Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 1.1e-99 366.7 197 100.0
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 1.6e-77 293.1 197 81.7
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 1.7e-76 289.7 199 80.9
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 1.1e-75 287.0 199 80.4
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 2.8e-58 229.2 198 58.6
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 6.9e-57 224.6 197 58.4
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 2.9e-55 219.2 195 62.1
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 1.4e-54 216.9 198 57.6
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.9e-54 216.5 197 56.9
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 5.4e-54 214.9 198 58.6
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 4.6e-53 211.8 200 54.0
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 1.0e-52 210.7 196 58.7
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.3e-52 210.3 194 57.7
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 2.3e-52 209.5 198 56.6
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 3.0e-52 209.1 195 56.9
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 1.1e-51 207.2 189 60.3
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 1.5e-51 206.8 197 56.9
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 1.9e-51 206.5 196 56.1
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 1.9e-51 206.5 198 57.6
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 2.5e-51 206.1 195 54.4
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 7.4e-51 204.5 197 56.9
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 2.1e-50 203.0 198 55.1
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 1.8e-49 199.9 160 64.4
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 1.8e-49 199.9 193 55.4
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 2.4e-49 199.5 199 52.8
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 3.1e-49 199.1 198 54.0
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 6.9e-49 198.0 197 54.8
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 6.9e-49 198.0 196 56.1
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 2.0e-48 196.4 202 51.0
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 2.0e-48 196.4 185 55.1
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 2.6e-48 196.1 170 58.2
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 2.6e-48 196.1 170 58.2
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 5.8e-48 194.9 195 54.4
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 5.8e-48 194.9 202 49.5
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 1.0e-47 194.1 192 53.1
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.7e-47 193.4 167 60.5
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 1.7e-47 193.4 198 55.1
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 2.2e-47 193.0 197 53.3
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 2.9e-47 192.6 200 52.0
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 4.9e-47 191.8 200 53.5
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 6.5e-47 191.4 152 61.8
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 1.4e-46 190.3 192 52.6
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 1.9e-46 189.9 198 51.5
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 3.2e-46 189.1 142 67.6
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.2e-46 188.7 197 53.3
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 4.2e-46 188.7 200 51.5
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 5.5e-46 188.3 187 54.0
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 7.1e-46 188.0 197 53.3
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 2.1e-45 186.4 202 50.0
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 3.5e-45 185.7 221 48.0
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 4.6e-45 185.3 197 51.3
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 6.0e-45 184.9 200 49.0
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 1.1e-43 180.6 200 50.0
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.5e-43 180.3 200 49.0
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 1.5e-43 180.3 150 56.7
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 4.3e-43 178.7 198 51.0
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 4.3e-43 178.7 192 49.0
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 3.7e-42 175.6 191 48.7
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 3.1e-41 172.6 175 54.3
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 3.1e-41 172.6 193 47.7
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 5.3e-41 171.8 137 62.0
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 9.0e-41 171.0 183 52.5
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 9.0e-41 171.0 138 62.3
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 9.0e-41 171.0 173 54.3
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 2.6e-40 169.5 148 59.5
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.3e-39 167.2 200 47.5
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 1.7e-39 166.8 197 50.8
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 8.4e-39 164.5 191 48.7
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 1.4e-38 163.7 168 50.0
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 1.1e-33 147.5 137 54.0
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 1.4e-33 147.1 188 43.1
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 5.9e-32 141.7 140 52.9
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 2.9e-31 139.4 197 40.1
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 2.9e-31 139.4 200 39.5
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 3.2e-30 136.0 182 41.8
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 5.5e-30 135.2 200 40.0
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 7.2e-30 134.8 207 38.2
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 2.1e-29 133.3 200 39.5
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 2.1e-29 133.3 198 42.4
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 2.7e-29 132.9 194 41.2
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 2.7e-29 132.9 203 36.5
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 4.6e-29 132.1 207 37.7
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 7.9e-29 131.3 198 39.4
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 7.9e-29 131.3 198 39.4
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 1.4e-28 130.6 117 55.6
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 1.8e-28 130.2 209 37.8
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 1.8e-28 130.2 179 41.3
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 2.3e-28 129.8 198 39.4
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 6.7e-28 128.3 191 37.7
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 1.1e-27 127.5 134 50.7
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 1.7e-26 123.6 198 38.9
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 1.1e-25 120.9 167 41.3
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 1.1e-25 120.9 201 38.8
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 8.5e-23 111.3 198 36.9
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 4.7e-21 105.5 77 64.9
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 7.4e-19 98.2 121 46.3
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 1.8e-17 93.6 158 35.4
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 1.2e-13 80.9 120 41.7
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 6.1e-13 78.6 140 30.0
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 3.3e-11 72.8 192 25.0
Lalb_Chr04g0250741 Lupinus albus HOM05D007615 ORTHO05D009643 1.8e-09 67.0 46 60.9
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 4.1e-09 65.9 135 34.8
Sed0006200 Sechium edule HOM05D007615 ORTHO05D009643 1.0e-07 61.2 75 54.7
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 1.0e-07 61.2 176 32.4


User provided reference genes

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