Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010409 Sechium edule HOM05D006986 ORTHO05D008714 7.1e-87 323.9 168 100.0
ClCG03G000370 Citrullus lanatus HOM05D006986 ORTHO05D008714 3.2e-71 271.9 167 86.2
MELO3C020513.2 Cucumis melo HOM05D006986 ORTHO05D008714 1.2e-70 270.0 169 86.4
CsaV3_1G036550 Cucumis sativus L. HOM05D006986 ORTHO05D008714 2.7e-70 268.9 169 86.4
GSVIVG01024640001 Vitis vinifera HOM05D006986 ORTHO05D008714 1.1e-36 157.1 156 60.9
Actinidia23203 Actinidia chinensis HOM05D006986 ORTHO05D008714 4.1e-34 148.7 173 52.6
Dinv28693 Davidia involucrata HOM05D006986 ORTHO05D008714 2.0e-33 146.4 173 54.3
Haze_24406 Corylus avellana HOM05D006986 ORTHO05D008714 4.5e-33 145.2 157 55.4
Atru.chr3.4128 Acer truncatum HOM05D006986 ORTHO05D008714 8.5e-32 141.0 154 51.9
Nitab4.5_0000758g0110 Nicotiana tabacum HOM05D006986 ORTHO05D008714 1.1e-31 140.6 174 51.1
Lalb_Chr15g0083221 Lupinus albus HOM05D006986 ORTHO05D008714 1.5e-31 140.2 164 50.0
PGSC0003DMG401031052 Solanum tuberosum HOM05D006986 ORTHO05D008714 3.2e-31 139.0 174 51.7
Sopen03g028830 Solanum pennellii HOM05D006986 ORTHO05D008714 7.2e-31 137.9 174 51.7
Solyc03g098130.3 Solanum lycopersicum HOM05D006986 ORTHO05D008714 3.6e-30 135.6 174 51.1
Nn2g10992 Nelumbo nucifera HOM05D006986 ORTHO05D008714 4.7e-30 135.2 163 53.4
Potri.009G077700 Populus trichocarpa HOM05D006986 ORTHO05D008714 4.7e-30 135.2 181 50.3
QL01p026443 Quercus lobata HOM05D006986 ORTHO05D008714 4.7e-30 135.2 164 50.6
CiPaw.13G069900 Carya illinoinensis HOM05D006986 ORTHO05D008714 6.1e-30 134.8 172 48.8
TAR633G1018 Trochodendron aralioides HOM05D006986 ORTHO05D008714 1.8e-29 133.3 166 49.4
FAN11G3553 Fragaria x ananassa HOM05D006986 ORTHO05D008714 5.2e-29 131.7 155 51.6
FvH4_3g39700 Fragaria vesca HOM05D006986 ORTHO05D008714 8.8e-29 131.0 173 48.0
FAN16G0899 Fragaria x ananassa HOM05D006986 ORTHO05D008714 8.8e-29 131.0 173 48.0
FAN25G2061 Fragaria x ananassa HOM05D006986 ORTHO05D008714 1.2e-28 130.6 154 51.9
Lj6g0005028 Lotus japonicus HOM05D006986 ORTHO05D008714 1.5e-28 130.2 168 48.2
Sabra09G0059300 Salix brachista HOM05D006986 ORTHO05D008714 2.6e-28 129.4 181 49.2
CAN.G637.24 Capsicum annuum HOM05D006986 ORTHO05D008714 9.8e-28 127.5 165 50.9
Manes.18G142700 Manihot esculenta HOM05D006986 ORTHO05D008714 2.2e-27 126.3 153 53.6
Psat5g153400 Pisum sativum HOM05D006986 ORTHO05D008714 3.7e-27 125.6 165 49.7
Ca_15003_v3 Cicer arietinum L. HOM05D006986 ORTHO05D008714 4.8e-27 125.2 165 49.7
Eucgr.B03999 Eucalyptus grandis HOM05D006986 ORTHO05D008714 1.1e-26 124.0 163 46.6
Phvul.006G073400 Phaseolus vulgaris HOM05D006986 ORTHO05D008714 1.8e-26 123.2 164 47.6
Nitab4.5_0000003g0230 Nicotiana tabacum HOM05D006986 ORTHO05D008714 2.4e-26 122.9 157 49.7
vmacro14620 Vaccinium macrocarpon HOM05D006986 ORTHO05D008714 3.1e-26 122.5 162 48.8
Thecc.09G357000 Theobroma cacao HOM05D006986 ORTHO05D008714 4.1e-26 122.1 145 53.1
VMungo0540G2396 Vigna mungo HOM05D006986 ORTHO05D008714 4.1e-26 122.1 164 47.0
Oeu029417.1 Olea europaea HOM05D006986 ORTHO05D008714 1.2e-25 120.6 172 44.8
TAR636G2132 Trochodendron aralioides HOM05D006986 ORTHO05D008714 1.2e-25 120.6 161 48.4
