Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010168 Sechium edule HOM05D007418 ORTHO05D009419 1.7e-120 436.0 228 100.0
ClCG03G014480 Citrullus lanatus HOM05D007418 ORTHO05D009419 3.2e-90 335.5 223 81.6
MELO3C029305.2 Cucumis melo HOM05D007418 ORTHO05D009419 7.9e-89 330.9 221 82.4
CsaV3_1G041690 Cucumis sativus L. HOM05D007418 ORTHO05D009419 6.9e-85 317.8 220 79.1
RcHm_v2.0_Chr5g0083721 Rosa chinensis HOM05D007418 ORTHO05D009419 1.3e-62 243.8 205 64.9
FvH4_3g45540 Fragaria vesca HOM05D007418 ORTHO05D009419 1.4e-61 240.4 197 63.5
Prupe.6G003800 Prunus persica HOM05D007418 ORTHO05D009419 3.1e-61 239.2 197 65.0
CANSAT11G2630 Cannabis sativa HOM05D007418 ORTHO05D009419 4.5e-60 235.3 203 63.1
FAN11G0209 Fragaria x ananassa HOM05D007418 ORTHO05D009419 4.7e-57 225.3 197 60.4
MD11G1003800 Malus domestica HOM05D007418 ORTHO05D009419 6.1e-57 224.9 198 59.1
FAN21G2280 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.8e-56 223.4 197 60.4
CiPaw.13G176700 Carya illinoinensis HOM05D007418 ORTHO05D009419 2.6e-55 219.5 219 54.3
FAN25G3222 Fragaria x ananassa HOM05D007418 ORTHO05D009419 5.7e-55 218.4 226 54.9
Cfa019012 Carpinus fangiana HOM05D000059 ORTHO05D000528 7.0e-53 211.5 217 54.8
QL01p009000 Quercus lobata HOM05D007418 ORTHO05D009419 9.1e-53 211.1 225 52.0
Ca_16377_v3 Cicer arietinum L. HOM05D007418 ORTHO05D009419 1.3e-51 207.2 216 52.3
Phvul.001G269400 Phaseolus vulgaris HOM05D007418 ORTHO05D009419 3.2e-50 202.6 187 57.2
arahy.Tifrunner.gnm1.ann1.WR82LC Arachis hypogaea HOM05D007418 ORTHO05D009419 4.2e-50 202.2 204 52.5
Lj6g0008878 Lotus japonicus HOM05D007418 ORTHO05D009419 7.2e-50 201.4 188 57.4
Glyma.04G122600 Glycine max HOM05D007418 ORTHO05D009419 1.2e-49 200.7 221 51.6
Lalb_Chr11g0075981 Lupinus albus HOM05D007418 ORTHO05D009419 3.6e-49 199.1 155 61.3
Eucgr.J01769 Eucalyptus grandis HOM05D007418 ORTHO05D009419 6.1e-49 198.4 181 54.7
arahy.Tifrunner.gnm1.ann1.ZH41ZF Arachis hypogaea HOM05D007418 ORTHO05D009419 8.8e-48 194.5 203 51.2
VMungo0464G0510 Vigna mungo HOM05D007418 ORTHO05D009419 8.8e-48 194.5 190 52.6
Zm00001eb061520 Zea mays HOM05D007418 ORTHO05D009419 1.2e-47 194.1 177 54.2
TPR.G19319 Trifolium pratense HOM05D007418 ORTHO05D009419 3.4e-47 192.6 206 51.5
Actinidia16244 Actinidia chinensis HOM05D007418 ORTHO05D009419 4.4e-47 192.2 221 51.1
Dinv13469 Davidia involucrata HOM05D007418 ORTHO05D009419 4.4e-47 192.2 230 47.8
Nn7g35872 Nelumbo nucifera HOM05D007418 ORTHO05D009419 8.3e-46 188.0 220 47.7
AUR62019167 Chenopodium quinoa HOM05D007418 ORTHO05D009419 1.1e-45 187.6 163 56.4
ECA248G1985 Erigeron canadensis HOM05D007418 ORTHO05D009419 1.1e-45 187.6 188 52.1
HanXRQChr01g0021361 Helianthus annuus HOM05D007418 ORTHO05D009419 5.4e-45 185.3 163 55.8
Medtr3g083530 Medicago truncatula HOM05D007418 ORTHO05D009419 5.4e-45 185.3 210 48.1
PGR119G2313 Punica granatum HOM05D007418 ORTHO05D009419 9.1e-45 184.5 211 49.3
GSVIVG01025464001 Vitis vinifera HOM05D007418 ORTHO05D009419 1.6e-44 183.7 200 51.0
