Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009895 Sechium edule HOM05D004223 ORTHO05D004792 7.1e-201 703.7 361 100.0
MELO3C002724.2 Cucumis melo HOM05D004223 ORTHO05D004792 1.3e-149 533.5 357 79.0
ClCG03G006980 Citrullus lanatus HOM05D004223 ORTHO05D004792 1.9e-145 519.6 424 68.9
CsaV3_1G032560 Cucumis sativus L. HOM05D004223 ORTHO05D004792 5.5e-137 491.5 297 85.5
Dinv32277 Davidia involucrata HOM05D004223 ORTHO05D004792 2.5e-105 386.3 349 63.6
MD05G1287300 Malus domestica HOM05D004223 ORTHO05D004792 4.7e-104 382.1 361 60.4
Prupe.4G077600 Prunus persica HOM05D004223 ORTHO05D004792 6.2e-104 381.7 357 61.3
RcHm_v2.0_Chr5g0013511 Rosa chinensis HOM05D004223 ORTHO05D004792 2.6e-102 376.3 362 59.4
QL05p059118 Quercus lobata HOM05D004223 ORTHO05D004792 1.3e-101 374.0 350 59.7
FvH4_3g05960 Fragaria vesca HOM05D004223 ORTHO05D004792 2.2e-101 373.2 362 58.8
MD10G1264700 Malus domestica HOM05D004223 ORTHO05D004792 2.2e-101 373.2 359 60.2
Actinidia19511 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.4e-100 370.5 359 59.6
Oeu019944.1 Olea europaea HOM05D004223 ORTHO05D004792 4.1e-100 369.0 347 59.7
Thecc.06G153700 Theobroma cacao HOM05D004223 ORTHO05D004792 6.6e-98 361.7 356 59.6
Actinidia07682 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.9e-97 360.1 362 59.4
Ciclev10015725m.g Citrus clementina HOM05D004223 ORTHO05D004792 2.5e-97 359.8 350 57.4
GSVIVG01021418001 Vitis vinifera HOM05D004223 ORTHO05D004792 9.5e-97 357.8 357 57.4
arahy.Tifrunner.gnm1.ann1.EM1NUG Arachis hypogaea HOM05D004223 ORTHO05D004792 1.2e-96 357.5 356 57.3
arahy.Tifrunner.gnm1.ann1.KB83YE Arachis hypogaea HOM05D004223 ORTHO05D004792 3.6e-96 355.9 356 57.0
Solyc02g070860.4 Solanum lycopersicum HOM05D004223 ORTHO05D004792 1.8e-95 353.6 356 57.6
Sopen02g019940 Solanum pennellii HOM05D004223 ORTHO05D004792 6.8e-95 351.7 356 57.0
Duzib235G1300 Durio zibethinus HOM05D004223 ORTHO05D004792 1.5e-94 350.5 336 59.2
Manes.17G067700 Manihot esculenta HOM05D004223 ORTHO05D004792 2.6e-94 349.7 350 58.0
Gohir.D10G040000 Gossypium hirsutum HOM05D004223 ORTHO05D004792 3.4e-94 349.4 358 56.4
Gorai.011G042100 Gossypium raimondii HOM05D004223 ORTHO05D004792 3.4e-94 349.4 358 56.4
Migut.H01375 Erythranthe guttata HOM05D004223 ORTHO05D004792 2.2e-93 346.7 355 56.9
Nn3g20665 Nelumbo nucifera HOM05D004223 ORTHO05D004792 8.4e-93 344.7 350 54.0
Gohir.A10G039200 Gossypium hirsutum HOM05D004223 ORTHO05D004792 2.4e-92 343.2 349 56.2
Migut.M00929 Erythranthe guttata HOM05D004223 ORTHO05D004792 3.2e-92 342.8 341 57.2
CiPaw.10G093300 Carya illinoinensis HOM05D004223 ORTHO05D004792 1.2e-91 340.9 355 55.5
CAN.G257.3 Capsicum annuum HOM05D004223 ORTHO05D004792 1.6e-91 340.5 356 55.9
PGR042G0116 Punica granatum HOM05D004223 ORTHO05D004792 2.1e-91 340.1 347 55.9
CANSAT35G1433 Cannabis sativa HOM05D004223 ORTHO05D004792 8.6e-90 334.7 358 54.5
