Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010329 Sechium edule HOM05D005953 ORTHO05D004056 5.6e-26 120.6 79 100.0
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 1.7e-19 99.0 80 67.5
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 6.6e-19 97.1 81 67.9
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 8.7e-19 96.7 80 67.5
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 1.8e-11 72.4 80 61.2
Sed0015284 Sechium edule HOM05D005953 ORTHO05D004056 2.5e-10 68.6 79 58.2
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 8.1e-09 63.5 82 47.6
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 1.4e-08 62.8 81 45.7
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 3.1e-08 61.6 79 46.8
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 4.0e-08 61.2 80 50.0
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 4.0e-08 61.2 79 64.6
Eucgr.A01816 Eucalyptus grandis HOM05D005953 ORTHO05D004056 4.0e-08 61.2 82 57.3
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 5.3e-08 60.8 82 51.2
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 6.9e-08 60.5 79 51.9
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 9.0e-08 60.1 79 46.8
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.2e-07 59.7 79 57.0
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 1.5e-07 59.3 79 57.0
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 2.0e-07 58.9 84 46.4
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 2.0e-07 58.9 79 46.8
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 2.0e-07 58.9 79 46.8
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 2.0e-07 58.9 80 48.8
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 2.6e-07 58.5 79 64.6
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 4.5e-07 57.8 88 45.5
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 5.8e-07 57.4 79 44.3
vmacro12298 Vaccinium macrocarpon HOM05D005953 ORTHO05D004056 5.8e-07 57.4 79 59.5
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 7.6e-07 57.0 79 67.1
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 7.6e-07 57.0 79 44.3
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 7.6e-07 57.0 79 43.0
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 9.9e-07 56.6 82 62.2
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 9.9e-07 56.6 79 43.0
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 1.3e-06 56.2 79 41.8
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 1.3e-06 56.2 80 45.0
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.7e-06 55.8 79 44.3
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 1.7e-06 55.8 79 41.8
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 1.7e-06 55.8 83 45.8
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 1.7e-06 55.8 81 48.1
Cc05_g07120 Coffea canephora HOM05D005953 ORTHO05D004056 2.2e-06 55.5 79 59.5
Peaxi162Scf00206g01011 Petunia axillaris HOM05D005953 ORTHO05D004056 2.2e-06 55.5 79 50.6
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 2.2e-06 55.5 79 55.7
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 2.9e-06 55.1 80 43.8
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 2.9e-06 55.1 79 64.6
Dinv23644 Davidia involucrata HOM05D005953 ORTHO05D004056 2.9e-06 55.1 82 62.2
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 2.9e-06 55.1 82 58.5
CSS0034597 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 3.8e-06 54.7 39 66.7
CSS0043101 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 3.8e-06 54.7 39 66.7
Nitab4.5_0002169g0120 Nicotiana tabacum HOM05D005953 ORTHO05D004056 3.8e-06 54.7 79 53.2
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 4.9e-06 54.3 83 50.6
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 6.4e-06 53.9 79 43.0
Oeu002560.3 Olea europaea HOM05D005953 ORTHO05D004056 6.4e-06 53.9 81 54.3
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 6.4e-06 53.9 79 44.3
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 8.4e-06 53.5 79 44.3


User provided reference genes

Program Settings