Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 7.1e-44 180.3 94 100.0
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 3.5e-35 151.4 94 85.1
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 7.9e-35 150.2 94 85.1
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 3.3e-33 144.8 94 79.8
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 1.0e-26 123.2 94 69.1
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 6.7e-26 120.6 94 73.4
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 7.4e-25 117.1 94 70.2
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 2.1e-24 115.5 94 70.2
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 4.8e-24 114.4 94 59.6
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 5.3e-23 110.9 93 66.7
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 1.2e-22 109.8 94 67.0
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 2.0e-22 109.0 94 61.7
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 3.4e-22 108.2 84 70.2
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 5.8e-22 107.5 84 71.4
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 1.3e-21 106.3 93 63.4
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 2.9e-21 105.1 91 67.0
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 2.9e-21 105.1 95 60.0
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 2.9e-21 105.1 91 67.0
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 4.9e-21 104.4 84 66.7
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 4.9e-21 104.4 95 67.4
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 4.9e-21 104.4 91 67.0
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 6.5e-21 104.0 94 57.4
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 1.1e-20 103.2 83 65.1
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 1.4e-20 102.8 95 67.4
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 1.4e-20 102.8 83 69.9
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 2.5e-20 102.1 91 63.7
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.5e-20 102.1 95 66.3
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 2.5e-20 102.1 94 59.6
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 4.2e-20 101.3 85 67.1
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 4.2e-20 101.3 83 72.3
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 4.2e-20 101.3 83 72.3
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 7.1e-20 100.5 91 60.4
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 1.6e-19 99.4 91 65.9
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 1.6e-19 99.4 86 65.1
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 2.1e-19 99.0 84 65.5
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 3.5e-19 98.2 94 61.7
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 4.6e-19 97.8 79 68.4
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 6.0e-19 97.4 91 61.5
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 6.0e-19 97.4 89 65.2
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 6.0e-19 97.4 81 64.2
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 6.0e-19 97.4 89 64.0
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 1.0e-18 96.7 87 63.2
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 1.3e-18 96.3 91 60.4
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 2.3e-18 95.5 89 62.9
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 3.0e-18 95.1 84 64.3
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 8.7e-18 93.6 94 55.3
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 1.5e-17 92.8 86 64.0
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 1.9e-17 92.4 88 61.4
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 2.5e-17 92.0 86 61.6
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 3.3e-17 91.7 84 63.1
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 3.3e-17 91.7 84 63.1
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 5.7e-17 90.9 91 58.2
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 5.7e-17 90.9 95 53.7
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 5.7e-17 90.9 72 68.1
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 1.3e-16 89.7 84 61.9
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 1.6e-16 89.4 86 59.3
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 2.2e-16 89.0 86 57.0
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 2.2e-16 89.0 80 66.2
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 3.7e-16 88.2 77 70.1
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 4.8e-16 87.8 94 53.2
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 6.3e-16 87.4 86 58.1
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 2.4e-15 85.5 84 54.8
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 2.4e-15 85.5 91 54.9
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 4.1e-15 84.7 76 61.8
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 5.3e-15 84.3 91 53.8
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 6.9e-15 84.0 91 52.7
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 6.9e-15 84.0 78 61.5
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 9.0e-15 83.6 92 51.1
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 4.5e-14 81.3 75 62.7
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 4.5e-14 81.3 83 55.4
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 5.9e-14 80.9 78 55.1
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 1.0e-13 80.1 89 51.7
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 1.3e-13 79.7 75 61.3
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 1.3e-13 79.7 79 62.0
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 1.7e-13 79.3 79 55.7
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 1.7e-13 79.3 83 53.0
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 1.7e-13 79.3 93 47.3
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 6.5e-13 77.4 85 55.3
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 1.1e-12 76.6 83 50.6
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 3.2e-12 75.1 75 58.7
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 3.2e-12 75.1 83 53.0
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 5.5e-12 74.3 82 48.8
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 7.2e-12 73.9 80 52.5
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-11 73.2 60 58.3
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 1.0e-10 70.1 92 48.9
Carub.0001s3677 Capsella rubella HOM05D007627 ORTHO05D009640 3.9e-10 68.2 97 45.4
AL1G54240 Arabidopsis lyrata HOM05D007627 ORTHO05D009640 8.8e-10 67.0 95 43.2
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 1.1e-09 66.6 79 53.2
AT1G47820 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 2.5e-09 65.5 96 41.7
Carub.0001s3680 Capsella rubella HOM05D007627 ORTHO05D009640 3.3e-09 65.1 98 42.9
Carub.0001s3693 Capsella rubella HOM05D007627 ORTHO05D009640 5.7e-09 64.3 96 44.8
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 5.7e-09 64.3 77 53.2
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 2.8e-08 62.0 74 52.7
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 3.1e-07 58.5 81 46.9
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 3.1e-07 58.5 96 43.8
SHI28956 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 56.2 61 45.9


User provided reference genes

Program Settings