Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 7.9e-162 573.9 335 100.0
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 8.0e-98 361.3 348 71.6
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 1.2e-93 347.4 345 70.7
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 8.6e-76 288.1 343 64.1
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 1.1e-75 287.7 343 61.2
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 1.0e-31 141.7 391 38.6
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 2.2e-31 140.6 336 34.2
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 3.0e-28 130.2 378 34.7
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 3.9e-28 129.8 360 42.2
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 8.7e-28 128.6 373 37.8
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 1.9e-27 127.5 328 35.7
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 1.9e-27 127.5 360 41.9
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 1.9e-27 127.5 311 47.3
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 9.7e-27 125.2 381 32.5
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 1.3e-26 124.8 282 45.7
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 2.2e-26 124.0 375 37.3
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 6.3e-26 122.5 363 41.0
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 8.2e-26 122.1 380 36.3
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 1.1e-25 121.7 112 57.1
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 1.1e-25 121.7 391 37.9
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 2.4e-25 120.6 298 44.3
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 5.3e-25 119.4 118 52.5
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 1.5e-24 117.9 338 38.5
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 2.6e-24 117.1 288 32.6
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 3.4e-24 116.7 381 37.8
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 4.5e-24 116.3 98 58.2
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 4.5e-24 116.3 383 39.9
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.0e-23 115.2 248 37.5
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 1.3e-23 114.8 344 34.6
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.3e-23 114.8 102 56.9
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 2.2e-23 114.0 374 36.1
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 3.8e-23 113.2 292 37.3
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 5.0e-23 112.8 399 29.3
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 6.5e-23 112.5 107 53.3
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.1e-22 111.7 99 54.5
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.4e-22 111.3 111 47.7
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.5e-22 110.5 111 51.4
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 4.2e-22 109.8 322 39.8
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 5.5e-22 109.4 82 62.2
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 9.4e-22 108.6 115 49.6
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 9.4e-22 108.6 97 52.6
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 9.4e-22 108.6 317 42.0
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 1.6e-21 107.8 125 48.0
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 2.1e-21 107.5 106 51.9
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 2.7e-21 107.1 115 48.7
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 2.7e-21 107.1 311 39.9
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 3.6e-21 106.7 304 40.1
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 3.6e-21 106.7 152 44.7
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 3.6e-21 106.7 87 56.3
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 6.1e-21 105.9 113 47.8
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 6.1e-21 105.9 367 30.5
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 6.1e-21 105.9 111 47.7
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 7.9e-21 105.5 316 30.4
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 7.9e-21 105.5 413 35.1
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 1.0e-20 105.1 110 50.9
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 1.0e-20 105.1 123 43.9
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.4e-20 104.8 102 52.0
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 1.4e-20 104.8 100 56.0
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 1.8e-20 104.4 109 46.8
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.8e-20 104.4 345 31.6
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 1.8e-20 104.4 391 38.9
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 2.3e-20 104.0 118 48.3
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 3.0e-20 103.6 343 38.2
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.0e-20 103.6 388 36.1
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 5.1e-20 102.8 347 29.7
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 5.1e-20 102.8 345 31.6
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 6.7e-20 102.4 366 36.9
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 6.7e-20 102.4 320 34.4
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 8.8e-20 102.1 116 46.6
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 8.8e-20 102.1 321 34.0
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 8.8e-20 102.1 123 43.1
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 8.8e-20 102.1 100 49.0
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 1.1e-19 101.7 100 52.0
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 1.5e-19 101.3 93 53.8
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 1.5e-19 101.3 360 31.1
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 2.5e-19 100.5 93 53.8
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 3.3e-19 100.1 361 34.9
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 3.3e-19 100.1 94 54.3
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 3.3e-19 100.1 100 54.0
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.3e-19 100.1 383 33.7
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 3.3e-19 100.1 296 32.4
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 4.3e-19 99.8 367 36.2
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 4.3e-19 99.8 102 52.0
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 5.7e-19 99.4 101 47.5
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 7.4e-19 99.0 324 38.3
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 9.7e-19 98.6 112 44.6
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 1.3e-18 98.2 368 36.7
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 1.3e-18 98.2 365 38.1
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.7e-18 97.8 357 29.1
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 2.2e-18 97.4 367 36.8
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 2.2e-18 97.4 367 36.8
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.8e-18 97.1 366 36.1
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 2.8e-18 97.1 134 42.5
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 3.7e-18 96.7 322 32.0
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 4.8e-18 96.3 89 55.1
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 6.3e-18 95.9 320 31.9
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 8.2e-18 95.5 390 28.7
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.8e-17 94.4 284 42.6
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 2.4e-17 94.0 367 36.2
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 3.1e-17 93.6 294 32.7
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 5.3e-17 92.8 345 29.3
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 1.5e-16 91.3 377 36.1
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 3.4e-16 90.1 367 36.0
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 5.9e-16 89.4 374 34.2
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 5.9e-16 89.4 95 45.3
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 1.0e-15 88.6 320 28.1
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 1.0e-15 88.6 380 34.5
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 2.2e-15 87.4 408 29.4
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 2.9e-15 87.0 74 52.7
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 3.8e-15 86.7 95 44.2
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 2.6e-11 73.9 329 36.8
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 7.4e-11 72.4 59 54.2
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 1.3e-10 71.6 62 53.2
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 2.8e-10 70.5 125 36.8
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 4.8e-10 69.7 62 56.5
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.4e-09 67.4 48 62.5
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 3.1e-09 67.0 87 39.1
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 2.6e-08 63.9 87 37.9
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 4.5e-08 63.2 45 60.0
AagrBONN_evm.TU.Sc2ySwM_368.3264 Anthoceros agrestis HOM05D029403 ORTHO05D006930 7.2e-06 55.8 90 36.7
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 9.4e-06 55.5 69 34.8


User provided reference genes

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