Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009256 Sechium edule HOM05D005385 ORTHO05D006768 2.9e-293 1011.1 510 100.0
Sed0009527 Sechium edule HOM05D005385 ORTHO05D006768 2.2e-203 712.6 510 74.3
CsaV3_2G034680 Cucumis sativus L. HOM05D005385 ORTHO05D006768 1.0e-189 667.2 510 70.8
ClCG02G009040 Citrullus lanatus HOM05D005385 ORTHO05D006768 7.4e-188 661.0 510 70.4
MELO3C019298.2 Cucumis melo HOM05D005385 ORTHO05D006768 6.3e-187 657.9 520 68.1
Haze_12803 Corylus avellana HOM05D005385 ORTHO05D006768 5.8e-108 395.6 519 46.8
Cfa014342 Carpinus fangiana HOM05D005385 ORTHO05D006768 1.9e-106 390.6 518 46.3
QL08p031674 Quercus lobata HOM05D005385 ORTHO05D006768 2.8e-102 376.7 520 46.7
Dinv08748 Davidia involucrata HOM05D005385 ORTHO05D006768 2.7e-97 360.1 518 43.8
Dinv39728 Davidia involucrata HOM05D005385 ORTHO05D006768 2.5e-95 353.6 518 42.3
Potri.002G227200 Populus trichocarpa HOM05D005385 ORTHO05D006768 4.3e-87 326.2 520 41.2
CSS0010990 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 1.3e-86 324.7 519 40.7
Prupe.3G214000 Prunus persica HOM05D005385 ORTHO05D006768 4.8e-86 322.8 539 41.0
CANSAT64G0851 Cannabis sativa HOM05D005385 ORTHO05D006768 1.1e-85 321.6 517 41.6
CiPaw.03G158000 Carya illinoinensis HOM05D005385 ORTHO05D006768 2.4e-85 320.5 462 43.7
Sabra02G0173800 Salix brachista HOM05D005385 ORTHO05D006768 2.7e-81 307.0 535 39.6
TAR627G0869 Trochodendron aralioides HOM05D005385 ORTHO05D006768 3.9e-80 303.1 522 40.2
TWI36G1417 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 1.3e-78 298.1 639 35.5
Rhsim06G0165400 Rhododendron simsii HOM05D005385 ORTHO05D006768 3.7e-78 296.6 522 38.9
vmacro12184 Vaccinium macrocarpon HOM05D005385 ORTHO05D006768 8.2e-78 295.4 520 37.3
Actinidia09739 Actinidia chinensis HOM05D005385 ORTHO05D006768 1.4e-77 294.7 447 42.3
Manes.12G072400 Manihot esculenta HOM05D005385 ORTHO05D006768 2.5e-74 283.9 540 39.3
TWI75G1493 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 3.6e-73 280.0 638 34.6
FAN14G3333 Fragaria x ananassa HOM05D005385 ORTHO05D006768 6.1e-73 279.3 650 33.8
FvH4_6g42760 Fragaria vesca HOM05D005385 ORTHO05D006768 6.7e-72 275.8 650 33.5
RcHm_v2.0_Chr2g0158651 Rosa chinensis HOM05D005385 ORTHO05D006768 1.3e-70 271.6 651 33.0
GSVIVG01030472001 Vitis vinifera HOM05D005385 ORTHO05D006768 2.2e-70 270.8 514 37.4
FAN09G2639 Fragaria x ananassa HOM05D005385 ORTHO05D006768 2.4e-69 267.3 652 33.0
FAN05G0986 Fragaria x ananassa HOM05D005385 ORTHO05D006768 1.6e-68 264.6 650 33.2
FAN02G3845 Fragaria x ananassa HOM05D005385 ORTHO05D006768 2.6e-68 263.8 648 32.6
Phvul.003G071200 Phaseolus vulgaris HOM05D005385 ORTHO05D006768 2.6e-68 263.8 429 41.5
MD09G1071600 Malus domestica HOM05D005385 ORTHO05D006768 1.0e-67 261.9 660 34.1
Glyma.08G294700 Glycine max HOM05D005385 ORTHO05D006768 5.0e-67 259.6 523 37.3
Glyma.18G128300 Glycine max HOM05D005385 ORTHO05D006768 2.5e-66 257.3 521 37.6
Lj4g0021844 Lotus japonicus HOM05D005385 ORTHO05D006768 2.5e-66 257.3 502 37.5
PGR142G3338 Punica granatum HOM05D005385 ORTHO05D006768 2.5e-66 257.3 521 37.6
Aqoxy5G00128 Aquilegia oxysepala HOM05D005385 ORTHO05D006768 2.1e-65 254.2 530 35.3
CSS0011006 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 3.6e-65 253.4 516 34.1
Psat4g129200 Pisum sativum HOM05D005385 ORTHO05D006768 8.8e-64 248.8 396 41.7
TPR.G29371 Trifolium pratense HOM05D005385 ORTHO05D006768 8.2e-62 242.3 393 40.5
Lj8A127T46 Lonicera japonica HOM05D005385 ORTHO05D006768 9.1e-61 238.8 618 30.7
Eucgr.K00777 Eucalyptus grandis HOM05D005385 ORTHO05D006768 1.2e-60 238.4 505 37.0
