Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 7.3e-116 420.6 220 100.0
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 2.1e-78 296.2 237 72.6
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.8e-77 293.1 240 71.2
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 1.7e-72 276.6 246 66.7
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 2.3e-69 266.2 227 65.6
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 2.1e-54 216.5 239 53.6
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 1.7e-51 206.8 238 52.1
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 3.7e-51 205.7 241 49.4
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 6.3e-51 204.9 241 51.0
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 1.2e-49 200.7 215 51.6
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.2e-49 200.7 230 52.2
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 2.0e-49 199.9 247 49.4
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 1.0e-48 197.6 237 51.5
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 1.7e-48 196.8 228 50.9
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 6.5e-48 194.9 229 50.7
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 8.5e-48 194.5 212 52.8
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 3.2e-47 192.6 252 49.2
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 3.2e-47 192.6 211 49.8
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 9.4e-47 191.0 242 48.8
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 9.4e-47 191.0 243 49.8
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.2e-46 190.7 215 50.2
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 1.6e-46 190.3 238 49.2
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.6e-46 190.3 224 53.6
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 2.1e-46 189.9 212 51.4
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 3.6e-46 189.1 173 60.1
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 4.7e-46 188.7 213 54.5
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 4.7e-46 188.7 239 49.4
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 8.0e-46 188.0 242 48.3
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 8.0e-46 188.0 230 50.0
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 2.3e-45 186.4 238 51.3
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.3e-45 186.4 253 48.2
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 2.3e-45 186.4 236 50.0
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 5.2e-45 185.3 236 49.2
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 6.7e-45 184.9 241 46.1
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 8.8e-45 184.5 239 48.5
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 8.8e-45 184.5 209 51.7
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 8.8e-45 184.5 207 53.1
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 8.8e-45 184.5 233 51.1
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.0e-44 183.3 242 47.9
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 3.3e-44 182.6 235 50.2
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 4.4e-44 182.2 235 50.6
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 5.7e-44 181.8 216 50.0
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 2.2e-43 179.9 232 47.8
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 4.8e-43 178.7 243 48.6
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 4.8e-43 178.7 203 54.2
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 8.2e-43 177.9 238 49.2
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.1e-42 177.6 238 48.7
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.4e-42 177.2 231 48.1
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.4e-42 176.4 238 48.7
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 2.4e-42 176.4 238 48.7
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 2.4e-42 176.4 245 48.6
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 2.4e-42 176.4 219 45.2
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 4.1e-42 175.6 238 48.3
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 5.3e-42 175.3 193 52.3
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 7.0e-42 174.9 219 43.8
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 7.0e-42 174.9 232 47.8
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 9.1e-42 174.5 218 49.5
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 1.6e-41 173.7 219 48.9
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 2.0e-41 173.3 231 48.1
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 2.0e-41 173.3 240 47.1
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 2.7e-41 172.9 233 48.9
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 3.5e-41 172.6 237 45.6
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 4.5e-41 172.2 245 47.3
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 4.5e-41 172.2 198 49.5
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 7.7e-41 171.4 239 46.9
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 7.7e-41 171.4 227 48.5
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.0e-40 171.0 235 47.2
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.3e-40 170.6 247 45.7
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 1.7e-40 170.2 226 48.2
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.2e-40 169.9 209 44.5
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 2.9e-40 169.5 173 51.4
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 6.5e-40 168.3 220 51.4
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 8.5e-40 167.9 206 49.0
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.2e-39 166.0 233 47.2
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 7.2e-39 164.9 215 45.1
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 1.2e-38 164.1 240 47.5
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 2.7e-38 162.9 240 43.8
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 8.0e-38 161.4 213 44.6
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 1.0e-37 161.0 215 47.4
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 1.4e-37 160.6 240 44.6
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.4e-37 160.6 193 51.8
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 2.3e-37 159.8 206 51.0
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 5.2e-37 158.7 244 44.3
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 5.2e-37 158.7 188 50.5
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 1.5e-36 157.1 239 45.2
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 2.0e-36 156.8 232 44.0
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 2.0e-36 156.8 212 44.3
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 2.6e-36 156.4 209 47.4
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.4e-36 156.0 231 42.9
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 9.8e-36 154.5 244 44.7
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 1.7e-35 153.7 278 40.3
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.8e-35 152.9 241 41.9
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 1.1e-34 151.0 218 46.3
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 2.4e-34 149.8 235 41.7
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 4.1e-34 149.1 267 39.7
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 4.1e-34 149.1 173 48.6
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.2e-33 147.5 125 58.4
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 1.6e-33 147.1 236 44.1
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 4.5e-33 145.6 244 45.5
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 1.3e-32 144.1 239 43.1
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 1.3e-32 144.1 239 43.1
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 1.3e-32 144.1 239 43.1
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 8.5e-32 141.4 236 42.8
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 2.5e-31 139.8 237 39.2
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 2.5e-31 139.8 237 39.2
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 2.8e-30 136.3 199 43.7
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 3.6e-30 136.0 280 38.2
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 3.0e-29 132.9 218 39.4
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 8.8e-29 131.3 190 43.7
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.5e-28 130.6 173 48.0
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 2.2e-27 126.7 232 39.7
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.8e-27 126.3 240 37.9
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 3.1e-26 122.9 183 45.9
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 9.2e-26 121.3 174 46.0
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 1.2e-25 120.9 174 46.0
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 3.5e-25 119.4 168 45.8
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 3.5e-25 119.4 175 45.7
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 3.5e-25 119.4 175 45.7
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 1.9e-23 113.6 199 42.7
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 4.7e-22 109.0 194 42.3
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 2.0e-20 103.6 197 38.6
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 3.7e-19 99.4 235 34.9
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 1.9e-15 87.0 234 34.2
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 1.6e-14 84.0 149 40.9
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 7.8e-09 65.1 146 38.4
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 4.3e-07 59.3 94 43.6
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 5.6e-07 58.9 47 66.0
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 9.5e-07 58.2 193 28.0


User provided reference genes

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