ATR0737G157 Amborella trichopoda HOM05D007418 ORTHO05D009419 2.0e-44 183.3 159 56.6
Manes.05G202800 Manihot esculenta HOM05D007418 ORTHO05D009419 2.0e-44 183.3 212 46.7
Solyc01g044490.4 Solanum lycopersicum HOM05D007418 ORTHO05D009419 1.3e-43 180.6 199 47.7
Psat5g101120 Pisum sativum HOM05D007418 ORTHO05D009419 1.7e-43 180.3 202 51.0
Duzib160G0534 Durio zibethinus HOM05D007418 ORTHO05D009419 2.9e-43 179.5 185 48.1
Sopen01g018620 Solanum pennellii HOM05D007418 ORTHO05D009419 2.9e-43 179.5 199 47.7
Aqoxy1G00469 Aquilegia oxysepala HOM05D002514 ORTHO05D002761 6.5e-43 178.3 216 47.2
CAN.G752.2 Capsicum annuum HOM05D007418 ORTHO05D009419 1.1e-42 177.6 213 45.5
PSO339G6348 Papaver somniferum HOM05D007418 ORTHO05D009419 2.5e-42 176.4 215 48.8
TAR369G1115 Trochodendron aralioides HOM05D007418 ORTHO05D009419 3.2e-42 176.0 218 46.8
PSO384G4713 Papaver somniferum HOM05D007418 ORTHO05D009419 5.5e-42 175.3 215 48.4
COL.COLO4_22858 Corchorus olitorius HOM05D007418 ORTHO05D009419 1.6e-41 173.7 197 47.7
AUR62040906 Chenopodium quinoa HOM05D007418 ORTHO05D009419 2.1e-41 173.3 144 58.3
SalBow2G0815 Salvia bowleyana HOM05D007418 ORTHO05D009419 2.7e-41 172.9 166 53.6
Thhalv10021419m.g Eutrema salsugineum HOM05D007418 ORTHO05D009419 4.7e-41 172.2 202 46.0
MSTRG.20939 Avicennia marina HOM05D007418 ORTHO05D009419 8.0e-41 171.4 163 50.9
CAN.G782.23 Capsicum annuum HOM05D007418 ORTHO05D009419 1.8e-40 170.2 165 49.1
Pp3c1_29390 Physcomitrium patens HOM05D007418 ORTHO05D009419 1.8e-40 170.2 153 55.6
BraA05t22194Z Brassica rapa HOM05D007418 ORTHO05D009419 2.3e-40 169.9 163 49.1
BcaC05g28944 Brassica carinata HOM05D007418 ORTHO05D006651 3.0e-40 169.5 198 44.9
C05p50730 Brassica napus HOM05D007418 ORTHO05D006651 3.0e-40 169.5 198 44.9
BolC5t33821H Brassica oleracea HOM05D007418 ORTHO05D009419 3.0e-40 169.5 198 44.9
Gohir.D05G110400 Gossypium hirsutum HOM05D007418 ORTHO05D009419 3.0e-40 169.5 164 47.6
Gorai.009G114600 Gossypium raimondii HOM05D007418 ORTHO05D009419 3.0e-40 169.5 164 47.6
Thecc.06G017000 Theobroma cacao HOM05D007418 ORTHO05D009419 3.0e-40 169.5 217 42.4
Migut.D02561 Erythranthe guttata HOM05D007418 ORTHO05D009419 4.0e-40 169.1 173 50.3
Gohir.A05G110100 Gossypium hirsutum HOM05D007418 ORTHO05D009419 6.8e-40 168.3 164 47.0
Sp3g14020 Schrenkiella parvula HOM05D007418 ORTHO05D009419 1.2e-39 167.5 168 47.6
AL7G26640 Arabidopsis lyrata HOM05D007418 ORTHO05D009419 2.6e-39 166.4 163 47.2
THA.LOC104817736 Tarenaya hassleriana HOM05D007418 ORTHO05D009419 7.5e-39 164.9 214 44.4
Atru.chr3.2092 Acer truncatum HOM05D007418 ORTHO05D009419 1.3e-38 164.1 226 42.9
Carub.0007s1463 Capsella rubella HOM05D007418 ORTHO05D009419 2.2e-38 163.3 205 44.4
Aa31LG11G8030 Aethionema arabicum HOM05D007418 ORTHO05D009419 2.8e-38 162.9 204 43.6
A05p33720 Brassica napus HOM05D007418 ORTHO05D006651 4.9e-38 162.2 163 48.5
CARHR233880 Cardamine hirsuta HOM05D007418 ORTHO05D009419 4.9e-38 162.2 163 46.0
TWI60G0114 Tripterygium wilfordii HOM05D007418 ORTHO05D009419 6.3e-38 161.8 223 43.0
Haze_07392 Corylus avellana HOM05D007418 ORTHO05D009419 4.1e-37 159.1 335 34.9
