Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 1.5e-141 506.1 254 100.0
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 1.9e-136 489.2 254 96.9
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 4.3e-136 488.0 254 96.5
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 5.6e-136 487.6 254 96.1
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 1.6e-135 486.1 254 96.1
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 4.2e-123 444.9 254 86.2
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 7.1e-123 444.1 255 86.7
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 7.1e-123 444.1 255 86.7
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 9.3e-123 443.7 254 86.2
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 1.2e-122 443.4 254 84.6
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 1.2e-122 443.4 255 85.9
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 1.6e-122 443.0 254 84.6
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 1.6e-122 443.0 254 84.3
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 2.7e-122 442.2 254 85.0
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 2.7e-122 442.2 256 84.8
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 3.5e-122 441.8 254 85.0
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 4.6e-122 441.4 254 84.6
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 6.0e-122 441.0 254 85.4
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 1.3e-121 439.9 253 85.8
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 1.8e-121 439.5 255 83.9
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 1.8e-121 439.5 255 83.9
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 3.0e-121 438.7 255 85.5
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 3.9e-121 438.3 254 85.4
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 5.1e-121 438.0 254 83.9
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 5.1e-121 438.0 254 84.3
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 6.7e-121 437.6 256 84.0
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 6.7e-121 437.6 254 84.6
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 6.7e-121 437.6 254 83.5
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 1.1e-120 436.8 254 85.4
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 1.5e-120 436.4 254 83.5
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.5e-120 436.4 254 84.3
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 2.5e-120 435.6 255 84.7
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 3.3e-120 435.3 253 84.6
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 5.6e-120 434.5 253 83.4
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 5.6e-120 434.5 253 84.2
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 7.4e-120 434.1 254 83.9
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 9.6e-120 433.7 254 83.9
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 1.3e-119 433.3 254 83.9
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 2.1e-119 432.6 254 83.9
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 2.1e-119 432.6 254 85.0
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 3.7e-119 431.8 254 84.3
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 4.8e-119 431.4 254 82.7
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 6.2e-119 431.0 275 78.9
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 6.2e-119 431.0 254 82.7
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 6.2e-119 431.0 258 83.7
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 8.1e-119 430.6 254 83.9
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 1.1e-118 430.3 259 82.2
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 1.4e-118 429.9 254 83.5
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 1.4e-118 429.9 254 82.3
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.5e-117 426.4 251 82.9
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.5e-117 426.4 251 82.9
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 2.6e-117 425.6 255 83.5
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 4.5e-117 424.9 254 81.1
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 7.6e-117 424.1 258 82.2
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 1.0e-116 423.7 250 81.2
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 1.7e-116 422.9 259 81.9
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 2.2e-116 422.5 258 82.2
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 6.5e-116 421.0 254 78.7
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 6.5e-116 421.0 258 81.4
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 6.5e-116 421.0 263 80.2
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.4e-115 419.9 254 81.5
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 1.9e-115 419.5 256 79.7
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 2.5e-115 419.1 256 80.5
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.5e-115 419.1 254 78.7
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 4.2e-115 418.3 240 83.8
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 7.1e-115 417.5 250 80.8
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 7.1e-115 417.5 250 80.8
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 9.3e-115 417.2 250 81.2
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 1.2e-114 416.8 282 75.2
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 1.6e-114 416.4 256 82.4
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 2.1e-114 416.0 254 79.5
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 4.6e-114 414.8 256 82.0
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 4.6e-114 414.8 254 79.9
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 1.1e-112 410.2 254 79.5
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 1.5e-112 409.8 250 78.4
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 3.3e-112 408.7 281 73.7
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 7.4e-112 407.5 250 78.4
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 1.6e-111 406.4 225 84.4
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 3.1e-110 402.1 232 83.6
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 3.1e-110 402.1 232 83.6
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 4.1e-110 401.7 251 77.3
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 5.3e-110 401.4 226 83.2
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 3.4e-109 398.7 294 68.4
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 2.2e-108 396.0 251 76.5
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 2.9e-108 395.6 249 78.7
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 1.4e-107 393.3 251 75.7
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 2.7e-106 389.0 255 76.1
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 4.6e-106 388.3 252 77.4
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.1e-102 375.6 254 75.6
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 4.1e-102 375.2 254 76.4
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 1.7e-100 369.8 222 80.2
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 4.2e-99 365.2 250 72.0
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 9.4e-99 364.0 254 73.2
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 2.7e-98 362.5 250 71.6
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 3.6e-98 362.1 453 47.7
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 4.6e-98 361.7 209 85.6
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 1.1e-96 357.1 283 68.6
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 2.0e-96 356.3 220 80.9
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 4.3e-96 355.1 212 82.5
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 5.7e-96 354.8 250 69.2
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 6.3e-95 351.3 250 68.8
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 2.0e-93 346.3 250 68.0
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 7.7e-93 344.4 258 71.7
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 3.3e-88 328.9 199 78.4
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 5.7e-88 328.2 251 68.5
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 8.2e-87 324.3 250 64.0
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 3.1e-86 322.4 194 78.9
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 3.1e-86 322.4 209 74.6
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 5.3e-86 321.6 250 66.4
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 9.1e-86 320.9 237 66.2
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 1.4e-81 307.0 254 63.8
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.8e-81 306.6 242 64.9
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 4.8e-79 298.5 206 73.3
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.1e-78 297.4 268 61.6
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 1.7e-76 290.0 250 58.4
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 1.0e-73 280.8 339 51.3
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.4e-73 280.4 254 62.6
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 3.4e-72 275.8 268 56.7
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 4.4e-72 275.4 210 67.6
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 3.7e-71 272.3 161 80.7
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 3.1e-70 269.2 161 82.0
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 1.1e-67 260.8 249 51.0
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 7.2e-67 258.1 208 64.4
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 6.8e-65 251.5 286 51.0
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 4.9e-63 245.4 225 51.6
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 8.3e-63 244.6 170 72.9
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 3.5e-61 239.2 228 53.1
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 1.2e-58 230.7 206 59.7
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 5.2e-57 225.3 145 76.6
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 1.1e-54 217.6 180 62.2
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 3.9e-52 209.1 147 70.1
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 7.5e-48 194.9 116 84.5
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 8.1e-42 174.9 111 71.2
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 8.3e-39 164.9 133 65.4
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 5.4e-38 162.2 91 83.5
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 8.1e-34 148.3 174 49.4
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 1.4e-33 147.5 94 76.6
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 4.1e-30 136.0 254 41.7
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-29 133.7 94 69.1
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 2.5e-11 73.6 53 67.9


User provided reference genes

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