Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 2.5e-50 201.8 102 100.0
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 2.7e-49 198.4 102 97.1
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 1.5e-47 192.6 102 94.1
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 5.3e-45 184.1 101 91.1
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 1.2e-44 183.0 101 90.1
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.6e-44 182.6 101 91.1
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 2.0e-44 182.2 97 91.8
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 7.7e-44 180.3 101 88.1
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.3e-43 179.5 102 87.3
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.7e-43 179.1 101 87.1
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.7e-43 179.1 101 87.1
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.7e-43 179.1 101 87.1
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 2.9e-43 178.3 97 88.7
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 6.5e-43 177.2 101 85.1
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 8.5e-43 176.8 101 84.2
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 1.1e-42 176.4 99 85.9
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.5e-42 175.3 101 84.2
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 3.2e-42 174.9 98 87.8
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 7.2e-42 173.7 101 85.1
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 9.4e-42 173.3 96 88.5
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.2e-41 172.9 101 83.2
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 2.1e-41 172.2 100 78.0
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 3.6e-41 171.4 102 84.3
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 3.6e-41 171.4 102 75.5
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 3.6e-41 171.4 100 77.0
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.0e-40 169.9 102 74.5
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.8e-40 169.1 100 76.0
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 2.3e-40 168.7 102 76.5
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 3.0e-40 168.3 101 80.2
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 4.0e-40 167.9 100 83.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 5.2e-40 167.5 101 78.2
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 6.7e-40 167.2 98 80.6
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 8.8e-40 166.8 102 75.5
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.2e-39 166.4 102 76.5
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.2e-39 166.4 100 82.0
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.5e-39 166.0 97 82.5
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 2.0e-39 165.6 97 84.5
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 2.6e-39 165.2 98 80.6
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 2.6e-39 165.2 97 83.5
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 3.3e-39 164.9 97 81.4
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 3.3e-39 164.9 101 79.2
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 3.3e-39 164.9 97 83.5
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 4.4e-39 164.5 100 79.0
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 5.7e-39 164.1 97 83.5
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 5.7e-39 164.1 101 76.2
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 5.7e-39 164.1 98 81.6
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.3e-38 162.9 102 71.6
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.3e-38 162.9 102 71.6
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 2.2e-38 162.2 96 80.2
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 2.2e-38 162.2 101 77.2
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 2.2e-38 162.2 101 77.2
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.2e-38 162.2 101 76.2
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 2.8e-38 161.8 101 77.2
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 3.7e-38 161.4 96 79.2
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 4.8e-38 161.0 95 81.1
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 4.8e-38 161.0 101 76.2
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 4.8e-38 161.0 101 76.2
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 1.1e-37 159.8 100 76.0
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 1.1e-37 159.8 101 75.2
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.4e-37 159.5 100 76.0
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 2.4e-37 158.7 99 78.8
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 3.1e-37 158.3 131 64.1
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.2e-36 156.4 96 76.0
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.2e-36 156.4 96 76.0
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.2e-36 156.4 96 76.0
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.6e-36 156.0 95 76.8
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.6e-36 156.0 93 81.7
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 1.6e-36 156.0 95 74.7
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 2.0e-36 155.6 100 75.0
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 2.0e-36 155.6 99 70.7
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 3.5e-36 154.8 94 74.5
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 5.9e-36 154.1 101 74.3
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 7.7e-36 153.7 93 81.7
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 1.0e-35 153.3 92 79.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 2.2e-35 152.1 102 69.6
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 2.2e-35 152.1 103 72.8
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.9e-35 151.8 145 57.9
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 3.8e-35 151.4 93 79.6
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.9e-34 149.1 103 73.8
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.9e-34 149.1 103 73.8
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 2.5e-34 148.7 95 77.9
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.5e-34 148.7 100 73.0
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.5e-34 148.7 100 73.0
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 5.5e-34 147.5 95 71.6
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 7.2e-34 147.1 93 76.3
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 9.4e-34 146.7 90 78.9
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 4.7e-33 144.4 102 64.7
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 4.7e-33 144.4 103 68.9
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 4.7e-33 144.4 91 73.6
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 7.5e-31 137.1 80 81.2
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 7.5e-31 137.1 81 76.5
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 2.8e-30 135.2 93 71.0
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 3.7e-30 134.8 77 83.1
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.1e-29 133.3 80 80.0
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 2.4e-29 132.1 80 75.0
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 4.1e-29 131.3 78 83.3
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 2.7e-28 128.6 89 65.2
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.0e-27 126.7 91 63.7
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 2.9e-27 125.2 82 72.0
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 5.5e-26 120.9 94 60.6
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 7.2e-26 120.6 91 61.5
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.8e-24 115.9 82 72.0
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 6.8e-24 114.0 97 56.7
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 2.0e-23 112.5 77 75.3
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 2.6e-23 112.1 78 73.1
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 4.9e-22 107.8 92 57.6
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 6.3e-22 107.5 74 67.6
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 6.3e-22 107.5 56 92.9
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 5.4e-21 104.4 58 84.5
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 2.3e-19 99.0 71 63.4
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 3.8e-19 98.2 55 83.6
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.6e-17 92.8 96 52.1
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 7.5e-15 84.0 58 70.7
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 5.4e-13 77.8 46 80.4
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 8.0e-09 63.9 53 60.4
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.5e-07 59.7 45 53.3


User provided reference genes

Program Settings