Cc09_g08890 Coffea canephora HOM05D004223 ORTHO05D004792 1.5e-89 334.0 348 55.2
Lalb_Chr12g0208891 Lupinus albus HOM05D004223 ORTHO05D004792 3.3e-89 332.8 351 55.8
Lj4g0000090 Lotus japonicus HOM05D004223 ORTHO05D004792 4.3e-89 332.4 350 53.7
HanXRQChr04g0118281 Helianthus annuus HOM05D004223 ORTHO05D004792 9.6e-89 331.3 352 56.0
Phvul.002G194500 Phaseolus vulgaris HOM05D004223 ORTHO05D004792 9.6e-89 331.3 351 54.4
Aqoxy1G01765 Aquilegia oxysepala HOM05D004223 ORTHO05D004792 3.6e-88 329.3 355 51.8
Sc05g0006430 Simmondsia chinensis HOM05D004223 ORTHO05D004792 4.7e-88 328.9 356 53.1
Lsat_1_v5_gn_7_32901 Lactuca sativa HOM05D004223 ORTHO05D004792 8.9e-87 324.7 347 55.0
FAN11G3669 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.2e-86 324.3 399 50.1
PSO541G2658 Papaver somniferum HOM05D004223 ORTHO05D004792 1.2e-86 324.3 362 51.7
DCAR_027947 Daucus carota HOM05D004223 ORTHO05D004792 2.6e-86 323.2 357 53.8
PSO675G0042 Papaver somniferum HOM05D004223 ORTHO05D004792 2.6e-86 323.2 362 51.4
Cfa023352 Carpinus fangiana HOM05D004223 ORTHO05D004792 1.3e-85 320.9 352 51.1
Glyma.08G084000 Glycine max HOM05D004223 ORTHO05D004792 2.2e-85 320.1 341 52.2
Ciclev10031935m.g Citrus clementina HOM05D004223 ORTHO05D004792 3.8e-85 319.3 359 51.3
Glyma.05G129300 Glycine max HOM05D004223 ORTHO05D004792 5.4e-84 315.5 340 51.8
TWI53G0125 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 1.6e-83 313.9 335 55.2
Dinv30715 Davidia involucrata HOM05D004223 ORTHO05D004792 1.7e-82 310.5 303 61.7
Nitab4.5_0001655g0250 Nicotiana tabacum HOM05D004223 ORTHO05D004792 1.7e-82 310.5 450 46.2
Medtr4g096650 Medicago truncatula HOM05D004223 ORTHO05D004792 9.6e-81 304.7 350 51.7
EL10Ac8g19745 Beta vulgaris HOM05D004223 ORTHO05D004792 4.8e-80 302.4 390 48.5
ECA236G2733 Erigeron canadensis HOM05D004223 ORTHO05D004792 1.1e-79 301.2 295 58.3
VMungo0251G1974 Vigna mungo HOM05D004223 ORTHO05D004792 1.4e-79 300.8 314 54.5
Potri.005G203600 Populus trichocarpa HOM05D004223 ORTHO05D004792 1.8e-79 300.4 343 49.9
TPR.G4831 Trifolium pratense HOM05D004223 ORTHO05D004792 5.3e-79 298.9 350 52.0
TWI59G0075 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 9.0e-79 298.1 359 49.9
Lsat_1_v5_gn_7_7501 Lactuca sativa HOM05D004223 ORTHO05D004792 4.5e-78 295.8 338 53.3
Potri.002G058500 Populus trichocarpa HOM05D004223 ORTHO05D004792 9.9e-78 294.7 354 48.9
Psat7g090920 Pisum sativum HOM05D004223 ORTHO05D004792 2.9e-77 293.1 350 50.3
CiPaw.09G126400 Carya illinoinensis HOM05D004223 ORTHO05D004792 3.2e-76 289.7 244 64.8
Duzib133G0675 Durio zibethinus HOM05D004223 ORTHO05D004792 9.3e-76 288.1 322 50.9
FvH4_6g38510 Fragaria vesca HOM05D004223 ORTHO05D004792 1.6e-75 287.3 361 47.9
MD17G1137300 Malus domestica HOM05D004223 ORTHO05D004792 6.0e-75 285.4 357 49.6
Os01g0751300 Oryza sativa ssp. japonica HOM05D004223 ORTHO05D004792 6.0e-75 285.4 349 48.4
