Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 1.6e-36 155.6 79 100.0
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 2.7e-28 128.3 79 84.8
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 3.5e-28 127.9 78 85.9
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 1.7e-27 125.6 79 83.5
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 5.3e-16 87.4 75 60.0
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 6.9e-16 87.0 80 58.8
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 1.5e-15 85.9 80 58.8
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 2.0e-15 85.5 80 57.5
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 3.8e-14 81.3 81 59.3
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 4.9e-14 80.9 75 56.0
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 2.4e-13 78.6 75 56.0
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 5.4e-13 77.4 75 52.0
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 7.1e-13 77.0 75 54.7
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 9.3e-13 76.6 80 55.0
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.6e-12 75.9 77 50.6
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 2.1e-12 75.5 78 56.4
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 2.1e-12 75.5 81 54.3
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.5e-12 74.7 77 49.4
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 4.6e-12 74.3 76 57.9
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 6.0e-12 73.9 80 52.5
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 7.9e-12 73.6 75 50.7
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 1.3e-11 72.8 80 52.5
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 1.8e-11 72.4 77 51.9
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 2.3e-11 72.0 75 50.7
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 2.3e-11 72.0 86 55.8
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 3.0e-11 71.6 77 49.4
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 3.9e-11 71.2 81 53.1
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 8.7e-11 70.1 79 51.9
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 8.7e-11 70.1 79 51.9
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 1.1e-10 69.7 75 49.3
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 1.1e-10 69.7 77 44.2
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 4.3e-10 67.8 77 49.4
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.3e-10 67.8 75 50.7
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 5.6e-10 67.4 77 46.8
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 5.6e-10 67.4 81 51.9
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 9.6e-10 66.6 77 48.1
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 1.3e-09 66.2 78 47.4
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 3.7e-09 64.7 67 52.2
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 4.8e-09 64.3 75 50.7
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 6.2e-09 63.9 80 48.8
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 6.2e-09 63.9 81 49.4
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 6.2e-09 63.9 76 48.7
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 1.8e-08 62.4 80 46.2
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 3.1e-08 61.6 78 47.4
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 3.1e-08 61.6 77 45.5
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 4.0e-08 61.2 81 46.9
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.0e-08 61.2 79 48.1
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 6.9e-08 60.5 76 46.1
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 6.9e-08 60.5 78 44.9
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 9.0e-08 60.1 77 46.8
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 9.0e-08 60.1 77 45.5
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.5e-07 59.3 78 43.6
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 1.5e-07 59.3 77 42.9
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 2.0e-07 58.9 74 47.3
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 5.8e-07 57.4 69 47.8
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 9.9e-07 56.6 61 57.4
Gohir.D13G171533 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.3e-06 56.2 81 44.4
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 2.2e-06 55.5 84 47.6
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 2.2e-06 55.5 81 44.4
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 2.2e-06 55.5 81 44.4
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 2.9e-06 55.1 88 38.6
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 2.9e-06 55.1 81 43.2
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 3.8e-06 54.7 77 42.9
Cfa000214 Carpinus fangiana HOM05D007037 ORTHO05D006691 4.9e-06 54.3 77 40.3
Gohir.D13G171150 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.9e-06 54.3 75 44.0
Gorai.013G189700 Gossypium raimondii HOM05D007037 ORTHO05D006691 4.9e-06 54.3 75 44.0
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 4.9e-06 54.3 75 41.3
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 4.9e-06 54.3 78 44.9
Haze_06807 Corylus avellana HOM05D007037 ORTHO05D006691 6.4e-06 53.9 77 40.3


User provided reference genes

Program Settings