Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 8.1e-272 939.9 496 100.0
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 8.3e-184 647.5 559 68.0
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 7.7e-182 641.0 504 72.8
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 2.5e-172 609.4 561 64.0
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 7.5e-169 597.8 561 63.3
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.2e-121 441.0 377 70.0
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 1.6e-73 281.2 602 39.7
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 6.3e-67 259.2 587 35.4
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.7e-65 253.8 577 36.0
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.7e-65 253.8 577 36.0
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 7.3e-63 245.7 569 36.0
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 1.4e-61 241.5 599 33.9
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 1.5e-60 238.0 749 31.5
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 2.6e-60 237.3 525 35.8
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 7.5e-60 235.7 557 34.1
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 1.8e-58 231.1 610 35.1
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 2.4e-58 230.7 771 30.2
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 7.8e-57 225.7 601 32.6
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 1.7e-56 224.6 574 34.0
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 2.3e-56 224.2 562 35.8
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 2.3e-56 224.2 556 34.5
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 5.0e-56 223.0 537 35.2
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 1.1e-55 221.9 575 34.3
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 1.9e-55 221.1 560 33.6
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 7.3e-55 219.2 683 31.5
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 7.3e-55 219.2 577 35.2
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 4.0e-53 213.4 568 35.0
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 6.8e-53 212.6 573 32.8
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 2.6e-52 210.7 550 34.2
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.6e-52 210.7 575 33.4
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 4.4e-52 209.9 703 30.9
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 9.8e-52 208.8 606 32.2
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.3e-51 208.4 545 33.9
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 2.9e-51 207.2 559 32.0
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 2.4e-50 204.1 551 34.3
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 5.4e-50 203.0 575 32.2
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 1.6e-49 201.4 536 33.8
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 3.5e-49 200.3 537 34.1
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 4.6e-49 199.9 550 32.5
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 6.0e-49 199.5 590 31.9
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 6.0e-49 199.5 547 33.8
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.0e-48 198.7 592 32.6
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 1.3e-48 198.4 590 33.6
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 2.3e-48 197.6 554 34.5
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 5.0e-48 196.4 590 32.4
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 5.0e-48 196.4 658 30.1
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 6.6e-48 196.1 580 33.3
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 4.3e-47 193.4 678 30.7
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 4.3e-47 193.4 598 32.3
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 1.8e-45 188.0 543 33.5
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 3.1e-45 187.2 563 30.6
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 8.9e-45 185.7 563 33.2
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 5.8e-44 183.0 513 32.9
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 2.2e-43 181.0 726 29.2
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 2.9e-43 180.6 520 32.7
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 8.3e-43 179.1 564 31.2
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 1.1e-42 178.7 471 34.0
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 1.1e-42 178.7 584 31.2
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 1.1e-42 178.7 564 31.4
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 1.4e-42 178.3 495 33.7
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 1.4e-42 178.3 506 31.8
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 2.4e-42 177.6 582 31.3
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 5.4e-42 176.4 582 30.2
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 7.1e-42 176.0 576 31.8
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 6.0e-41 172.9 499 32.5
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 6.0e-41 172.9 575 32.0
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 1.0e-40 172.2 679 28.1
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 1.3e-40 171.8 691 28.2
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 1.1e-39 168.7 515 31.3
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 1.5e-39 168.3 562 30.6
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 1.9e-39 167.9 597 30.2
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 4.3e-39 166.8 547 29.8
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 7.3e-39 166.0 512 31.1
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 4.7e-38 163.3 511 31.5
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 6.2e-38 162.9 485 32.4
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 1.1e-37 162.2 555 29.7
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 1.8e-37 161.4 229 46.7
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.4e-37 161.0 608 29.3
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 3.4e-36 157.1 615 29.1
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 4.4e-36 156.8 523 31.0
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.7e-35 154.8 599 29.9
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 2.2e-35 154.5 587 28.3
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 2.9e-35 154.1 598 29.6
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 1.9e-34 151.4 568 30.1
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 4.6e-33 146.7 526 28.7
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 2.3e-32 144.4 512 29.7
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 2.8e-30 137.5 593 28.8
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 2.8e-30 137.5 607 30.6
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 3.6e-30 137.1 563 28.8
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 1.8e-29 134.8 639 27.7
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 3.1e-29 134.0 626 27.8
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 3.4e-28 130.6 190 42.6
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 7.6e-28 129.4 644 28.0
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.7e-27 128.3 269 37.9
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 4.9e-27 126.7 564 27.8
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 1.4e-26 125.2 771 25.4
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 1.6e-25 121.7 574 28.2
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 1.6e-25 121.7 565 27.3
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 2.1e-25 121.3 146 48.6
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 2.7e-25 120.9 592 27.5
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 3.5e-25 120.6 579 26.4
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 3.5e-25 120.6 197 40.1
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 3.5e-25 120.6 122 51.6
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 4.6e-25 120.2 197 40.1
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 6.0e-25 119.8 559 29.5
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 6.0e-25 119.8 700 26.1
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 7.8e-25 119.4 605 28.1
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 7.8e-25 119.4 274 35.8
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 1.0e-24 119.0 479 27.8
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 1.3e-24 118.6 591 27.4
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 1.3e-24 118.6 479 28.2
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 6.6e-24 116.3 585 27.5
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 6.6e-24 116.3 585 27.5
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 8.7e-24 115.9 514 27.6
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 1.1e-23 115.5 583 26.9
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 1.5e-23 115.2 105 60.0
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 1.9e-23 114.8 596 26.2
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 9.6e-23 112.5 775 24.6
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 2.8e-22 110.9 534 27.3
Haze_24989 Corylus avellana HOM05D004831 ORTHO05D003975 6.2e-22 109.8 228 42.1
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 8.1e-22 109.4 586 26.3
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 4.0e-21 107.1 581 25.0
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 9.0e-21 105.9 106 52.8
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 3.4e-20 104.0 378 33.3
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 1.3e-19 102.1 231 36.4
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 2.9e-19 100.9 130 43.1
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 4.9e-19 100.1 126 46.0
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 1.9e-18 98.2 249 32.5
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 1.2e-17 95.5 114 48.2
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.1e-15 89.0 124 44.4
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 2.5e-15 87.8 289 33.2
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 4.3e-15 87.0 89 51.7
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 5.6e-15 86.7 129 44.2
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 7.4e-15 86.3 83 50.6
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 1.1e-13 82.4 158 37.3
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 3.1e-13 80.9 96 46.9
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 3.8e-11 73.9 161 36.0
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 6.4e-11 73.2 116 41.4
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 1.9e-10 71.6 387 25.6
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 8.7e-08 62.8 160 30.0
Cre02.g079250 Chlamydomonas reinhardtii HOM05D004831 ORTHO05D003975 4.8e-06 57.0 164 34.1


User provided reference genes

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