Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009722 Sechium edule HOM05D008150 ORTHO05D010312 8.3e-229 796.6 375 100.0
Sed0002625 Sechium edule HOM05D008150 ORTHO05D010312 3.6e-62 243.0 304 46.7
Sed0009586 Sechium edule HOM05D008150 ORTHO05D010312 1.4e-55 221.1 331 43.5
ClCG03G016610 Citrullus lanatus HOM05D008150 ORTHO05D010312 4.5e-49 199.5 398 37.4
ClCG01G022200 Citrullus lanatus HOM05D008150 ORTHO05D010312 7.2e-47 192.2 393 35.9
CsaV3_1G039380 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.7e-43 179.9 394 34.3
CsaV3_6G049300 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.6e-41 173.7 396 34.1
Sed0002875 Sechium edule HOM05D008150 ORTHO05D010312 7.7e-41 172.2 408 33.6
MELO3C015364.2 Cucumis melo HOM05D008150 ORTHO05D010312 1.3e-40 171.4 395 34.9
MELO3C007368.2 Cucumis melo HOM05D008150 ORTHO05D010312 3.8e-40 169.9 396 34.6
Sed0015391 Sechium edule HOM05D008150 ORTHO05D010312 2.1e-38 164.1 381 32.5
Sed0011109 Sechium edule HOM05D008150 ORTHO05D010312 3.7e-35 153.3 406 33.7
Sed0025201 Sechium edule HOM05D008150 ORTHO05D010312 6.3e-35 152.5 299 36.1
ClCG10G014280 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.4e-34 151.4 306 35.9
CsaV3_3G042340 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.4e-34 150.6 401 30.4
Sed0000604 Sechium edule HOM05D008150 ORTHO05D010312 2.0e-33 147.5 400 34.5
Sed0013863 Sechium edule HOM05D008150 ORTHO05D010312 3.5e-33 146.7 404 29.5
CsaV3_3G042360 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.2e-32 144.1 330 34.5
ClCG01G025230 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.1e-31 141.7 351 33.9
Sed0007116 Sechium edule HOM05D008150 ORTHO05D010312 1.9e-31 141.0 392 31.6
Sed0019166 Sechium edule HOM05D008150 ORTHO05D010312 2.1e-30 137.5 371 31.5
MELO3C002009.2 Cucumis melo HOM05D008150 ORTHO05D010312 1.2e-28 131.7 345 30.4
Sed0001873 Sechium edule HOM05D008150 ORTHO05D010312 1.2e-28 131.7 385 32.5
Sed0020127 Sechium edule HOM05D008150 ORTHO05D010312 4.9e-27 126.3 390 28.2
Sed0017849 Sechium edule HOM05D008150 ORTHO05D010312 2.4e-26 124.0 363 30.9
Sed0020268 Sechium edule HOM05D008150 ORTHO05D010312 1.6e-25 121.3 384 28.4
Sed0015534 Sechium edule HOM05D008150 ORTHO05D010312 8.6e-24 115.5 368 28.0
MELO3C033559.2 Cucumis melo HOM05D008150 ORTHO05D010312 1.5e-23 114.8 407 27.5
CsaV3_6G008010 Cucumis sativus L. HOM05D008150 ORTHO05D010312 7.2e-23 112.5 368 29.3
Sed0019399 Sechium edule HOM05D008150 ORTHO05D010312 7.2e-23 112.5 304 30.3
Sed0023044 Sechium edule HOM05D008150 ORTHO05D010312 9.5e-23 112.1 376 28.5
ClCG11G005140 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.6e-22 110.2 395 28.9
Sed0015862 Sechium edule HOM05D008150 ORTHO05D010312 3.6e-22 110.2 394 28.7
Sed0000179 Sechium edule HOM05D008150 ORTHO05D010312 6.8e-21 105.9 303 29.7
