Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 1.5e-272 942.2 471 100.0
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 6.6e-191 671.0 413 84.5
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 4.9e-186 654.8 414 82.4
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 1.4e-172 610.1 346 87.9
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 2.6e-150 536.2 340 77.6
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 3.3e-150 535.8 388 70.4
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 1.4e-148 530.4 354 73.7
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 2.0e-147 526.6 340 76.8
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 2.0e-147 526.6 340 76.8
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 1.0e-146 524.2 351 74.1
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 1.7e-146 523.5 351 74.1
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 2.2e-146 523.1 358 72.1
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 2.9e-146 522.7 348 74.4
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 6.5e-146 521.5 341 74.5
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 8.5e-146 521.2 351 73.2
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 2.7e-144 516.2 351 72.4
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.4e-143 513.8 383 66.8
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 2.3e-143 513.1 381 68.8
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 1.5e-142 510.4 369 68.6
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 2.0e-142 510.0 339 72.9
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 2.2e-141 506.5 343 72.6
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 4.8e-141 505.4 383 66.6
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 8.2e-141 504.6 366 69.4
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 9.1e-140 501.1 342 73.1
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 1.2e-139 500.7 341 72.7
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 2.0e-139 500.0 340 72.1
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 5.9e-139 498.4 340 70.3
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 7.7e-139 498.0 376 67.3
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 1.3e-138 497.3 360 66.9
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 1.3e-138 497.3 361 67.0
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 8.5e-138 494.6 382 66.8
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.1e-137 494.2 412 63.8
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 2.5e-137 493.0 365 68.8
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 7.2e-137 491.5 341 72.1
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 7.2e-137 491.5 338 71.9
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 7.2e-137 491.5 376 66.0
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 1.2e-136 490.7 347 68.9
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 1.6e-136 490.3 330 73.0
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 2.1e-136 490.0 356 68.5
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 8.0e-136 488.0 342 69.6
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 4.0e-135 485.7 344 70.1
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 4.0e-135 485.7 360 68.1
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 1.5e-134 483.8 341 69.5
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 2.0e-134 483.4 343 67.6
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 5.7e-134 481.9 341 69.5
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 3.7e-133 479.2 446 59.0
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 4.8e-133 478.8 332 72.0
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 4.8e-133 478.8 352 68.8
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 1.4e-132 477.2 343 70.0
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 1.2e-131 474.2 346 66.5
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 2.0e-131 473.4 311 74.6
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 2.7e-131 473.0 338 70.1
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 3.5e-131 472.6 340 70.0
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 5.9e-131 471.9 420 61.0
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 1.0e-130 471.1 340 70.0
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 1.3e-130 470.7 346 66.2
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 2.9e-130 469.5 341 67.2
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 2.9e-130 469.5 377 62.6
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 2.9e-130 469.5 377 62.3
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 5.0e-130 468.8 340 69.4
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.1e-129 467.6 412 61.4
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 1.5e-129 467.2 341 67.4
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 2.5e-129 466.5 342 66.1
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 3.2e-129 466.1 409 59.4
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 4.2e-129 465.7 344 66.9
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 5.5e-129 465.3 377 61.5
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 5.5e-129 465.3 377 61.5
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 7.2e-129 464.9 349 66.5
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 1.2e-128 464.2 342 66.1
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 1.6e-128 463.8 341 66.9
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 2.1e-128 463.4 377 61.5
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 6.1e-128 461.8 340 68.5
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 6.8e-127 458.4 348 65.8
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 8.8e-127 458.0 347 65.7
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 8.8e-127 458.0 342 65.5
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 2.6e-126 456.4 345 65.8
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 3.4e-126 456.1 342 64.6
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 7.5e-126 454.9 341 66.6
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 1.7e-125 453.8 360 61.9
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 4.8e-125 452.2 347 67.7
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 2.4e-124 449.9 348 65.2
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 4.1e-124 449.1 341 65.4
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.6e-123 447.2 307 73.0
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.6e-123 447.2 335 68.4
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 7.7e-123 444.9 384 62.0
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 5.0e-122 442.2 340 65.0
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 3.7e-117 426.0 341 62.8
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 1.1e-116 424.5 271 74.9
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 1.4e-116 424.1 302 69.5
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 7.8e-115 418.3 302 68.9
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 1.5e-113 414.1 292 72.6
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 5.2e-111 405.6 309 66.0
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.3e-106 390.2 355 54.1
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 3.3e-105 386.3 309 62.8
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 4.4e-102 375.9 344 54.7
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 8.6e-98 361.7 371 48.8
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.8e-96 356.7 344 51.7
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 7.6e-86 322.0 251 62.2
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 7.1e-84 315.5 354 45.8
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 1.6e-80 304.3 254 58.3
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 5.8e-78 295.8 364 49.7
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 8.7e-74 282.0 246 61.4
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 1.1e-73 281.6 174 78.7
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 3.8e-69 266.5 185 71.9
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 8.4e-69 265.4 354 43.5
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 3.2e-68 263.5 183 67.8
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.3e-66 257.3 417 36.0
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.3e-66 257.3 417 36.0
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 7.6e-62 242.3 409 34.2
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 2.8e-56 223.8 196 56.1
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 4.0e-55 219.9 388 37.1
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 3.8e-53 213.4 518 28.4
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 1.3e-45 188.3 172 54.7
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 2.1e-43 181.0 383 33.7
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 2.5e-41 174.1 186 47.3
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 5.5e-36 156.4 115 59.1
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 2.0e-17 94.7 71 64.8
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.2e-16 91.3 177 33.3
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.7e-16 90.5 191 35.1
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 4.1e-15 87.0 169 32.5
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 7.7e-14 82.8 61 62.3
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 1.0e-13 82.4 58 69.0
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.2e-12 77.4 171 31.0
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 8.0e-11 72.8 55 69.1
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 1.0e-10 72.4 92 47.8
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 8.8e-10 69.3 58 62.1


User provided reference genes

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