DCAR_007347 Daucus carota HOM05D006986 ORTHO05D008714 2.7e-25 119.4 159 48.4
Thhalv10008798m.g Eutrema salsugineum HOM05D006986 ORTHO05D008714 7.7e-25 117.9 154 49.4
Lsat_1_v5_gn_8_111400 Lactuca sativa HOM05D006986 ORTHO05D008714 7.7e-25 117.9 168 47.6
Ah.08g215140 Amaranthus hybridus HOM05D006986 ORTHO05D008714 2.9e-24 115.9 174 46.0
PGR102G2392 Punica granatum HOM05D006986 ORTHO05D008714 2.9e-24 115.9 180 45.0
Aa31LG1G8070 Aethionema arabicum HOM05D006986 ORTHO05D008714 6.5e-24 114.8 153 46.4
Cfa011771 Carpinus fangiana HOM05D006986 ORTHO05D008714 8.5e-24 114.4 155 47.7
Cc01_g14800 Coffea canephora HOM05D006986 ORTHO05D008714 8.5e-24 114.4 176 48.3
Medtr3g031370 Medicago truncatula HOM05D006986 ORTHO05D008714 8.5e-24 114.4 164 47.0
AUR62009676 Chenopodium quinoa HOM05D006986 ORTHO05D008714 1.1e-23 114.0 176 46.6
Duzib168G0630 Durio zibethinus HOM05D006986 ORTHO05D008714 1.1e-23 114.0 162 45.1
Glyma.11G164400 Glycine max HOM05D006986 ORTHO05D008714 1.1e-23 114.0 166 47.0
arahy.Tifrunner.gnm1.ann1.58BUY7 Arachis hypogaea HOM05D006986 ORTHO05D008714 2.5e-23 112.8 168 46.4
Rhsim01G0240600 Rhododendron simsii HOM05D006986 ORTHO05D008714 2.5e-23 112.8 151 45.0
RcHm_v2.0_Chr5g0071561 Rosa chinensis HOM05D006986 ORTHO05D008714 2.5e-23 112.8 111 59.5
Sp1g05740 Schrenkiella parvula HOM05D006986 ORTHO05D008714 3.2e-23 112.5 155 50.3
unitig_60.g25554 Utricularia gibba HOM05D006986 ORTHO05D008714 3.2e-23 112.5 158 44.9
MD03G1055700 Malus domestica HOM05D006986 ORTHO05D008714 5.5e-23 111.7 177 43.5
Peaxi162Scf00060g00081 Petunia axillaris HOM05D006986 ORTHO05D008714 5.5e-23 111.7 174 45.4
Peaxi162Scf01176g00011 Petunia axillaris HOM05D006986 ORTHO05D008714 5.5e-23 111.7 174 45.4
arahy.Tifrunner.gnm1.ann1.RI1AQ0 Arachis hypogaea HOM05D006986 ORTHO05D008714 7.2e-23 111.3 168 46.4
CDE06G1764 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 9.4e-23 110.9 162 45.7
CDE12G0683 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 9.4e-23 110.9 153 47.7
Cpa.g.sc2.365 Carica papaya HOM05D006986 ORTHO05D008714 2.1e-22 109.8 167 47.3
CDE07G1909 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 2.1e-22 109.8 153 47.1
Peaxi162Scf00154g00045 Petunia axillaris HOM05D006986 ORTHO05D008714 3.6e-22 109.0 178 46.1
HPP92_003693 Vanilla planifolia HOM05D006986 ORTHO05D008714 3.6e-22 109.0 160 41.2
ECA240G2743 Erigeron canadensis HOM05D006986 ORTHO05D008714 4.7e-22 108.6 166 45.8
TWI79G1150 Tripterygium wilfordii HOM05D006986 ORTHO05D008714 6.1e-22 108.2 173 43.4
A08p35810 Brassica napus HOM05D006986 ORTHO05D008714 8.0e-22 107.8 150 50.7
BraA08t35488Z Brassica rapa HOM05D006986 ORTHO05D008714 8.0e-22 107.8 150 50.7
Migut.N00765 Erythranthe guttata HOM05D006986 ORTHO05D008714 8.0e-22 107.8 157 45.9
BcaB03g13411 Brassica carinata HOM05D006986 ORTHO05D008714 1.4e-21 107.1 154 47.4
Sc21g0005260 Simmondsia chinensis HOM05D006986 ORTHO05D008714 1.4e-21 107.1 163 43.6
BolC8t47074H Brassica oleracea HOM05D006986 ORTHO05D008714 1.8e-21 106.7 150 49.3
Glyma.18G057600 Glycine max HOM05D006986 ORTHO05D008714 1.8e-21 106.7 165 44.2
Peaxi162Scf00108g00061 Petunia axillaris HOM05D006986 ORTHO05D008714 3.0e-21 105.9 175 45.1
