Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010182 Sechium edule HOM05D008619 ORTHO05D000090 8.0e-83 312.4 626 100.0
Sed0005043 Sechium edule HOM05D008619 ORTHO05D000090 6.2e-27 126.7 129 59.7
Sed0014539 Sechium edule HOM05D008619 ORTHO05D000090 1.4e-26 125.6 132 56.8
Sed0002057 Sechium edule HOM05D008619 ORTHO05D000090 3.4e-25 120.9 134 56.7
ClCG09G021760 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.7e-24 118.6 132 50.0
Sed0014525 Sechium edule HOM05D008619 ORTHO05D000090 2.3e-21 108.2 131 50.4
ClCG00G006240 Citrullus lanatus HOM05D008619 ORTHO05D000090 3.3e-20 104.4 246 68.3
ClCG01G008120 Citrullus lanatus HOM05D008619 ORTHO05D000090 9.6e-20 102.8 138 49.3
ClCG09G008330 Citrullus lanatus HOM05D008619 ORTHO05D000090 4.0e-18 97.4 78 57.7
Sed0021875 Sechium edule HOM05D008619 ORTHO05D000090 2.0e-17 95.1 145 49.7
ClCG01G008220 Citrullus lanatus HOM05D008619 ORTHO05D000090 7.6e-17 93.2 139 45.3
CsaV3_7G027920 Cucumis sativus L. HOM05D008619 ORTHO05D000090 9.3e-15 86.3 87 48.3
CsaV3_7G027280 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.2e-14 85.9 73 56.2
Sed0025187 Sechium edule HOM05D008619 ORTHO05D000090 1.6e-14 85.5 68 60.3
CsaV3_7G027720 Cucumis sativus L. HOM05D008619 ORTHO05D000090 2.7e-14 84.7 75 53.3
Sed0018285 Sechium edule HOM05D008619 ORTHO05D000090 1.8e-13 82.0 116 44.8
MELO3C028898.2 Cucumis melo HOM05D008619 ORTHO05D000090 3.0e-13 81.3 69 52.2
MELO3C012708.2 Cucumis melo HOM05D008619 ORTHO05D000090 5.1e-13 80.5 132 40.9
CsaV3_7G027240 Cucumis sativus L. HOM05D008619 ORTHO05D000090 5.1e-13 80.5 115 42.6
Eucgr.K03304 Eucalyptus grandis HOM05D000162 ORTHO05D000090 5.1e-13 80.5 131 44.3
CsaV3_7G022190 Cucumis sativus L. HOM05D008619 ORTHO05D000090 6.7e-13 80.1 132 40.9
RcHm_v2.0_Chr6g0289221 Rosa chinensis HOM05D000162 ORTHO05D000090 6.7e-13 80.1 131 42.7
CsaV3_7G027260 Cucumis sativus L. HOM05D008619 ORTHO05D000090 8.7e-13 79.7 75 53.3
Thecc.01G265100 Theobroma cacao HOM05D008619 ORTHO05D000090 1.1e-12 79.3 147 38.1
MELO3C015722.2 Cucumis melo HOM05D008619 ORTHO05D025208 2.5e-12 78.2 61 60.7
RcHm_v2.0_Chr6g0289191 Rosa chinensis HOM05D000162 ORTHO05D000090 5.6e-12 77.0 132 38.6
Sed0014077 Sechium edule HOM05D008619 ORTHO05D000090 1.3e-11 75.9 122 46.7
MD05G1203800 Malus domestica HOM05D008619 ORTHO05D000090 1.6e-11 75.5 62 56.5
FvH4_2g22260 Fragaria vesca HOM05D000162 ORTHO05D000090 1.1e-10 72.8 131 37.4
GSVIVG01000757001 Vitis vinifera HOM05D000162 ORTHO05D000090 1.8e-10 72.0 91 44.0
Atru.chr6.396 Acer truncatum HOM05D000162 ORTHO05D000090 2.4e-10 71.6 70 48.6
Atru.chr6.444 Acer truncatum HOM05D000162 ORTHO05D000090 2.4e-10 71.6 70 48.6
Prupe.8G230100 Prunus persica HOM05D008619 ORTHO05D000090 4.0e-10 70.9 133 39.8
Haze_24551 Corylus avellana HOM05D000162 ORTHO05D000090 5.3e-10 70.5 90 45.6
Atru.chr6.231 Acer truncatum HOM05D000162 ORTHO05D000090 6.9e-10 70.1 71 50.7
QL04p081370 Quercus lobata HOM05D000162 ORTHO05D000090 6.9e-10 70.1 131 38.9
Sed0025833 Sechium edule HOM05D008619 ORTHO05D025208 6.9e-10 70.1 105 41.0
FAN24G2639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.0e-10 69.7 131 36.6
Sed0000927 Sechium edule HOM05D008619 ORTHO05D000090 1.2e-09 69.3 51 62.7
Sed0020881 Sechium edule HOM05D008619 ORTHO05D000090 4.5e-09 67.4 118 39.0
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 9.9e-09 66.2 61 50.8
Actinidia33760 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.3e-08 65.9 91 40.7
Eucgr.K03305 Eucalyptus grandis HOM05D000162 ORTHO05D000090 2.9e-08 64.7 139 38.8
QL12p042932 Quercus lobata HOM05D000162 ORTHO05D000090 2.9e-08 64.7 129 38.0
Atru.chr5.1765 Acer truncatum HOM05D008619 ORTHO05D000090 8.4e-08 63.2 139 30.9
CANSAT11G1734 Cannabis sativa HOM05D000162 ORTHO05D000090 1.4e-07 62.4 71 50.7
Ciclev10024138m.g Citrus clementina HOM05D000162 ORTHO05D000090 1.4e-07 62.4 77 40.3
TWI75G1134 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 2.4e-07 61.6 125 35.2
Ciclev10028053m.g Citrus clementina HOM05D000162 ORTHO05D000090 3.2e-07 61.2 60 46.7
Duzib138G1327 Durio zibethinus HOM05D008619 ORTHO05D000090 3.2e-07 61.2 94 38.3
Eucgr.K03302 Eucalyptus grandis HOM05D000162 ORTHO05D000090 3.2e-07 61.2 125 35.2
Hma1.2p1_0172F.1_g076330 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 5.5e-07 60.5 131 33.6
Lj1P60T47 Lonicera japonica HOM05D008619 ORTHO05D000090 1.6e-06 58.9 139 30.2
Atru.chr6.395 Acer truncatum HOM05D000162 ORTHO05D000090 2.1e-06 58.5 70 44.3
CSS0034526 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 2.1e-06 58.5 62 41.9
CSS0040127 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 2.1e-06 58.5 62 41.9
Gohir.A11G128001 Gossypium hirsutum HOM05D024768 ORTHO05D021044 2.1e-06 58.5 89 38.2
TAR629G0197 Trochodendron aralioides HOM05D000162 ORTHO05D000090 2.7e-06 58.2 96 34.4
CANSAT80G2501 Cannabis sativa HOM05D000162 ORTHO05D000090 3.5e-06 57.8 64 50.0
AUR62032236 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.5e-06 57.8 61 47.5
vmacro02633 Vaccinium macrocarpon HOM05D008619 ORTHO05D000090 6.0e-06 57.0 80 40.0


User provided reference genes

Program Settings