Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 0.0e+00 1459.1 791 100.0
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 5.4e-254 881.3 789 66.5
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 1.3e-239 833.6 796 64.8
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 8.4e-239 830.9 797 61.9
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 7.9e-229 797.7 797 60.2
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 1.7e-69 268.5 889 30.6
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 9.2e-60 236.1 873 28.2
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 7.8e-59 233.0 815 30.7
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 2.3e-55 221.5 875 27.9
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 4.0e-55 220.7 837 29.3
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 5.2e-55 220.3 864 29.3
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 2.2e-53 214.9 906 26.7
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 3.2e-52 211.1 825 26.9
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 7.0e-52 209.9 858 28.7
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 3.6e-48 197.6 762 28.3
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 6.2e-48 196.8 855 27.4
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.2e-46 192.6 854 26.8
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 5.8e-46 190.3 811 28.9
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 9.8e-46 189.5 839 28.1
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 8.3e-45 186.4 842 28.0
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 4.6e-43 180.6 821 28.0
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 4.6e-43 180.6 841 27.8
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 6.0e-43 180.3 822 28.2
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 1.7e-42 178.7 850 28.1
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 1.5e-41 175.6 845 27.6
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 9.5e-41 172.9 821 27.5
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 5.8e-38 163.7 861 25.4
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 1.9e-36 158.7 975 25.3
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 4.1e-36 157.5 820 25.2
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 4.1e-36 157.5 822 26.5
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 7.1e-36 156.8 805 26.8
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 1.2e-35 156.0 808 26.1
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 2.7e-35 154.8 882 25.6
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 1.3e-34 152.5 823 25.4
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 3.0e-34 151.4 839 26.6
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 6.6e-34 150.2 917 28.0
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 1.9e-33 148.7 966 25.3
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 7.3e-33 146.7 838 26.0
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 1.2e-32 146.0 789 25.9
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 4.7e-32 144.1 837 25.3
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 8.1e-32 143.3 895 25.7
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 1.8e-31 142.1 759 25.2
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 2.4e-31 141.7 821 24.5
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 8.9e-31 139.8 290 35.9
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 8.9e-31 139.8 291 37.1
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.5e-30 139.0 997 24.5
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 7.6e-30 136.7 265 34.7
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 7.6e-30 136.7 273 38.5
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.1e-28 132.9 833 25.0
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 3.2e-28 131.3 809 24.4
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 4.2e-28 131.0 840 25.6
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 7.1e-28 130.2 830 25.2
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 9.3e-28 129.8 841 25.6
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.2e-27 129.4 296 33.8
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 1.2e-27 129.4 325 33.5
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 1.2e-27 129.4 786 27.1
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 1.6e-27 129.0 293 33.1
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 2.1e-27 128.6 818 24.2
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 3.5e-27 127.9 818 24.6
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 1.0e-26 126.3 284 34.5
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.3e-26 125.9 842 25.4
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 1.3e-26 125.9 853 24.0
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 1.7e-26 125.6 873 25.0
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 3.9e-26 124.4 835 26.2
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.9e-26 124.4 265 34.7
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 6.6e-26 123.6 610 26.4
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 4.3e-25 120.9 834 24.5
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 5.6e-25 120.6 218 39.0
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 1.3e-24 119.4 300 32.3
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 1.6e-24 119.0 262 34.0
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.6e-24 119.0 308 31.8
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 2.1e-24 118.6 322 33.2
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 2.8e-24 118.2 777 23.0
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 6.2e-24 117.1 141 46.1
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 8.1e-24 116.7 136 47.1
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.1e-23 116.3 218 39.9
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 1.1e-23 116.3 134 50.0
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 1.4e-23 115.9 854 24.8
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 1.8e-23 115.5 292 33.2
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 2.4e-23 115.2 270 36.7
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 3.1e-23 114.8 238 35.3
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 5.3e-23 114.0 270 36.7
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 1.5e-22 112.5 237 35.0
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 2.0e-22 112.1 257 35.0
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 3.4e-22 111.3 372 29.0
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 4.4e-22 110.9 220 39.5
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 2.9e-21 108.2 381 29.4
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 4.9e-21 107.5 281 31.3
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 1.9e-20 105.5 293 33.8
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 2.7e-19 101.7 252 30.2
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 2.7e-19 101.7 251 31.9
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 2.7e-19 101.7 252 30.2
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 2.7e-19 101.7 252 30.2
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 2.7e-19 101.7 251 31.9
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 4.6e-19 100.9 247 31.2
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 4.6e-19 100.9 299 30.1
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 2.3e-18 98.6 248 31.5
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 5.1e-18 97.4 857 23.7
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 6.6e-18 97.1 262 31.7
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 6.6e-18 97.1 100 51.0
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 6.6e-18 97.1 294 28.9
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.1e-17 96.3 222 32.4
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 3.3e-17 94.7 881 25.7
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 4.3e-17 94.4 292 28.1
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.4e-15 89.4 279 26.9
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 9.0e-15 86.7 136 38.2
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 3.4e-14 84.7 125 42.4
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 4.5e-14 84.3 288 29.5
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 5.8e-14 84.0 290 28.6
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 1.7e-13 82.4 161 34.2
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 6.4e-13 80.5 235 29.8
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.1e-12 79.7 231 30.3
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 3.2e-12 78.2 200 30.5
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.7e-11 75.1 268 26.9
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 3.5e-11 74.7 276 30.8
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 7.9e-11 73.6 851 22.7


User provided reference genes

Program Settings