Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 5.3e-142 507.7 259 100.0
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 1.1e-113 413.7 260 82.7
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 2.3e-105 386.0 259 78.4
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 2.8e-90 335.9 259 66.8
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 1.8e-89 333.2 262 67.2
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 1.2e-88 330.5 258 66.7
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 2.6e-88 329.3 259 66.8
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 1.3e-87 327.0 259 67.2
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 2.9e-87 325.9 260 66.9
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 6.4e-87 324.7 260 67.3
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 1.9e-86 323.2 264 67.0
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 1.2e-85 320.5 264 66.3
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 1.6e-85 320.1 263 66.2
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 7.8e-85 317.8 264 63.6
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.3e-84 317.0 259 64.5
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 1.7e-84 316.6 259 62.9
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 9.6e-83 310.8 267 64.4
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 2.8e-82 309.3 262 62.6
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 4.8e-82 308.5 259 63.3
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 8.1e-82 307.8 260 63.1
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 1.4e-81 307.0 264 62.9
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 1.8e-81 306.6 259 63.3
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 2.4e-81 306.2 259 62.9
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 1.3e-79 300.4 261 61.3
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 6.4e-79 298.1 262 62.2
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 8.4e-79 297.7 262 63.0
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 1.1e-78 297.4 259 61.8
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 2.4e-78 296.2 263 62.0
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 3.2e-78 295.8 259 62.5
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 5.4e-78 295.0 257 61.5
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 7.1e-78 294.7 222 68.9
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 7.1e-78 294.7 257 61.5
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.2e-77 293.9 259 60.2
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.2e-77 293.9 259 60.2
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 1.6e-77 293.5 258 60.9
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 2.1e-77 293.1 263 62.4
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.0e-76 290.8 175 84.6
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.0e-76 290.8 260 61.9
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.0e-76 290.8 265 60.4
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 3.9e-76 288.9 260 58.8
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 5.1e-76 288.5 264 58.7
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.5e-75 287.0 263 58.2
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 1.5e-75 287.0 262 59.5
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 2.5e-75 286.2 262 59.9
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 2.5e-75 286.2 281 56.2
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 2.5e-75 286.2 249 61.8
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 4.3e-75 285.4 260 58.8
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 5.6e-75 285.0 262 58.8
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 5.6e-75 285.0 260 60.4
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 1.3e-74 283.9 261 59.8
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 1.3e-74 283.9 263 59.7
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 1.6e-74 283.5 259 61.0
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.6e-74 283.5 255 62.0
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 2.1e-74 283.1 221 63.8
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 2.1e-74 283.1 223 65.5
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 4.8e-74 282.0 221 63.3
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 4.8e-74 282.0 262 59.9
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 6.2e-74 281.6 262 58.8
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 6.2e-74 281.6 244 59.8
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 8.1e-74 281.2 259 60.2
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 8.1e-74 281.2 264 57.6
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 2.4e-73 279.6 252 60.3
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 2.4e-73 279.6 261 58.6
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 3.1e-73 279.3 262 57.6
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.0e-73 278.9 291 56.4
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 5.3e-73 278.5 263 59.3
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 5.3e-73 278.5 270 58.1
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 9.0e-73 277.7 261 58.6
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 3.4e-72 275.8 272 57.7
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 3.4e-72 275.8 272 57.7
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 3.4e-72 275.8 242 59.9
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 4.5e-72 275.4 261 57.1
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 4.5e-72 275.4 262 58.0
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 7.6e-72 274.6 261 58.6
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 1.3e-71 273.9 224 62.9
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 4.9e-71 271.9 261 58.6
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 8.4e-71 271.2 261 58.2
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 8.4e-71 271.2 257 57.2
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 1.1e-70 270.8 261 58.2
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 7.1e-70 268.1 232 59.9
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.2e-69 267.3 260 58.8
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 1.0e-68 264.2 262 55.3
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 1.0e-68 264.2 262 55.3
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 3.9e-68 262.3 270 53.7
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 5.1e-68 261.9 262 56.1
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 6.7e-68 261.5 172 72.7
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 8.7e-68 261.2 253 57.7
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 3.3e-67 259.2 225 60.4
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 5.6e-67 258.5 188 66.0
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 7.6e-64 248.1 265 52.1
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 1.3e-63 247.3 259 51.7
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 1.7e-63 246.9 281 52.0
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 2.2e-63 246.5 265 52.1
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.9e-62 243.4 229 57.6
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 3.2e-62 242.7 259 52.5
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 2.7e-61 239.6 263 50.2
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 7.9e-61 238.0 249 55.0
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 1.1e-59 234.2 226 54.9
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 9.7e-59 231.1 222 54.1
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 9.7e-59 231.1 226 53.5
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 1.4e-57 227.3 232 55.6
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 4.1e-57 225.7 154 74.0
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 1.3e-55 220.7 154 71.4
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 1.5e-48 197.2 180 57.8
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 5.1e-44 182.2 198 47.5
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.1e-43 181.0 241 51.0
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 7.4e-43 178.3 144 60.4
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 4.5e-40 169.1 170 51.8
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 2.9e-39 166.4 240 39.6
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 9.4e-38 161.4 156 60.9
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 2.7e-37 159.8 249 39.0
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 6.7e-36 155.2 147 59.9
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 3.3e-35 152.9 237 38.4
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 1.8e-33 147.1 105 68.6
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 1.3e-31 141.0 155 52.9
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.2e-30 136.3 138 60.9
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 8.5e-23 111.7 106 53.8
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 3.6e-21 106.3 68 72.1
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-13 80.1 240 27.9
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 2.6e-11 73.6 142 31.0
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 1.7e-07 60.8 128 33.6
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 5.6e-06 55.8 149 29.5


User provided reference genes

Program Settings