Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010401 Sechium edule HOM05D007944 ORTHO05D010014 7.4e-56 220.3 113 100.0
ClCG04G011750 Citrullus lanatus HOM05D007944 ORTHO05D010014 1.2e-21 106.7 69 78.3
MELO3C002035.2 Cucumis melo HOM05D007944 ORTHO05D010014 1.6e-21 106.3 69 78.3
Sed0006151 Sechium edule HOM05D007944 ORTHO05D010014 1.0e-20 103.6 69 75.4
Gohir.A03G070400 Gossypium hirsutum HOM05D007944 ORTHO05D010014 2.3e-09 65.9 51 60.8
COL.COLO4_24344 Corchorus olitorius HOM05D007944 ORTHO05D010014 3.1e-09 65.5 48 60.4
CiPaw.11G054400 Carya illinoinensis HOM05D007944 ORTHO05D010014 4.0e-09 65.1 48 64.6
Manes.06G083900 Manihot esculenta HOM05D007944 ORTHO05D010014 4.0e-09 65.1 48 62.5
Phvul.003G184100 Phaseolus vulgaris HOM05D007944 ORTHO05D010014 4.0e-09 65.1 48 58.3
Glyma.05G020300 Glycine max HOM05D007944 ORTHO05D010014 5.2e-09 64.7 48 60.4
Glyma.17G079100 Glycine max HOM05D007944 ORTHO05D010014 5.2e-09 64.7 48 60.4
Gohir.D03G096800 Gossypium hirsutum HOM05D007944 ORTHO05D010014 6.8e-09 64.3 51 58.8
Gorai.003G101600 Gossypium raimondii HOM05D007944 ORTHO05D010014 6.8e-09 64.3 51 58.8
Thecc.03G102900 Theobroma cacao HOM05D007944 ORTHO05D010014 1.2e-08 63.5 48 60.4
Duzib084G0160 Durio zibethinus HOM05D007944 ORTHO05D010014 1.5e-08 63.2 51 58.8
THA.LOC109116171 Tarenaya hassleriana HOM05D007944 ORTHO05D010014 2.6e-08 62.4 51 54.9
Potri.015G058500 Populus trichocarpa HOM05D007944 ORTHO05D010014 4.4e-08 61.6 48 58.3
Ciclev10023235m.g Citrus clementina HOM05D007944 ORTHO05D010014 5.8e-08 61.2 48 60.4
HanXRQChr04g0110041 Helianthus annuus HOM05D007944 ORTHO05D010014 5.8e-08 61.2 48 56.2
Lj4g0027267 Lotus japonicus HOM05D007944 ORTHO05D010014 5.8e-08 61.2 51 56.9
GSVIVG01008105001 Vitis vinifera HOM05D007944 ORTHO05D010014 5.8e-08 61.2 51 52.9
CSS0002657 Camellia sinensis var. sinensis HOM05D007944 ORTHO05D010014 7.5e-08 60.8 48 56.2
CSS0037671 Camellia sinensis var. sinensis HOM05D007944 ORTHO05D010014 7.5e-08 60.8 48 56.2
TWI60G0934 Tripterygium wilfordii HOM05D007944 ORTHO05D010014 7.5e-08 60.8 51 56.9
Ca_21766_v3 Cicer arietinum L. HOM05D007944 ORTHO05D010014 9.9e-08 60.5 50 56.0
HanXRQChr02g0044781 Helianthus annuus HOM05D007944 ORTHO05D010014 9.9e-08 60.5 57 47.4
Lalb_Chr13g0302811 Lupinus albus HOM05D007944 ORTHO05D010014 1.3e-07 60.1 48 54.2
Lsat_1_v5_gn_1_14420 Lactuca sativa HOM05D007944 ORTHO05D010014 1.7e-07 59.7 48 58.3
Lalb_Chr12g0197241 Lupinus albus HOM05D007944 ORTHO05D010014 1.7e-07 59.7 48 52.1
TAR629G2843 Trochodendron aralioides HOM05D007944 ORTHO05D010014 1.7e-07 59.7 46 60.9
THA.LOC104818349 Tarenaya hassleriana HOM05D007944 ORTHO05D010014 2.2e-07 59.3 51 52.9
CANSAT56G0188 Cannabis sativa HOM05D007944 ORTHO05D010014 2.9e-07 58.9 53 54.7
PGSC0003DMG400024536 Solanum tuberosum HOM05D007944 ORTHO05D010014 2.9e-07 58.9 48 56.2
CAN.G1228.17 Capsicum annuum HOM05D007944 ORTHO05D010014 3.7e-07 58.5 48 56.2
MD06G1225800 Malus domestica HOM05D007944 ORTHO05D010014 4.9e-07 58.2 48 58.3
MD14G1212700 Malus domestica HOM05D007944 ORTHO05D010014 4.9e-07 58.2 48 58.3
Aa31LG3G18500 Aethionema arabicum HOM05D000813 ORTHO05D004282 6.4e-07 57.8 46 54.3
Medtr4g109610 Medicago truncatula HOM05D007944 ORTHO05D010014 6.4e-07 57.8 48 52.1
Sc12g0007040 Simmondsia chinensis HOM05D007944 ORTHO05D010014 6.4e-07 57.8 46 56.5
Hma1.2p1_0060F.1_g033020 Hydrangea macrophylla HOM05D007944 ORTHO05D010014 1.1e-06 57.0 48 52.1
Prupe.5G206000 Prunus persica HOM05D007944 ORTHO05D010014 1.1e-06 57.0 48 56.2
AL6G18390 Arabidopsis lyrata HOM05D007944 ORTHO05D010014 1.4e-06 56.6 48 47.9
AT5G08040 Arabidopsis thaliana HOM05D007944 ORTHO05D010014 1.9e-06 56.2 45 51.1
Nn3g17462 Nelumbo nucifera HOM05D007944 ORTHO05D010014 3.2e-06 55.5 48 58.3
PGR083G1417 Punica granatum HOM05D007944 ORTHO05D010014 3.2e-06 55.5 48 52.1
CsaV3_1G006040 Cucumis sativus L. HOM05D007944 ORTHO05D010014 4.1e-06 55.1 69 49.3
FvH4_5g13750 Fragaria vesca HOM05D007944 ORTHO05D010014 4.1e-06 55.1 48 54.2
Aqoxy3G03680 Aquilegia oxysepala HOM05D007944 ORTHO05D010014 5.4e-06 54.7 51 49.0
Carub.0006s0693 Capsella rubella HOM05D007944 ORTHO05D010014 5.4e-06 54.7 48 43.8
Migut.D01638 Erythranthe guttata HOM05D007944 ORTHO05D010014 5.4e-06 54.7 48 50.0
Sp6g34910 Schrenkiella parvula HOM05D000813 ORTHO05D004282 5.4e-06 54.7 48 47.9
RcHm_v2.0_Chr7g0183191 Rosa chinensis HOM05D007944 ORTHO05D010014 7.1e-06 54.3 47 53.2
CARHR205140 Cardamine hirsuta HOM05D007944 ORTHO05D010014 9.2e-06 53.9 48 41.7


User provided reference genes

Program Settings