Thecc.01G170900 Theobroma cacao HOM05D004223 ORTHO05D004792 6.0e-75 285.4 342 49.4
Rhsim02G0155900 Rhododendron simsii HOM05D004223 ORTHO05D004792 7.9e-75 285.0 285 58.6
RcHm_v2.0_Chr2g0151741 Rosa chinensis HOM05D004223 ORTHO05D004792 3.0e-74 283.1 350 49.1
Prupe.3G175100 Prunus persica HOM05D004223 ORTHO05D004792 8.7e-74 281.6 353 48.7
SalBow8G4695 Salvia bowleyana HOM05D004223 ORTHO05D004792 1.5e-73 280.8 413 44.3
SalBow8G5598 Salvia bowleyana HOM05D004223 ORTHO05D004792 1.5e-73 280.8 413 44.3
ATR0585G108 Amborella trichopoda HOM05D004223 ORTHO05D004792 3.3e-73 279.6 322 49.1
Ca_06273_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 3.3e-73 279.6 332 49.4
TPR.G12676 Trifolium pratense HOM05D004223 ORTHO05D004792 2.8e-72 276.6 358 46.6
unitig_92.g28154 Utricularia gibba HOM05D004223 ORTHO05D004792 6.2e-72 275.4 343 48.1
Nitab4.5_0001040g0160 Nicotiana tabacum HOM05D004223 ORTHO05D004792 1.1e-71 274.6 416 45.9
Duzib160G0026 Durio zibethinus HOM05D004223 ORTHO05D004792 2.4e-71 273.5 349 47.6
Zm00001eb153380 Zea mays HOM05D004223 ORTHO05D004792 2.4e-71 273.5 355 47.0
MELO3C019676.2 Cucumis melo HOM05D004223 ORTHO05D004792 1.2e-70 271.2 365 46.8
Gorai.001G092500 Gossypium raimondii HOM05D004223 ORTHO05D004792 3.4e-70 269.6 354 47.5
ClCG02G018450 Citrullus lanatus HOM05D004223 ORTHO05D004792 1.3e-69 267.7 364 46.2
Atru.chr6.2065 Acer truncatum HOM05D004223 ORTHO05D004792 2.2e-69 266.9 308 50.6
AL5G40980 Arabidopsis lyrata HOM05D004223 ORTHO05D004792 2.9e-69 266.5 361 44.3
THA.LOC104803347 Tarenaya hassleriana HOM05D004223 ORTHO05D004792 2.9e-69 266.5 357 43.7
Gohir.A07G080900 Gossypium hirsutum HOM05D004223 ORTHO05D004792 4.9e-69 265.8 354 46.9
TAR624G0476 Trochodendron aralioides HOM05D004223 ORTHO05D004792 4.9e-69 265.8 251 57.8
Medtr5g091370 Medicago truncatula HOM05D004223 ORTHO05D004792 6.4e-69 265.4 348 46.0
AT3G59090 Arabidopsis thaliana HOM05D004223 ORTHO05D004792 1.1e-68 264.6 364 44.0
BraA07t30092Z Brassica rapa HOM05D000230 ORTHO05D000176 1.9e-68 263.8 352 45.5
QL08p044806 Quercus lobata HOM05D004223 ORTHO05D004792 9.3e-68 261.5 302 51.7
Aa31LG1G24730 Aethionema arabicum HOM05D004223 ORTHO05D004792 1.6e-67 260.8 357 45.7
Sp5g03900 Schrenkiella parvula HOM05D004223 ORTHO05D004792 3.5e-67 259.6 359 43.2
SGA_v2.0_scaffold1G00153 Striga asiatica HOM05D004223 ORTHO05D004792 6.0e-67 258.8 342 48.2
Sed0004086 Sechium edule HOM05D004223 ORTHO05D004792 7.9e-67 258.5 352 47.2
CsaV3_6G013790 Cucumis sativus L. HOM05D004223 ORTHO05D004792 2.3e-66 256.9 364 45.6
Carub.0005s2585 Capsella rubella HOM05D004223 ORTHO05D004792 1.5e-65 254.2 359 43.5
AUR62030243 Chenopodium quinoa HOM05D004223 ORTHO05D004792 2.5e-65 253.4 345 47.2
CARHR169510 Cardamine hirsuta HOM05D004223 ORTHO05D004792 5.6e-65 252.3 360 43.1
MSTRG.7472 Avicennia marina HOM05D004223 ORTHO05D004792 7.4e-65 251.9 269 55.4
BcaC07g40242 Brassica carinata HOM05D004223 ORTHO05D004792 7.4e-65 251.9 351 43.6
