Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 0.0e+00 1587.0 869 100.0
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 2.0e-265 919.5 821 64.6
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 2.2e-256 889.4 789 66.5
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 5.4e-247 858.2 790 62.7
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 7.6e-241 837.8 791 61.7
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 4.8e-78 297.0 940 29.7
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 3.7e-70 270.8 802 31.5
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 3.1e-69 267.7 842 30.2
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 1.6e-68 265.4 830 31.1
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 5.9e-68 263.5 861 30.3
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 1.3e-67 262.3 884 28.3
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 4.4e-63 247.3 893 29.1
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 9.7e-63 246.1 843 29.3
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 2.7e-60 238.0 841 29.5
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.0e-59 236.1 841 29.4
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 3.8e-59 234.2 895 27.3
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 9.4e-58 229.6 839 30.5
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.7e-57 228.0 835 30.5
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 6.1e-57 226.9 824 30.1
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 4.0e-56 224.2 825 28.7
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.5e-55 222.2 849 28.4
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 2.0e-55 221.9 766 29.6
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 4.4e-55 220.7 819 29.9
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 4.4e-55 220.7 844 28.3
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 3.7e-54 217.6 820 29.9
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 8.3e-54 216.5 841 27.5
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 7.0e-53 213.4 817 29.4
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 3.8e-51 207.6 818 29.8
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 1.9e-50 205.3 843 28.7
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 2.3e-48 198.4 1052 24.5
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 5.2e-48 197.2 847 27.0
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 3.4e-47 194.5 829 27.9
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 1.7e-46 192.2 854 27.0
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 1.8e-45 188.7 878 26.5
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 1.8e-45 188.7 850 26.5
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 3.1e-45 188.0 790 27.2
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 5.9e-44 183.7 811 26.5
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 5.9e-44 183.7 1000 26.2
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 3.8e-43 181.0 815 28.0
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 6.6e-43 180.3 838 25.3
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 8.6e-43 179.9 972 25.7
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 1.1e-42 179.5 852 26.8
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 4.3e-42 177.6 833 27.4
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 9.5e-42 176.4 842 27.0
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 2.8e-41 174.9 880 26.5
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 2.8e-41 174.9 851 29.6
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 4.0e-40 171.0 831 26.4
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 5.2e-40 170.6 815 26.6
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 6.8e-40 170.2 911 25.8
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 1.5e-39 169.1 843 26.2
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 5.7e-39 167.2 837 26.8
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 2.2e-38 165.2 828 26.7
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 2.9e-38 164.9 821 26.1
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 2.9e-38 164.9 258 43.8
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 1.4e-37 162.5 803 25.8
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.8e-37 162.2 974 24.8
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 1.8e-37 162.2 914 26.7
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 9.2e-37 159.8 264 42.4
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 1.0e-35 156.4 824 25.4
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 5.0e-35 154.1 277 42.2
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 6.6e-35 153.7 909 31.1
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 8.6e-35 153.3 842 25.7
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 3.3e-34 151.4 301 35.5
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 5.6e-34 150.6 861 25.2
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 7.3e-34 150.2 296 36.5
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 1.2e-33 149.4 256 37.5
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 1.6e-33 149.1 836 26.6
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.6e-33 149.1 239 40.2
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 2.1e-33 148.7 869 25.8
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 2.3e-32 145.2 248 39.9
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 5.2e-32 144.1 238 40.3
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 8.9e-32 143.3 991 23.5
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 1.5e-31 142.5 857 24.6
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 1.5e-31 142.5 857 24.6
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 2.0e-31 142.1 810 25.7
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 2.6e-31 141.7 859 24.3
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 3.4e-31 141.4 860 24.5
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 3.4e-31 141.4 860 24.5
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 1.3e-30 139.4 291 38.5
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 1.3e-30 139.4 301 34.9
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 1.7e-30 139.0 255 37.3
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 2.2e-30 138.7 218 42.2
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 2.2e-30 138.7 298 36.6
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 2.2e-30 138.7 827 25.4
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 2.9e-30 138.3 138 52.2
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 8.3e-30 136.7 304 35.9
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.4e-29 136.0 764 23.7
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.9e-29 135.6 141 50.4
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 2.4e-29 135.2 251 37.5
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 2.4e-29 135.2 380 30.0
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 7.0e-29 133.7 318 34.3
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 7.0e-29 133.7 172 47.1
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 2.7e-28 131.7 895 23.9
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 4.6e-28 131.0 213 42.7
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 1.7e-27 129.0 733 25.4
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 6.6e-27 127.1 257 35.8
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 8.6e-27 126.7 371 29.1
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.1e-26 126.3 215 42.3
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 2.8e-25 121.7 881 26.0
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.0e-23 115.5 225 34.7
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 5.8e-23 114.0 275 34.9
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 1.3e-22 112.8 284 33.1
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 9.2e-21 106.7 303 30.0
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 3.5e-20 104.8 182 37.4
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 4.6e-20 104.4 262 34.0
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 6.0e-20 104.0 242 32.2
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 7.8e-20 103.6 279 31.5
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 1.7e-19 102.4 269 32.3
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 2.3e-19 102.1 136 40.4
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 6.6e-19 100.5 100 52.0
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 3.3e-18 98.2 238 33.2
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.2e-17 96.3 220 35.0
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 4.7e-17 94.4 121 46.3
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 6.2e-17 94.0 944 22.9
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.2e-14 85.5 217 32.7
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.9e-13 82.4 219 31.1
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.2e-07 63.2 145 29.7
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 1.5e-07 62.8 66 50.0
Lalb_Chr19g0125061 Lupinus albus HOM05D005945 ORTHO05D006749 3.8e-06 58.2 234 28.2


User provided reference genes

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