Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 1.3e-81 306.2 144 100.0
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 1.5e-69 266.2 144 84.7
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 4.5e-66 254.6 144 83.3
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 2.9e-65 251.9 145 82.8
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 4.7e-63 244.6 144 79.9
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 5.8e-37 157.9 147 55.1
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 7.8e-34 147.5 146 51.4
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 1.9e-32 142.9 146 50.7
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 1.9e-32 142.9 146 49.3
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 2.5e-32 142.5 144 51.4
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 9.5e-32 140.6 146 49.3
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 2.8e-31 139.0 145 49.7
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 3.6e-31 138.7 145 49.0
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 8.1e-31 137.5 147 51.7
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 2.4e-30 136.0 146 49.3
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 4.0e-30 135.2 145 48.3
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 4.0e-30 135.2 146 49.3
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 1.2e-29 133.7 145 49.7
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 2.6e-29 132.5 144 47.9
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 2.6e-29 132.5 144 47.9
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 1.7e-28 129.8 144 47.2
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 2.9e-28 129.0 144 45.1
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 2.9e-28 129.0 144 47.2
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 4.9e-28 128.3 144 45.1
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 8.4e-28 127.5 144 47.2
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 8.4e-28 127.5 148 49.3
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 1.9e-27 126.3 144 47.9
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 1.9e-27 126.3 144 44.4
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 2.4e-27 125.9 145 48.3
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 4.1e-27 125.2 144 46.5
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 7.1e-27 124.4 148 48.6
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 1.6e-26 123.2 145 46.2
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 2.1e-26 122.9 148 48.0
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 6.0e-26 121.3 146 47.3
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 1.7e-25 119.8 146 47.9
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 3.9e-25 118.6 146 46.6
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 5.1e-25 118.2 140 45.7
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 6.6e-25 117.9 130 48.5
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 1.1e-24 117.1 144 43.1
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 2.5e-24 115.9 146 45.9
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 7.3e-24 114.4 144 44.4
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 1.2e-23 113.6 144 41.7
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 2.8e-23 112.5 144 45.8
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 4.7e-23 111.7 145 42.8
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 6.2e-23 111.3 145 43.4
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 8.1e-23 110.9 135 45.9
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 3.1e-22 109.0 146 41.8
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 6.9e-22 107.8 146 41.1
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 6.9e-22 107.8 145 44.8
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 6.9e-22 107.8 141 42.6
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 9.0e-22 107.5 128 40.6
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 9.0e-22 107.5 147 38.8
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 1.2e-21 107.1 130 48.5
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 1.5e-21 106.7 130 48.5
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 1.5e-21 106.7 145 41.4
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 2.0e-21 106.3 135 46.7
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 2.0e-21 106.3 135 46.7
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 2.0e-21 106.3 116 47.4
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 5.8e-21 104.8 144 42.4
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 1.3e-20 103.6 130 43.1
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.3e-20 103.6 144 41.7
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 1.3e-20 103.6 151 41.7
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 2.2e-20 102.8 144 43.1
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 6.4e-20 101.3 122 45.1
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 8.4e-20 100.9 124 46.0
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 8.4e-20 100.9 145 40.0
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 1.1e-19 100.5 130 43.1
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 2.7e-18 95.9 108 42.6
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 6.0e-18 94.7 109 45.0
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 7.8e-18 94.4 109 44.0
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 5.1e-17 91.7 112 44.6
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 3.6e-15 85.5 109 46.8
Os02g0210900 Oryza sativa ssp. japonica HOM05D007964 ORTHO05D010090 1.7e-12 76.6 141 39.0
ATR1120G014 Amborella trichopoda HOM05D007964 ORTHO05D010090 1.1e-08 63.9 134 29.1
CSS0037942 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.1e-08 63.9 50 52.0
SGA_v2.0_scaffold59G20630 Striga asiatica HOM05D002803 ORTHO05D003089 1.1e-08 63.9 110 33.6
Zm00001eb205370 Zea mays HOM05D007964 ORTHO05D010090 1.1e-08 63.9 39 69.2
HPP92_000633 Vanilla planifolia HOM05D007964 ORTHO05D010090 2.5e-08 62.8 129 31.0
SGA_v2.0_scaffold16G07882 Striga asiatica HOM05D002803 ORTHO05D003089 3.3e-08 62.4 140 30.0
MSTRG.813 Avicennia marina HOM05D002803 ORTHO05D003089 4.3e-08 62.0 147 25.2
Nitab4.5_0000221g0090 Nicotiana tabacum HOM05D002803 ORTHO05D003089 7.4e-08 61.2 139 30.2
Nitab4.5_0007199g0010 Nicotiana tabacum HOM05D002803 ORTHO05D003089 9.6e-08 60.8 107 33.6
ECA234G0469 Erigeron canadensis HOM05D002803 ORTHO05D003089 2.1e-07 59.7 84 34.5
PGSC0003DMG400007474 Solanum tuberosum HOM05D002803 ORTHO05D003089 2.1e-07 59.7 115 30.4
C08p04510 Brassica napus HOM05D002803 ORTHO05D003089 2.8e-07 59.3 106 31.1
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 3.7e-07 58.9 43 58.1
TAR374G0994 Trochodendron aralioides HOM05D002803 ORTHO05D003089 3.7e-07 58.9 106 30.2
BcaC07g37087 Brassica carinata HOM05D002803 ORTHO05D003089 6.2e-07 58.2 106 31.1
A08p04240 Brassica napus HOM05D002803 ORTHO05D003089 6.2e-07 58.2 106 31.1
BolC8t47256H Brassica oleracea HOM05D002803 ORTHO05D003089 6.2e-07 58.2 106 31.1
Sc04g0006760 Simmondsia chinensis HOM05D002803 ORTHO05D003089 1.8e-06 56.6 72 41.7
Actinidia39806 Actinidia chinensis HOM05D002803 ORTHO05D003089 2.4e-06 56.2 49 44.9
BraA08t32452Z Brassica rapa HOM05D002803 ORTHO05D003089 2.4e-06 56.2 106 30.2
HanXRQChr16g0528841 Helianthus annuus HOM05D002803 ORTHO05D003089 2.4e-06 56.2 147 28.6
SMO367G0928 Selaginella moellendorffii HOM05D002803 ORTHO05D003089 2.4e-06 56.2 50 50.0
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 3.1e-06 55.8 47 51.1
Dinv05804 Davidia involucrata HOM05D002803 ORTHO05D003089 4.0e-06 55.5 120 33.3
Migut.E00292 Erythranthe guttata HOM05D002803 ORTHO05D003089 5.3e-06 55.1 111 33.3
Lj3P1020T26 Lonicera japonica HOM05D002803 ORTHO05D003089 5.3e-06 55.1 64 40.6
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 6.9e-06 54.7 92 33.7
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 9.0e-06 54.3 37 59.5
MSTRG.2266 Avicennia marina HOM05D002803 ORTHO05D003089 9.0e-06 54.3 48 54.2
Haze_17431 Corylus avellana HOM05D002803 ORTHO05D003089 9.0e-06 54.3 67 41.8
Peaxi162Scf00367g00712 Petunia axillaris HOM05D002803 ORTHO05D003089 9.0e-06 54.3 44 52.3
Sopen04g002030 Solanum pennellii HOM05D002803 ORTHO05D003089 9.0e-06 54.3 89 30.3


User provided reference genes

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