Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 2.0e-49 198.7 99 100.0
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 2.4e-42 175.3 92 95.7
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 4.1e-42 174.5 92 94.6
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 4.1e-42 174.5 92 94.6
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.5e-36 156.0 99 75.8
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 5.7e-36 154.1 92 81.5
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 5.7e-36 154.1 92 80.4
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.3e-35 152.9 99 74.7
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.7e-35 152.5 92 79.3
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.7e-35 152.5 92 81.5
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 1.7e-35 152.5 92 82.6
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 2.2e-35 152.1 91 83.5
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 2.2e-35 152.1 92 79.3
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 3.7e-35 151.4 91 81.3
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 4.9e-35 151.0 91 79.1
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 4.9e-35 151.0 91 79.1
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 4.9e-35 151.0 91 80.2
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 4.9e-35 151.0 92 80.4
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 6.3e-35 150.6 92 81.5
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 6.3e-35 150.6 92 79.3
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 6.3e-35 150.6 92 81.5
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 8.3e-35 150.2 91 82.4
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 8.3e-35 150.2 92 79.3
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 1.1e-34 149.8 92 80.4
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 1.4e-34 149.4 92 80.4
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 1.4e-34 149.4 92 80.4
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 1.4e-34 149.4 91 79.1
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 1.4e-34 149.4 92 80.4
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 1.8e-34 149.1 110 75.5
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 1.8e-34 149.1 92 80.4
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 1.8e-34 149.1 91 79.1
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 1.8e-34 149.1 90 78.9
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 1.8e-34 149.1 92 78.3
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 2.4e-34 148.7 92 78.3
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 2.4e-34 148.7 91 81.3
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 2.4e-34 148.7 92 76.1
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 3.1e-34 148.3 92 77.2
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 5.4e-34 147.5 92 79.3
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 7.0e-34 147.1 92 80.4
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 7.0e-34 147.1 92 79.3
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 7.0e-34 147.1 92 79.3
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 9.2e-34 146.7 92 77.2
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 9.2e-34 146.7 92 77.2
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 1.2e-33 146.4 92 79.3
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 1.6e-33 146.0 92 78.3
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 2.0e-33 145.6 93 76.3
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 2.0e-33 145.6 92 78.3
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.7e-33 145.2 92 78.3
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.7e-33 145.2 92 78.3
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 2.7e-33 145.2 92 76.1
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 2.7e-33 145.2 92 78.3
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 3.5e-33 144.8 92 77.2
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 3.5e-33 144.8 92 77.2
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 3.5e-33 144.8 92 77.2
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 3.5e-33 144.8 92 76.1
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 4.5e-33 144.4 92 77.2
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 4.5e-33 144.4 92 77.2
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 5.9e-33 144.1 92 76.1
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 5.9e-33 144.1 92 76.1
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 5.9e-33 144.1 92 76.1
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 5.9e-33 144.1 92 77.2
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 5.9e-33 144.1 92 77.2
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 5.9e-33 144.1 92 71.7
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 7.8e-33 143.7 92 76.1
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 7.8e-33 143.7 92 72.8
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 7.8e-33 143.7 92 73.9
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.0e-32 143.3 91 76.9
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 1.0e-32 143.3 92 75.0
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 1.7e-32 142.5 92 75.0
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 2.9e-32 141.7 92 73.9
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 2.9e-32 141.7 92 75.0
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 2.9e-32 141.7 92 75.0
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 3.8e-32 141.4 92 73.9
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 5.0e-32 141.0 90 74.4
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 6.6e-32 140.6 90 74.4
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 6.6e-32 140.6 91 72.5
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 6.6e-32 140.6 90 74.4
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 6.6e-32 140.6 91 73.6
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 8.6e-32 140.2 92 72.8
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 8.6e-32 140.2 95 72.6
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 1.1e-31 139.8 92 73.9
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 1.1e-31 139.8 92 72.8
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 1.1e-31 139.8 92 72.8
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 1.1e-31 139.8 92 72.8
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 1.1e-31 139.8 92 72.8
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 1.1e-31 139.8 92 73.9
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 1.1e-31 139.8 90 74.4
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 1.1e-31 139.8 90 74.4
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.1e-31 139.8 88 78.4
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 1.5e-31 139.4 92 73.9
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 1.5e-31 139.4 92 72.8
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 1.9e-31 139.0 92 70.7
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 3.3e-31 138.3 90 73.3
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 3.3e-31 138.3 92 72.8
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 3.3e-31 138.3 91 73.6
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 3.3e-31 138.3 91 73.6
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 7.3e-31 137.1 92 75.0
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 9.5e-31 136.7 98 70.4
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 2.8e-30 135.2 92 71.7
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 1.8e-29 132.5 96 69.8
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 2.0e-28 129.0 100 66.0
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 5.7e-28 127.5 90 71.1
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 9.8e-28 126.7 90 71.1
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 2.9e-27 125.2 99 68.7
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 6.4e-27 124.0 141 51.8
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 8.3e-27 123.6 81 71.6
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 9.2e-26 120.2 92 70.7
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.0e-24 116.7 94 64.9
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.7e-24 115.9 90 64.4
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 5.0e-24 114.4 88 59.1
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 1.1e-23 113.2 65 87.7
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 1.1e-23 113.2 65 87.7
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 1.5e-23 112.8 71 74.6
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 2.5e-23 112.1 65 86.2
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 2.5e-23 112.1 72 72.2
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 2.1e-22 109.0 89 59.6
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 2.8e-22 108.6 71 69.0
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 2.8e-22 108.6 86 60.5
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 4.7e-22 107.8 69 69.6
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 1.8e-21 105.9 82 58.5
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 1.2e-20 103.2 88 56.8
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 1.3e-19 99.8 90 51.1
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 8.3e-19 97.1 72 61.1
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 4.1e-18 94.7 87 57.5
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 1.5e-15 86.3 79 58.2
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 1.5e-07 59.7 32 84.4
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 4.3e-07 58.2 35 77.1
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.6e-06 56.2 69 39.1


User provided reference genes

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