C08p02790 Brassica napus HOM05D006986 ORTHO05D008714 6.8e-21 104.8 150 48.0
Carub.0001s0631 Capsella rubella HOM05D006986 ORTHO05D008714 1.2e-20 104.0 151 46.4
TPR.G35622 Trifolium pratense HOM05D006986 ORTHO05D008714 1.2e-20 104.0 96 58.3
EL10Ac7g15912 Beta vulgaris HOM05D000133 ORTHO05D000259 3.4e-20 102.4 167 44.3
CARHR006710 Cardamine hirsuta HOM05D006986 ORTHO05D008714 5.7e-20 101.7 152 45.4
HanXRQChr02g0033811 Helianthus annuus HOM05D006986 ORTHO05D008714 9.8e-20 100.9 165 42.4
THA.LOC104800770 Tarenaya hassleriana HOM05D006986 ORTHO05D008714 1.7e-19 100.1 148 45.9
COL.COLO4_11142 Corchorus olitorius HOM05D006986 ORTHO05D008714 2.8e-19 99.4 97 57.7
SGA_v2.0_scaffold120G32953 Striga asiatica HOM05D006986 ORTHO05D008714 1.1e-18 97.4 144 43.1
MSTRG.12687 Avicennia marina HOM05D006986 ORTHO05D008714 1.4e-18 97.1 145 43.4
PSO765G0136 Papaver somniferum HOM05D006986 ORTHO05D008714 1.4e-18 97.1 164 42.1
Prupe.6G049000 Prunus persica HOM05D006986 ORTHO05D008714 1.8e-18 96.7 180 42.8
SalBow2G1752 Salvia bowleyana HOM05D006986 ORTHO05D008714 1.8e-18 96.7 144 45.8
CANSAT54G0324 Cannabis sativa HOM05D006986 ORTHO05D008714 3.1e-18 95.9 178 45.5
AL1G17080 Arabidopsis lyrata HOM05D006986 ORTHO05D008714 5.4e-18 95.1 146 45.9
Ciclev10029398m.g Citrus clementina HOM05D006986 ORTHO05D008714 7.0e-18 94.7 176 45.5
Actinidia32614 Actinidia chinensis HOM05D006986 ORTHO05D008714 9.2e-18 94.4 131 50.4
AUR62001879 Chenopodium quinoa HOM05D006986 ORTHO05D008714 9.2e-18 94.4 165 43.6
Peaxi162Scf00055g00052 Petunia axillaris HOM05D006986 ORTHO05D008714 9.2e-18 94.4 169 44.4
PSO170G2557 Papaver somniferum HOM05D006986 ORTHO05D008714 1.2e-17 94.0 150 44.7
Peaxi162Scf00222g00001 Petunia axillaris HOM05D006986 ORTHO05D008714 1.2e-17 94.0 162 45.1
Hund29010 Selenicereus undatus HOM05D006986 ORTHO05D008714 1.6e-17 93.6 164 42.7
Hund29014 Selenicereus undatus HOM05D006986 ORTHO05D008714 1.6e-17 93.6 164 42.7
Aqoxy1G01299 Aquilegia oxysepala HOM05D006986 ORTHO05D008714 2.0e-17 93.2 157 45.2
Gohir.D03G142700 Gossypium hirsutum HOM05D006986 ORTHO05D008714 2.7e-17 92.8 169 40.2
AT1G07020 Arabidopsis thaliana HOM05D006986 ORTHO05D008714 4.5e-17 92.0 147 46.3
Peaxi162Scf01176g00002 Petunia axillaris HOM05D006986 ORTHO05D008714 1.3e-16 90.5 155 44.5
PSO339G5371 Papaver somniferum HOM05D006986 ORTHO05D008714 2.8e-14 82.8 148 41.9
PSO349G0135 Papaver somniferum HOM05D006986 ORTHO05D008714 4.7e-14 82.0 119 45.4
Gorai.003G149800 Gossypium raimondii HOM05D006986 ORTHO05D008714 8.0e-14 81.3 169 37.9
ATR0174G018 Amborella trichopoda HOM05D006986 ORTHO05D008714 5.2e-13 78.6 166 41.0
Gohir.A03G025800 Gossypium hirsutum HOM05D006986 ORTHO05D008714 3.4e-12 75.9 169 37.3
FvH4_3g21494 Fragaria vesca HOM05D006986 ORTHO05D008714 5.4e-10 68.6 59 55.9
Glyma.06G163400 Glycine max HOM05D006986 ORTHO05D008714 9.5e-07 57.8 50 50.0
Hma1.2p1_1761F.1_g301290 Hydrangea macrophylla HOM05D006986 ORTHO05D008714 1.2e-06 57.4 39 64.1
Hma1.2p1_1761F.1_g301295 Hydrangea macrophylla HOM05D006986 ORTHO05D008714 1.2e-06 57.4 39 64.1


User provided reference genes

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