Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 1.3e-168 596.3 292 100.0
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 1.0e-157 560.1 292 93.5
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 1.5e-156 556.2 292 92.5
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 3.2e-151 538.5 292 87.7
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 5.4e-151 537.7 292 86.6
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 5.4e-151 537.7 290 87.6
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 7.1e-151 537.3 292 88.0
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 9.3e-151 537.0 290 88.6
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 7.9e-150 533.9 292 86.3
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 7.9e-150 533.9 292 86.3
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 2.3e-149 532.3 290 86.6
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 3.0e-149 531.9 292 86.3
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 6.6e-149 530.8 288 85.8
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 6.6e-149 530.8 292 85.3
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 8.7e-149 530.4 290 86.2
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 8.7e-149 530.4 292 85.6
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 8.7e-149 530.4 292 85.6
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 1.1e-148 530.0 292 85.3
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.9e-148 529.3 292 85.3
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.9e-148 529.3 288 85.4
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 2.5e-148 528.9 292 86.0
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 2.5e-148 528.9 290 85.5
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.3e-148 528.5 294 85.7
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 5.6e-148 527.7 292 85.3
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 7.4e-148 527.3 292 85.6
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.3e-147 526.6 292 84.9
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.3e-147 526.6 292 85.3
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.6e-147 526.2 288 85.1
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 1.6e-147 526.2 292 84.6
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 2.1e-147 525.8 292 85.6
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.1e-147 525.8 292 85.6
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 2.8e-147 525.4 290 84.8
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 4.8e-147 524.6 290 84.5
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 4.8e-147 524.6 290 84.5
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 6.2e-147 524.2 292 84.6
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.1e-146 523.5 292 83.9
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.1e-146 523.5 292 85.6
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 1.1e-146 523.5 292 84.9
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.4e-146 523.1 292 84.9
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.4e-146 523.1 292 84.6
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 1.8e-146 522.7 292 84.9
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.8e-146 522.7 290 84.8
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 3.1e-146 521.9 292 83.6
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 3.1e-146 521.9 292 83.6
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 4.0e-146 521.5 292 84.2
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 6.9e-146 520.8 292 83.2
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 6.9e-146 520.8 289 85.8
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 9.0e-146 520.4 292 84.6
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.2e-145 520.0 288 84.4
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.5e-145 519.6 321 77.9
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 1.5e-145 519.6 292 84.9
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 2.0e-145 519.2 290 84.8
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 2.6e-145 518.8 280 86.4
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 2.6e-145 518.8 292 83.9
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 2.6e-145 518.8 290 84.5
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 4.5e-145 518.1 289 84.4
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 4.5e-145 518.1 292 82.5
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 4.5e-145 518.1 292 84.6
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 7.6e-145 517.3 288 83.0
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 9.9e-145 516.9 290 85.2
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.7e-144 516.2 290 84.1
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 2.9e-144 515.4 288 82.6
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 4.9e-144 514.6 289 83.7
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 4.9e-144 514.6 288 83.0
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 8.4e-144 513.8 292 82.9
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 8.4e-144 513.8 292 82.9
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 1.1e-143 513.5 290 83.4
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 1.4e-143 513.1 290 83.4
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.4e-143 513.1 292 83.9
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.9e-143 512.7 284 85.6
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 81.8
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 2.4e-143 512.3 292 83.6
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 4.2e-143 511.5 288 81.9
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.2e-143 511.5 292 84.2
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.2e-142 510.0 290 82.4
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 1.6e-142 509.6 292 81.8
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 2.1e-142 509.2 292 81.2
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 2.1e-142 509.2 292 81.8
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 2.1e-142 509.2 290 82.1
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 4.6e-142 508.1 290 82.4
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.0e-141 506.9 292 82.5
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 2.3e-141 505.8 289 83.7
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 3.0e-141 505.4 290 81.0
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 5.1e-141 504.6 290 80.3
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 5.1e-141 504.6 292 82.9
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 1.9e-140 502.7 313 82.1
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 5.6e-140 501.1 287 82.6
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 7.4e-140 500.7 290 79.3
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 7.4e-140 500.7 290 79.3
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 2.1e-139 499.2 288 79.5
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 2.1e-139 499.2 288 79.5
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 4.8e-139 498.0 287 81.2
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 8.1e-139 497.3 287 79.4
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 2.4e-138 495.7 291 80.1
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 2.0e-137 492.7 289 78.9
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 2.6e-137 492.3 291 80.4
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 3.4e-137 491.9 274 85.8
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 7.6e-137 490.7 278 83.8
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 4.9e-136 488.0 271 85.6
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.9e-135 486.1 272 84.6
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 1.6e-134 483.0 287 79.1
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 3.5e-134 481.9 292 80.1
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 6.0e-134 481.1 290 78.3
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.0e-133 480.3 294 76.2
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 2.5e-132 475.7 251 87.6
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 4.3e-132 474.9 292 79.5
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 9.6e-132 473.8 288 80.2
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 2.2e-128 462.6 272 80.9
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 1.6e-126 456.4 283 74.6
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 3.7e-123 445.3 309 69.3
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 4.8e-123 444.9 292 74.7
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 3.4e-121 438.7 286 71.7
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 3.8e-120 435.3 281 70.5
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 3.0e-117 425.6 271 76.0
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.1e-114 417.2 267 71.9
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 9.1e-114 414.1 271 71.2
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 9.4e-111 404.1 281 66.5
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 4.0e-101 372.1 223 78.9
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 3.7e-99 365.5 321 61.1
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 8.5e-88 327.8 183 85.2
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 4.2e-87 325.5 285 53.3
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 1.8e-85 320.1 207 74.4
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 8.8e-85 317.8 186 81.7
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 4.5e-81 305.4 173 84.4
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 1.7e-80 303.5 294 52.0
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 5.6e-79 298.5 297 52.9
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 4.0e-77 292.4 188 72.9
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 3.9e-72 275.8 293 46.8
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 5.2e-61 238.8 312 45.2
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 1.9e-55 220.3 164 65.9
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 6.8e-53 211.8 224 52.2
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.9e-51 206.5 221 52.0
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 3.0e-48 196.4 106 85.8
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.2e-43 180.3 101 85.1
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.9e-43 179.9 102 83.3
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.7e-40 170.6 96 84.4
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 3.7e-30 136.3 76 84.2
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.7e-22 109.8 96 62.5
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.1e-21 108.2 166 38.0
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 2.1e-09 67.4 51 60.8
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 3.0e-08 63.5 40 82.5


User provided reference genes

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