.3
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 8.0e-116 421.0 305 71.8
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.3e-115 419.5 313 69.6
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.3e-115 419.5 313 69.6
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 2.3e-115 419.5 297 72.1
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 5.2e-115 418.3 287 76.0
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 2.0e-114 416.4 306 70.3
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 2.0e-114 416.4 310 69.7
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.3e-114 415.6 305 70.8
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 3.3e-114 415.6 304 70.4
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 3.7e-113 412.1 302 69.5
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 4.8e-113 411.8 310 71.9
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 8.2e-113 411.0 299 71.9
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 3.1e-112 409.1 314 69.4
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 4.1e-112 408.7 263 78.3
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 5.3e-112 408.3 255 80.4
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 9.1e-112 407.5 299 70.9
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 9.1e-112 407.5 304 70.1
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 1.2e-111 407.1 305 68.5
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 5.9e-111 404.8 283 74.6
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 7.7e-111 404.4 294 70.4
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 1.3e-110 403.7 305 68.9
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 2.2e-110 402.9 266 77.1
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 2.9e-110 402.5 312 66.0
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 5.0e-110 401.7 297 69.7
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 1.1e-109 400.6 267 75.3
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 1.5e-109 400.2 263 76.0
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 1.5e-109 400.2 283 71.4
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 1.9e-109 399.8 263 77.9
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 7.2e-109 397.9 294 69.0
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 1.6e-108 396.7 293 69.3
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 1.6e-108 396.7 305 67.5
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 1.6e-108 396.7 307 66.1
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 3.6e-108 395.6 311 69.1
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 1.0e-107 394.0 309 64.4
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.4e-107 393.7 296 70.3
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.8e-107 393.3 306 64.7
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 2.3e-107 392.9 263 74.9
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 2.3e-107 392.9 260 76.2
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 3.0e-107 392.5 309 64.7
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 3.0e-107 392.5 309 65.4
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 2.6e-106 389.4 311 64.0
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 7.5e-106 387.9 302 68.5
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 9.7e-106 387.5 313 64.2
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 1.3e-105 387.1 303 67.0
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 2.8e-105 386.0 345 60.9
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 3.7e-105 385.6 325 63.7
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 6.3e-105 384.8 265 74.7
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 1.1e-104 384.0 311 67.5
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 1.4e-104 383.6 311 65.0
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 2.4e-104 382.9 303 64.4
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 5.3e-104 381.7 303 66.3
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 1.6e-103 380.2 309 64.7
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 7.7e-103 377.9 297 66.3
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 1.7e-102 376.7 250 73.6
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 5.0e-102 375.2 299 65.6
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 5.0e-102 375.2 270 71.9
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 1.5e-101 373.6 334 61.7
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 1.8e-99 366.7 307 63.2
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 4.0e-99 365.5 296 64.2
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 2.8e-97 359.4 288 64.6
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 3.7e-97 359.0 250 73.2
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 1.8e-96 356.7 280 66.1
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 3.1e-96 355.9 305 63.9
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 1.5e-93 347.1 302 60.3
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 2.5e-93 346.3 260 64.6
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 3.3e-93 345.9 263 68.8
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 1.2e-92 344.0 314 58.0
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 5.9e-87 325.1 321 56.1
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 7.8e-87 324.7 301 55.5
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 6.1e-84 315.1 371 53.1
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 2.3e-83 313.2 245 66.5
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 3.1e-83 312.8 243 65.8
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 2.2e-81 306.6 310 53.5
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 2.4e-80 303.1 316 53.2
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 1.6e-79 300.4 252 64.7
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 6.0e-79 298.5 251 62.5
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 3.3e-77 292.7 189 75.7
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 4.1e-72 275.8 209 70.3
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 1.4e-67 260.8 259 52.1
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 1.2e-66 257.7 196 67.9
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 2.6e-66 256.5 165 75.8
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 3.5e-63 246.1 269 47.6
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 3.5e-63 246.1 167 74.9
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 7.3e-61 238.4 259 47.9
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.4e-58 229.2 146 78.1
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 3.2e-56 223.0 265 43.8
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 1.6e-55 220.7 157 74.5
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 2.9e-49 199.9 220 54.1
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 4.5e-34 149.4 144 54.9
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 5.8e-34 149.1 166 52.4
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 1.3e-33 147.9 117 70.1
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.9e-32 144.1 169 51.5
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 5.5e-32 142.5 278 33.1
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 4.6e-31 139.4 167 50.9
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 5.1e-30 136.0 119 64.7
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 4.8e-28 129.4 85 74.1
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 4.0e-27 126.3 84 70.2
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.4e-26 123.2 108 64.8
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 7.6e-26 122.1 69 82.6
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 2.9e-25 120.2 68 82.4
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 3.8e-25 119.8 79 73.4
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 5.5e-24 115.9 205 36.1
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 1.3e-20 104.8 248 31.5
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 2.5e-08 63.9 91 42.9


User provided reference genes

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