Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009308 Sechium edule HOM05D008251 ORTHO05D010450 1.5e-37 159.1 84 100.0
CsaV3_2G035600 Cucumis sativus L. HOM05D008251 ORTHO05D010450 1.9e-19 99.0 84 69.0
Lj2g0015966 Lotus japonicus HOM05D008251 ORTHO05D010450 6.8e-14 80.5 84 60.7
Glyma.01G189900 Glycine max HOM05D008251 ORTHO05D010450 4.4e-13 77.8 84 63.1
MD02G1178400 Malus domestica HOM05D008251 ORTHO05D010450 5.8e-13 77.4 82 57.3
Thecc.01G063000 Theobroma cacao HOM05D008251 ORTHO05D010450 9.9e-13 76.6 85 61.2
Duzib187G0638 Durio zibethinus HOM05D008251 ORTHO05D010450 2.9e-12 75.1 84 57.1
Ciclev10027375m.g Citrus clementina HOM05D008251 ORTHO05D010450 4.9e-12 74.3 86 55.8
FAN19G1615 Fragaria x ananassa HOM05D008251 ORTHO05D010450 8.4e-12 73.6 82 53.7
FAN23G2776 Fragaria x ananassa HOM05D008251 ORTHO05D010450 8.4e-12 73.6 82 53.7
FAN26G2689 Fragaria x ananassa HOM05D008251 ORTHO05D010450 8.4e-12 73.6 82 53.7
FAN28G2061 Fragaria x ananassa HOM05D008251 ORTHO05D010450 8.4e-12 73.6 82 53.7
Dinv26862 Davidia involucrata HOM05D008251 ORTHO05D010450 1.1e-11 73.2 72 58.3
Phvul.010G095200 Phaseolus vulgaris HOM05D008251 ORTHO05D010450 3.2e-11 71.6 67 58.2
FvH4_1g16720 Fragaria vesca HOM05D008251 ORTHO05D010450 4.1e-11 71.2 80 53.8
Peaxi162Scf00549g00047 Petunia axillaris HOM05D008251 ORTHO05D010450 4.1e-11 71.2 84 53.6
Oeu009921.1 Olea europaea HOM05D000033 ORTHO05D002493 5.4e-11 70.9 66 62.1
TWI73G1017 Tripterygium wilfordii HOM05D008251 ORTHO05D010450 5.4e-11 70.9 84 56.0
Ca_24740_v3 Cicer arietinum L. HOM05D008251 ORTHO05D010450 7.1e-11 70.5 67 59.7
Prupe.6G229400 Prunus persica HOM05D008251 ORTHO05D010450 7.1e-11 70.5 83 55.4
Psat2g168200 Pisum sativum HOM05D008251 ORTHO05D010450 9.2e-11 70.1 84 56.0
TPR.G26911 Trifolium pratense HOM05D008251 ORTHO05D010450 9.2e-11 70.1 84 52.4
Gohir.A10G225800 Gossypium hirsutum HOM05D008251 ORTHO05D010450 1.2e-10 69.7 85 55.3
COL.COLO4_11479 Corchorus olitorius HOM05D008251 ORTHO05D010450 2.1e-10 68.9 79 59.5
Cpa.g.sc6.102 Carica papaya HOM05D008251 ORTHO05D010450 3.5e-10 68.2 81 53.1
Gohir.D10G238324 Gossypium hirsutum HOM05D008251 ORTHO05D010450 4.6e-10 67.8 85 55.3
Gorai.011G273800 Gossypium raimondii HOM05D008251 ORTHO05D010450 4.6e-10 67.8 85 55.3
AT5G67265 Arabidopsis thaliana HOM05D008251 ORTHO05D010450 6.0e-10 67.4 84 51.2
Lj7C76G10 Lonicera japonica HOM05D001855 ORTHO05D002034 1.0e-09 66.6 75 54.7
