Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 3.9e-136 488.4 298 100.0
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 1.7e-112 409.8 306 82.4
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 1.6e-110 403.3 306 78.8
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 2.0e-108 396.4 306 80.4
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 5.8e-92 341.7 290 67.6
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 7.6e-92 341.3 293 66.9
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 4.9e-91 338.6 307 70.7
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 6.5e-91 338.2 303 62.7
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 1.9e-90 336.7 303 73.9
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 2.5e-90 336.3 259 71.0
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 5.5e-90 335.1 293 65.2
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 9.3e-90 334.3 298 68.5
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 1.2e-89 334.0 261 72.4
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.2e-89 334.0 261 72.4
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.2e-89 334.0 295 64.1
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 2.7e-89 332.8 298 65.4
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 2.7e-89 332.8 304 65.1
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 4.6e-89 332.0 295 63.7
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 4.6e-89 332.0 294 64.6
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.3e-88 330.5 301 67.4
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 2.3e-88 329.7 293 65.5
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 5.1e-88 328.6 293 63.8
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 1.1e-87 327.4 299 64.9
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 1.9e-87 326.6 296 63.5
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 1.9e-87 326.6 261 70.5
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 1.9e-87 326.6 268 68.7
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.5e-87 326.2 259 68.3
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.5e-87 326.2 295 63.4
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 5.7e-87 325.1 297 66.3
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 5.7e-87 325.1 261 70.1
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 7.4e-87 324.7 294 62.6
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 2.1e-86 323.2 295 61.7
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 2.8e-86 322.8 293 62.5
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 8.2e-86 321.2 293 64.8
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.1e-85 320.9 298 65.8
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 1.4e-85 320.5 298 64.8
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 1.4e-85 320.5 260 68.8
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 3.1e-85 319.3 306 59.8
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 4.1e-85 318.9 298 64.4
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.2e-84 317.4 295 68.5
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 1.5e-84 317.0 292 62.7
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 1.5e-84 317.0 325 59.7
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 2.0e-84 316.6 299 63.2
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 2.0e-84 316.6 293 62.8
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 3.4e-84 315.8 296 63.5
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.4e-84 315.8 298 62.4
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 5.9e-84 315.1 294 68.4
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 5.9e-84 315.1 297 64.6
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 1.3e-83 313.9 295 67.1
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 5.0e-83 312.0 293 67.2
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 8.4e-83 311.2 254 72.8
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 3.2e-82 309.3 292 61.6
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 5.5e-82 308.5 297 60.3
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 9.3e-82 307.8 196 81.6
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 2.1e-81 306.6 291 60.5
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.0e-80 304.3 297 60.3
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.0e-80 304.3 294 61.9
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.0e-80 304.3 295 62.4
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 1.0e-80 304.3 296 62.2
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 2.3e-80 303.1 295 60.3
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 6.7e-80 301.6 292 61.6
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 1.1e-79 300.8 295 60.7
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.1e-79 300.8 291 60.8
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 1.5e-79 300.4 295 58.3
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 1.9e-79 300.1 295 61.4
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 3.3e-79 299.3 307 58.3
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 3.3e-79 299.3 292 61.3
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 5.7e-79 298.5 296 58.8
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 9.7e-79 297.7 295 61.0
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 9.7e-79 297.7 295 61.0
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 2.2e-78 296.6 297 61.3
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 3.7e-78 295.8 295 60.7
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 6.3e-78 295.0 298 61.7
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 6.3e-78 295.0 331 59.2
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 8.2e-78 294.7 196 78.6
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 8.2e-78 294.7 302 60.6
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 6.9e-77 291.6 297 57.9
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 9.0e-77 291.2 292 59.6
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 9.0e-77 291.2 292 59.6
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 2.6e-76 289.7 300 56.0
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.0e-75 285.4 292 59.2
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.1e-73 280.0 296 58.4
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.1e-73 280.0 296 58.4
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 5.1e-72 275.4 253 60.5
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 6.7e-72 275.0 297 55.6
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.1e-71 274.2 180 78.3
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.5e-71 273.9 321 54.5
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 3.3e-71 272.7 263 58.9
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 1.3e-70 270.8 291 56.7
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 6.3e-70 268.5 300 57.3
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.2e-68 264.2 173 79.2
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 1.3e-67 260.8 307 55.4
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 8.5e-67 258.1 325 49.8
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.5e-66 256.5 296 52.4
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 5.5e-66 255.4 296 55.1
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 3.6e-65 252.7 173 77.5
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 1.0e-64 251.1 276 55.4
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 8.2e-62 241.5 297 56.2
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 8.2e-62 241.5 297 53.9
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 4.5e-60 235.7 421 40.9
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 3.3e-55 219.5 296 50.3
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 7.5e-55 218.4 265 50.6
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 9.4e-50 201.4 133 79.7
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 1.4e-48 197.6 206 55.3
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 1.0e-43 181.4 158 65.2
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 4.4e-39 166.0 132 68.9
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 6.3e-38 162.2 181 54.7
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 2.4e-37 160.2 184 54.9
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 3.4e-31 139.8 152 53.9
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.1e-29 134.8 172 49.4
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 9.5e-26 121.7 77 77.9
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 3.6e-25 119.8 165 47.3
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.4e-21 107.8 128 50.0
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 6.8e-16 89.0 126 44.4
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 9.2e-13 78.6 120 47.5
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 6.0e-12 75.9 120 40.8
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 6.0e-12 75.9 118 43.2
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 6.8e-08 62.4 72 54.2
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 2.6e-07 60.5 124 36.3
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 7.6e-07 58.9 42 64.3


User provided reference genes

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