C08p34260 Brassica napus HOM05D004223 ORTHO05D004792 1.6e-64 250.8 351 43.6
Sed0020532 Sechium edule HOM05D004223 ORTHO05D004792 1.6e-64 250.8 349 45.6
C06p25880 Brassica napus HOM05D000230 ORTHO05D000176 2.8e-64 250.0 351 43.3
BolC6t37750H Brassica oleracea HOM05D000230 ORTHO05D000176 2.8e-64 250.0 351 43.3
A07p24480 Brassica napus HOM05D000230 ORTHO05D000176 4.8e-64 249.2 351 43.3
Pp3c6_6380 Physcomitrium patens HOM05D004223 ORTHO05D004792 6.2e-64 248.8 320 45.0
PGR042G1019 Punica granatum HOM05D004223 ORTHO05D004792 1.8e-63 247.3 333 45.9
Gohir.D07G086500 Gossypium hirsutum HOM05D004223 ORTHO05D004792 5.3e-63 245.7 354 44.6
Thhalv10006050m.g Eutrema salsugineum HOM05D004223 ORTHO05D004792 6.9e-63 245.4 360 42.2
HPP92_021479 Vanilla planifolia HOM05D004223 ORTHO05D004792 1.0e-61 241.5 341 46.0
Psat2g016680 Pisum sativum HOM05D004223 ORTHO05D004792 1.3e-61 241.1 302 48.0
BraA09t40587Z Brassica rapa HOM05D004223 ORTHO05D004792 1.4e-60 237.7 358 41.9
BcaC08g44958 Brassica carinata HOM05D000230 ORTHO05D000176 5.5e-60 235.7 350 42.3
Pp3c5_22420 Physcomitrium patens HOM05D004223 ORTHO05D004792 5.5e-60 235.7 330 44.5
BolC8t51023H Brassica oleracea HOM05D004223 ORTHO05D004792 9.3e-60 235.0 385 39.7
Mapoly0056s0052 Marchantia polymorpha HOM05D004223 ORTHO05D004792 2.1e-59 233.8 319 44.5
BcaC07g40241 Brassica carinata HOM05D004223 ORTHO05D004792 1.8e-58 230.7 350 42.9
Actinidia39561 Actinidia chinensis HOM05D004223 ORTHO05D004792 7.4e-57 225.3 323 47.4
A09p51500 Brassica napus HOM05D004223 ORTHO05D004792 2.1e-56 223.8 354 40.4
DCAR_003936 Daucus carota HOM05D004223 ORTHO05D004792 3.7e-56 223.0 255 53.7
Ah.14g086580 Amaranthus hybridus HOM05D004223 ORTHO05D004792 6.3e-56 222.2 269 51.3
SGA_v2.0_scaffold333G49006 Striga asiatica HOM05D004223 ORTHO05D004792 3.1e-55 219.9 346 43.4
Pp3c25_8320 Physcomitrium patens HOM05D004223 ORTHO05D004792 4.1e-55 219.5 322 41.9
Oeu046871.2 Olea europaea HOM05D004223 ORTHO05D004792 1.1e-52 211.5 266 50.8
Peaxi162Scf00214g01114 Petunia axillaris HOM05D004223 ORTHO05D004792 1.1e-52 211.5 310 47.4
BcaB02g07485 Brassica carinata HOM05D004223 ORTHO05D004792 2.5e-52 210.3 392 37.0
SMO296G0001 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 1.6e-51 207.6 299 43.8
CDE09G0669 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 3.9e-50 203.0 261 49.4
Sabra02G0047600 Salix brachista HOM05D004223 ORTHO05D004792 5.1e-50 202.6 310 44.2
FAN02G1578 Fragaria x ananassa HOM05D004223 ORTHO05D004792 6.7e-50 202.2 355 39.7
Hund21517 Selenicereus undatus HOM05D004223 ORTHO05D004792 1.9e-49 200.7 347 40.9
SalBow7G0638 Salvia bowleyana HOM05D004223 ORTHO05D004792 3.7e-48 196.4 200 53.5
COL.COLO4_07169 Corchorus olitorius HOM05D000230 ORTHO05D000176 1.1e-47 194.9 282 43.6
Atru.chr10.1338 Acer truncatum HOM05D004223 ORTHO05D004792 7.7e-46 188.7 135 69.6