AT4G26310 Arabidopsis thaliana HOM05D007418 ORTHO05D009419 5.4e-37 158.7 216 43.5
Mapoly0009s0101 Marchantia polymorpha HOM05D007418 ORTHO05D009419 9.1e-37 157.9 231 46.3
CAN.G132.16 Capsicum annuum HOM05D007418 ORTHO05D009419 1.3e-35 154.1 192 42.7
Oeu023704.1 Olea europaea HOM05D007418 ORTHO05D009419 1.9e-34 150.2 131 55.0
Potri.001G004300 Populus trichocarpa HOM05D007418 ORTHO05D009419 1.9e-34 150.2 204 43.6
Cc01_g03260 Coffea canephora HOM05D007418 ORTHO05D009419 2.5e-34 149.8 137 51.8
Ciclev10016443m.g Citrus clementina HOM05D007418 ORTHO05D009419 3.3e-34 149.4 191 42.4
Lsat_1_v5_gn_1_67260 Lactuca sativa HOM05D007418 ORTHO05D009419 9.5e-34 147.9 209 43.5
Cc01_g00020 Coffea canephora HOM05D007418 ORTHO05D009419 1.6e-33 147.1 130 53.1
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 2.1e-33 146.7 166 47.6
SGA_v2.0_scaffold6G03369 Striga asiatica HOM05D007418 ORTHO05D009419 2.1e-33 146.7 210 41.9
Peaxi162Scf00005g00613 Petunia axillaris HOM05D007418 ORTHO05D009419 2.6e-31 139.8 132 51.5
DCAR_025361 Daucus carota HOM05D007418 ORTHO05D009419 7.5e-31 138.3 123 53.7
Nitab4.5_0004630g0080 Nicotiana tabacum HOM05D007418 ORTHO05D009419 9.8e-31 137.9 178 45.5
Sc06g0004180 Simmondsia chinensis HOM05D007418 ORTHO05D009419 2.4e-29 133.3 154 48.7
MBI04_g37007_MAGBIO Magnolia biondii HOM05D007418 ORTHO05D009419 7.0e-29 131.7 197 39.1
Sabra01G0003000 Salix brachista HOM05D007418 ORTHO05D009419 1.6e-28 130.6 221 39.8
AagrBONN_evm.TU.Sc2ySwM_344.2531 Anthoceros agrestis HOM05D007418 ORTHO05D009419 4.6e-28 129.0 134 49.3
CBR_g28818 Chara braunii HOM05D007418 ORTHO05D009419 2.3e-27 126.7 162 42.6
HPP92_000821 Vanilla planifolia HOM05D007418 ORTHO05D009419 2.9e-27 126.3 130 50.8
unitig_899.g15026 Utricularia gibba HOM05D007418 ORTHO05D009419 5.0e-27 125.6 159 43.4
QL04p006930 Quercus lobata HOM05D007418 ORTHO05D009419 1.9e-26 123.6 93 64.5
vmacro04241 Vaccinium macrocarpon HOM05D007418 ORTHO05D009419 3.1e-24 116.3 287 32.4
Hma1.2p1_0062F.1_g034220 Hydrangea macrophylla HOM05D007418 ORTHO05D009419 1.5e-23 114.0 101 52.5
Nitab4.5_0002351g0010 Nicotiana tabacum HOM05D007418 ORTHO05D009419 1.1e-21 107.8 177 41.8
MD03G1004200 Malus domestica HOM05D007418 ORTHO05D009419 4.6e-20 102.4 174 38.5
FAN16G1782 Fragaria x ananassa HOM05D007418 ORTHO05D009419 1.2e-17 94.4 109 51.4
MCO01G577 Micromonas commoda HOM05D005727 ORTHO05D009419 3.2e-13 79.7 151 30.5
Cre06.g263050 Chlamydomonas reinhardtii HOM05D007418 ORTHO05D009419 8.6e-11 71.6 145 30.3
SHI31291 Sapria himalayana HOM05D007418 ORTHO05D009419 7.3e-10 68.6 99 37.4
Ca_16215_v3 Cicer arietinum L. HOM05D009845 ORTHO05D010624 1.8e-08 63.9 93 43.0
TPR.G6905 Trifolium pratense HOM05D009845 ORTHO05D010624 5.2e-08 62.4 73 45.2
Rhsim13G0232600 Rhododendron simsii HOM05D007418 ORTHO05D009419 1.2e-07 61.2 55 56.4
CSS0038024 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D001339 1.7e-06 57.4 42 64.3


User provided reference genes

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