Sed0027992 Sechium edule HOM05D008150 ORTHO05D010312 2.6e-20 104.0 343 28.3
CsaV3_1G024350 Cucumis sativus L. HOM05D008150 ORTHO05D010312 7.5e-20 102.4 394 28.2
MELO3C022333.2 Cucumis melo HOM05D002645 ORTHO05D002741 2.2e-19 100.9 306 27.8
CsaV3_1G028910 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.2e-19 100.9 394 28.2
CsaV3_1G002720 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.7e-19 100.1 294 29.6
CsaV3_6G007970 Cucumis sativus L. HOM05D008150 ORTHO05D010312 9.2e-18 95.5 329 28.9
Sed0016315 Sechium edule HOM05D008150 ORTHO05D010312 9.2e-18 95.5 333 27.3
ClCG06G016080 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.0e-16 92.0 368 28.3
Sed0020143 Sechium edule HOM05D008150 ORTHO05D010312 6.6e-16 89.4 300 29.0
CsaV3_5G038910 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.1e-15 88.6 266 29.7
Sed0008558 Sechium edule HOM05D008150 ORTHO05D010312 2.5e-15 87.4 198 34.3
Cfa006260 Carpinus fangiana HOM05D000007 ORTHO05D000521 1.6e-14 84.7 297 29.6
CsaV3_5G038900 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.1e-14 84.3 240 25.0
CiPaw.07G080600 Carya illinoinensis HOM05D000007 ORTHO05D000521 3.6e-14 83.6 385 25.2
Haze_04558 Corylus avellana HOM05D000007 ORTHO05D000521 6.2e-14 82.8 298 28.9
CsaV3_1G005780 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.4e-13 81.6 324 26.9
CsaV3_1G003460 Cucumis sativus L. HOM05D008150 ORTHO05D010312 6.8e-13 79.3 360 26.4
CsaV3_1G029060 Cucumis sativus L. HOM05D003072 ORTHO05D008464 5.8e-12 76.3 268 28.0
Cfa014273 Carpinus fangiana HOM05D000007 ORTHO05D000521 2.2e-11 74.3 345 27.5
CsaV3_1G024330 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.9e-11 73.9 261 27.2
CsaV3_1G003470 Cucumis sativus L. HOM05D008150 ORTHO05D010312 4.9e-11 73.2 330 27.3
CsaV3_5G039080 Cucumis sativus L. HOM05D008150 ORTHO05D010312 4.9e-11 73.2 161 31.1
Potri.001G129400 Populus trichocarpa HOM05D000007 ORTHO05D000521 6.4e-11 72.8 345 24.9
CSS0022094 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 8.3e-11 72.4 366 23.2
Prupe.3G110600 Prunus persica HOM05D000007 ORTHO05D000039 8.3e-11 72.4 267 27.0
Psat2g140960 Pisum sativum HOM05D000007 ORTHO05D000521 3.2e-10 70.5 357 26.9
PSO832G1314 Papaver somniferum HOM05D000007 ORTHO05D000676 4.1e-10 70.1 344 23.3
Cfa003137 Carpinus fangiana HOM05D000007 ORTHO05D000017 7.0e-10 69.3 313 25.9
PSO339G4553 Papaver somniferum HOM05D000007 ORTHO05D000017 1.2e-09 68.6 364 25.3
PSO339G0634 Papaver somniferum HOM05D000007 ORTHO05D000676 2.7e-09 67.4 291 26.8
Sabra01G0099700 Salix brachista HOM05D000007 ORTHO05D000521 2.7e-09 67.4 317 25.9
Aqoxy1G04047 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 1.0e-08 65.5 350 24.6
PSO170G5178 Papaver somniferum HOM05D000007 ORTHO05D000017 1.3e-08 65.1 203 26.1