FAN16G0695 Fragaria x ananassa HOM05D004223 ORTHO05D004792 3.8e-45 186.4 364 38.2
COL.COLO4_06072 Corchorus olitorius HOM05D004223 ORTHO05D004792 8.5e-45 185.3 181 58.6
FAN21G3874 Fragaria x ananassa HOM05D004223 ORTHO05D004792 3.3e-41 173.3 170 57.6
Actinidia22922 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.5e-38 164.5 139 65.5
Atru.chr10.1339 Acer truncatum HOM05D004223 ORTHO05D004792 3.8e-37 159.8 160 56.9
Eucgr.A02011 Eucalyptus grandis HOM05D004223 ORTHO05D004792 1.1e-36 158.3 265 41.9
Ca_18272_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 9.4e-36 155.2 185 49.2
vmacro10944 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 2.3e-34 150.6 414 33.3
Duzib138G1261 Durio zibethinus HOM05D004223 ORTHO05D004792 3.0e-34 150.2 352 35.8
MSTRG.16215 Avicennia marina HOM05D004223 ORTHO05D004792 5.2e-34 149.4 138 62.3
unitig_37.g12104 Utricularia gibba HOM05D004223 ORTHO05D004792 1.1e-31 141.7 177 48.0
FAN14G4329 Fragaria x ananassa HOM05D004223 ORTHO05D004792 2.4e-31 140.6 360 33.3
Oeu040112.1 Olea europaea HOM05D004223 ORTHO05D004792 7.0e-31 139.0 102 64.7
Oeu040113.1 Olea europaea HOM05D004223 ORTHO05D004792 1.6e-27 127.9 164 51.2
unitig_37.g12105 Utricularia gibba HOM05D004223 ORTHO05D004792 9.7e-25 118.6 147 48.3
Actinidia22925 Actinidia chinensis HOM05D004223 ORTHO05D004792 2.8e-24 117.1 77 75.3
Haze_05551 Corylus avellana HOM05D004223 ORTHO05D004792 4.8e-24 116.3 126 54.0
MBI10_g27412_MAGBIO Magnolia biondii HOM05D004223 ORTHO05D004792 2.0e-22 110.9 183 41.5
CSS0012222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 2.7e-22 110.5 97 67.0
SMO174G0155 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 1.3e-21 108.2 214 37.4
CDE02G0113 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 6.5e-21 105.9 117 50.4
FAN05G0022 Fragaria x ananassa HOM05D004223 ORTHO05D004792 6.5e-21 105.9 311 33.4
CSS0013327 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 7.5e-17 92.4 102 58.8
TPR.G14049 Trifolium pratense HOM05D004223 ORTHO05D004792 2.8e-16 90.5 110 45.5
Haze_13521 Corylus avellana HOM05D004223 ORTHO05D004792 1.8e-15 87.8 105 45.7
Dinv05252 Davidia involucrata HOM05D004223 ORTHO05D004792 1.7e-13 81.3 73 63.0
QL05p059167 Quercus lobata HOM05D004223 ORTHO05D004792 9.5e-12 75.5 93 46.2
Sed0009700 Sechium edule HOM05D004223 ORTHO05D372866 1.8e-10 71.2 87 54.0
vmacro10943 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 1.5e-09 68.2 45 71.1
PGSC0003DMG400012960 Solanum tuberosum HOM05D004223 ORTHO05D004792 7.5e-09 65.9 86 51.2
Dinv05253 Davidia involucrata HOM05D004223 ORTHO05D004792 2.8e-08 63.9 86 50.0
Pp3c2_8490 Physcomitrium patens HOM05D001248 ORTHO05D001183 1.2e-06 58.5 299 27.8
CSS0014222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 4.5e-06 56.6 48 68.8
Pp3c1_42710 Physcomitrium patens HOM05D001248 ORTHO05D001183 5.9e-06 56.2 299 27.8


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