Medtr5g016530 Medicago truncatula HOM05D008251 ORTHO05D010450 1.0e-09 66.6 86 53.5
Carub.0008s2724 Capsella rubella HOM05D008251 ORTHO05D010450 1.3e-09 66.2 82 47.6
AL8G44070 Arabidopsis lyrata HOM05D008251 ORTHO05D010450 3.9e-09 64.7 83 48.2
CAN.G370.14 Capsicum annuum HOM05D008251 ORTHO05D010450 5.1e-09 64.3 85 49.4
Sp2g29400 Schrenkiella parvula HOM05D008251 ORTHO05D010450 5.1e-09 64.3 61 55.7
THA.LOC104819244 Tarenaya hassleriana HOM05D008251 ORTHO05D010450 5.1e-09 64.3 85 52.9
Sopen02g037520 Solanum pennellii HOM05D008251 ORTHO05D010450 1.1e-08 63.2 64 57.8
QL05p026832 Quercus lobata HOM05D008251 ORTHO05D010450 1.5e-08 62.8 81 51.9
BcaC06g34809 Brassica carinata HOM05D008251 ORTHO05D010450 2.5e-08 62.0 85 44.7
DCAR_025755 Daucus carota HOM05D008251 ORTHO05D010450 2.5e-08 62.0 69 56.5
TAR381G0778 Trochodendron aralioides HOM05D009444 ORTHO05D011524 2.5e-08 62.0 82 51.2
A07p16690 Brassica napus HOM05D008251 ORTHO05D010450 7.3e-08 60.5 63 54.0
C07p24410 Brassica napus HOM05D008251 ORTHO05D010450 7.3e-08 60.5 63 54.0
BraA07t29392Z Brassica rapa HOM05D001855 ORTHO05D002493 7.3e-08 60.5 63 54.0
PGSC0003DMG400024956 Solanum tuberosum HOM05D008251 ORTHO05D010450 7.3e-08 60.5 84 47.6
CARHR280360 Cardamine hirsuta HOM05D008251 ORTHO05D010450 9.6e-08 60.1 75 50.7
Glyma.11G052300 Glycine max HOM05D008251 ORTHO05D010450 1.6e-07 59.3 86 52.3
Solyc02g092960.1 Solanum lycopersicum HOM05D008251 ORTHO05D010450 2.1e-07 58.9 84 50.0
SGA_v2.0_scaffold15G07364 Striga asiatica HOM05D000033 ORTHO05D002493 2.1e-07 58.9 66 50.0
Thhalv10005599m.g Eutrema salsugineum HOM05D008251 ORTHO05D010450 2.8e-07 58.5 84 46.4
Manes.13G118700 Manihot esculenta HOM05D008251 ORTHO05D010450 3.6e-07 58.2 85 48.2
Lalb_Chr09g0333891 Lupinus albus HOM05D008251 ORTHO05D010450 4.7e-07 57.8 87 49.4
Nn1g04713 Nelumbo nucifera HOM05D008251 ORTHO05D010450 4.7e-07 57.8 85 43.5
Gohir.D12G071900 Gossypium hirsutum HOM05D008251 ORTHO05D010450 3.1e-06 55.1 81 51.9
Prupe.1G430300 Prunus persica HOM05D009444 ORTHO05D011524 3.1e-06 55.1 81 45.7
QL02p003853 Quercus lobata HOM05D009444 ORTHO05D011524 3.1e-06 55.1 80 45.0
AUR62038251 Chenopodium quinoa HOM05D008251 ORTHO05D010450 4.0e-06 54.7 61 52.5
arahy.Tifrunner.gnm1.ann1.UR349I Arachis hypogaea HOM05D000049 ORTHO05D000027 6.9e-06 53.9 72 45.8
Manes.13G118801 Manihot esculenta HOM05D008251 ORTHO05D010450 9.0e-06 53.5 85 44.7


User provided reference genes

Program Settings