Medtr3g009240 Medicago truncatula HOM05D000007 ORTHO05D000017 1.7e-08 64.7 368 25.8
Haze_25865 Corylus avellana HOM05D000007 ORTHO05D000017 2.3e-08 64.3 332 25.6
PSO017G5473 Papaver somniferum HOM05D000007 ORTHO05D000676 2.3e-08 64.3 378 23.8
PSO135G0554 Papaver somniferum HOM05D000007 ORTHO05D000017 2.3e-08 64.3 337 22.8
PSO478G2862 Papaver somniferum HOM05D000007 ORTHO05D000017 2.3e-08 64.3 262 25.2
PSO210G6981 Papaver somniferum HOM05D000007 ORTHO05D000676 3.0e-08 63.9 282 22.7
CSS0009515 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 3.9e-08 63.5 377 24.7
HanXRQChr05g0144961 Helianthus annuus HOM05D000007 ORTHO05D012101 3.9e-08 63.5 347 25.1
Lsat_1_v5_gn_7_77020 Lactuca sativa HOM05D000007 ORTHO05D000039 3.9e-08 63.5 305 25.6
Potri.017G058900 Populus trichocarpa HOM05D000007 ORTHO05D000017 3.9e-08 63.5 152 32.2
FAN11G2499 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.0e-08 63.2 263 26.2
PSO017G2563 Papaver somniferum HOM05D000007 ORTHO05D000017 5.0e-08 63.2 232 27.2
MELO3C035226.2 Cucumis melo HOM05D008150 ORTHO05D010312 6.6e-08 62.8 175 30.3
DCAR_019704 Daucus carota HOM05D000007 ORTHO05D000521 6.6e-08 62.8 368 25.8
FAN28G0255 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.6e-08 62.8 246 27.2
PSO832G3529 Papaver somniferum HOM05D000007 ORTHO05D000676 6.6e-08 62.8 397 22.7
DCAR_019703 Daucus carota HOM05D000007 ORTHO05D000521 8.6e-08 62.4 373 24.9
Lj1P669T8 Lonicera japonica HOM05D000007 ORTHO05D000039 8.6e-08 62.4 342 22.2
FvH4_1g03000 Fragaria vesca HOM05D000007 ORTHO05D000017 1.1e-07 62.0 246 26.8
Manes.07G066970 Manihot esculenta HOM05D000007 ORTHO05D000017 1.1e-07 62.0 230 24.8
Aqoxy3G03971 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 1.5e-07 61.6 268 25.4
Hma1.2p1_1251F.1_g270320 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 1.5e-07 61.6 229 27.5
Actinidia35052 Actinidia chinensis HOM05D000007 ORTHO05D000676 1.9e-07 61.2 302 24.8
Aqoxy6G01544 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 1.9e-07 61.2 341 23.8
Lj1P667T11 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-07 61.2 341 22.6
Dinv18842 Davidia involucrata HOM05D000271 ORTHO05D000742 2.5e-07 60.8 352 26.1
Dinv38361 Davidia involucrata HOM05D000007 ORTHO05D000017 2.5e-07 60.8 332 20.5
Manes.07G065200 Manihot esculenta HOM05D000007 ORTHO05D000017 2.5e-07 60.8 227 24.7
Nn8g40107 Nelumbo nucifera HOM05D000007 ORTHO05D000017 3.3e-07 60.5 257 23.3
Hma1.2p1_1251F.1_g270330 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 4.3e-07 60.1 222 27.5
Potri.004G000900 Populus trichocarpa HOM05D000007 ORTHO05D000521 4.3e-07 60.1 311 23.2
ClCG01G016520 Citrullus lanatus HOM05D008150 ORTHO05D010312 7.3e-07 59.3 142 33.1
Lj1P672T29 Lonicera japonica HOM05D000007 ORTHO05D000039 7.3e-07 59.3 341 22.6
vmacro16481 Vaccinium macrocarpon HOM05D000007 ORTHO05D000676 7.3e-07 59.3 254 23.2
Lj2P385T13 Lonicera japonica HOM05D000664 ORTHO05D000491 9.5e-07 58.9 235 25.5
Lj8C594T5 Lonicera japonica HOM05D000007 ORTHO05D000521 9.5e-07 58.9 338 23.7
Lj4g0013904 Lotus japonicus HOM05D000664 ORTHO05D000491 9.5e-07 58.9 270 23.7
PSO384G0388 Papaver somniferum HOM05D000007 ORTHO05D000676 9.5e-07 58.9 300 24.3
PSO566G0304 Papaver somniferum HOM05D000007 ORTHO05D000017 1.2e-06 58.5 250 25.6
PSO832G1527 Papaver somniferum HOM05D000007 ORTHO05D000676 1.2e-06 58.5 211 26.1
Rhsim12G0150000 Rhododendron simsii HOM05D000007 ORTHO05D000676 1.2e-06 58.5 241 23.7
Dinv12543 Davidia involucrata HOM05D000007 ORTHO05D000521 1.6e-06 58.2 368 22.0
ClCG05G019640 Citrullus lanatus HOM05D008150 ORTHO05D010312 2.1e-06 57.8 101 29.7
Lj8P594T13 Lonicera japonica HOM05D000007 ORTHO05D000521 2.1e-06 57.8 316 24.1
PSO591G0497 Papaver somniferum HOM05D000007 ORTHO05D000017 2.1e-06 57.8 358 22.9
PSO832G1043 Papaver somniferum HOM05D000007 ORTHO05D000017 2.1e-06 57.8 328 22.6
Potri.001G318400 Populus trichocarpa HOM05D000007 ORTHO05D000017 2.1e-06 57.8 260 23.1
CsaV3_6G008490 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.8e-06 57.4 210 28.1
Dinv17447 Davidia involucrata HOM05D000007 ORTHO05D000676 2.8e-06 57.4 204 27.5
RcHm_v2.0_Chr1g0372381 Rosa chinensis HOM05D000007 ORTHO05D000017 2.8e-06 57.4 354 22.9
COL.COLO4_14582 Corchorus olitorius HOM05D000007 ORTHO05D000017 3.6e-06 57.0 345 26.4
Dinv34353 Davidia involucrata HOM05D000007 ORTHO05D000521 3.6e-06 57.0 222 27.9
Medtr2g055970 Medicago truncatula HOM05D000007 ORTHO05D000017 3.6e-06 57.0 300 23.0
arahy.Tifrunner.gnm1.ann1.SE5UPX Arachis hypogaea HOM05D000007 ORTHO05D000017 4.7e-06 56.6 353 24.6
COL.COLO4_37368 Corchorus olitorius HOM05D000664 ORTHO05D000491 4.7e-06 56.6 304 26.6
Manes.07G065285 Manihot esculenta HOM05D000007 ORTHO05D000017 6.2e-06 56.2 175 25.1
PSO017G3000 Papaver somniferum HOM05D000007 ORTHO05D000676 6.2e-06 56.2 203 26.6
PSO384G1360 Papaver somniferum HOM05D000007 ORTHO05D000017 6.2e-06 56.2 268 23.9
PSO384G2323 Papaver somniferum HOM05D000007 ORTHO05D000017 6.2e-06 56.2 268 23.9
PSO455G0040 Papaver somniferum HOM05D000007 ORTHO05D000017 6.2e-06 56.2 356 21.9
PSO591G0002 Papaver somniferum HOM05D000007 ORTHO05D000676 6.2e-06 56.2 247 25.5
Prupe.3G191200 Prunus persica HOM05D000007 ORTHO05D000017 6.2e-06 56.2 256 25.8
TAR624G0469 Trochodendron aralioides HOM05D000007 ORTHO05D000521 6.2e-06 56.2 338 24.3
Lj3C809T2 Lonicera japonica HOM05D000007 ORTHO05D000017 8.1e-06 55.8 221 27.1
PSO170G5117 Papaver somniferum HOM05D000007 ORTHO05D000676 8.1e-06 55.8 153 26.8
Thecc.06G234200 Theobroma cacao HOM05D000007 ORTHO05D000017 8.1e-06 55.8 317 24.0


User provided reference genes

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