Sopen07g025370 Solanum pennellii HOM05D005385 ORTHO05D006768 2.1e-57 227.6 602 30.9
Solyc07g049750.3 Solanum lycopersicum HOM05D005385 ORTHO05D006768 4.7e-57 226.5 607 31.1
CAN.G290.3 Capsicum annuum HOM05D005385 ORTHO05D006768 6.1e-57 226.1 589 31.4
PGSC0003DMG400001080 Solanum tuberosum HOM05D005385 ORTHO05D006768 1.4e-56 224.9 593 30.5
Lalb_Chr10g0107231 Lupinus albus HOM05D005385 ORTHO05D006768 1.8e-56 224.6 504 34.5
MD17G1100500 Malus domestica HOM05D005385 ORTHO05D006768 4.0e-56 223.4 492 36.2
Medtr8g061890 Medicago truncatula HOM05D005385 ORTHO05D006768 3.4e-55 220.3 522 34.5
Cc05_g03620 Coffea canephora HOM05D005385 ORTHO05D006768 2.8e-54 217.2 610 31.0
MSTRG.14146 Avicennia marina HOM05D005385 ORTHO05D006768 6.3e-54 216.1 539 33.4
Ca_22840_v3 Cicer arietinum L. HOM05D005385 ORTHO05D006768 1.8e-53 214.5 516 33.3
Manes.13G068800 Manihot esculenta HOM05D005385 ORTHO05D006768 1.0e-51 208.8 241 48.5
Thecc.01G177600 Theobroma cacao HOM05D005385 ORTHO05D006768 1.0e-51 208.8 440 37.3
Oeu036745.2 Olea europaea HOM05D005385 ORTHO05D006768 1.7e-51 208.0 475 34.3
arahy.Tifrunner.gnm1.ann1.1871C9 Arachis hypogaea HOM05D005385 ORTHO05D006768 1.9e-50 204.5 307 40.7
Ciclev10014304m.g Citrus clementina HOM05D005385 ORTHO05D006768 2.5e-50 204.1 503 33.2
arahy.Tifrunner.gnm1.ann1.N42FWL Arachis hypogaea HOM05D005385 ORTHO05D006768 3.3e-50 203.8 309 40.5
Duzib138G1383 Durio zibethinus HOM05D005385 ORTHO05D006768 4.7e-49 199.9 404 40.1
Nitab4.5_0008855g0010 Nicotiana tabacum HOM05D005385 ORTHO05D006768 8.0e-49 199.1 635 29.3
COL.COLO4_21830 Corchorus olitorius HOM05D005385 ORTHO05D006768 2.0e-47 194.5 372 38.4
HanXRQChr16g0506711 Helianthus annuus HOM05D005385 ORTHO05D006768 2.2e-46 191.0 594 29.6
Nitab4.5_0004549g0030 Nicotiana tabacum HOM05D005385 ORTHO05D006768 2.8e-46 190.7 443 32.5
MBI14_g48057_MAGBIO Magnolia biondii HOM05D005385 ORTHO05D006768 8.3e-46 189.1 722 27.1
Atru.chr6.3225 Acer truncatum HOM05D005385 ORTHO05D006768 1.6e-44 184.9 548 30.7
SGA_v2.0_scaffold159G37574 Striga asiatica HOM05D005385 ORTHO05D006768 5.9e-44 183.0 534 32.2
DCAR_021157 Daucus carota HOM05D005385 ORTHO05D006768 1.5e-42 178.3 399 30.8
Lsat_1_v5_gn_7_93260 Lactuca sativa HOM05D005385 ORTHO05D006768 5.6e-42 176.4 565 28.7
Gohir.D07G088200 Gossypium hirsutum HOM05D005385 ORTHO05D006768 7.3e-42 176.0 729 26.2
Sc21g0001240 Simmondsia chinensis HOM05D005385 ORTHO05D006768 7.3e-42 176.0 401 34.2
PSO339G4227 Papaver somniferum HOM05D005385 ORTHO05D006768 2.1e-41 174.5 523 30.8
Nn8g40525 Nelumbo nucifera HOM05D005385 ORTHO05D006768 2.8e-41 174.1 242 39.3
Lj1A770T48 Lonicera japonica HOM05D005385 ORTHO05D006768 3.6e-41 173.7 286 37.4
Duzib133G0129 Durio zibethinus HOM05D005385 ORTHO05D006768 1.4e-40 171.8 400 37.0
PSO384G2490 Papaver somniferum HOM05D005385 ORTHO05D006768 2.3e-40 171.0 526 31.4
Duzib211G0060 Durio zibethinus HOM05D005385 ORTHO05D006768 3.1e-40 170.6 392 37.0
Gohir.A07G081700 Gossypium hirsutum HOM05D005385 ORTHO05D006768 4.0e-40 170.2 734 25.9
Gorai.001G094400 Gossypium raimondii HOM05D005385 ORTHO05D006768 1.2e-39 168.7 757 25.8
Migut.H01229 Erythranthe guttata HOM05D005385 ORTHO05D006768 7.8e-36 156.0 579 28.2
BcaC07g36864 Brassica carinata HOM05D005385 ORTHO05D006768 1.0e-35 155.6 476 30.9
Sp1g03960 Schrenkiella parvula HOM05D005385 ORTHO05D006768 1.7e-35 154.8 245 40.0
AT1G05087 Arabidopsis thaliana HOM05D005385 ORTHO05D006768 2.3e-35 154.5 244 40.6
ECA236G2918 Erigeron canadensis HOM05D005385 ORTHO05D006768 3.0e-35 154.1 370 33.0
THA.LOC104801549 Tarenaya hassleriana HOM05D005385 ORTHO05D006768 2.5e-34 151.0 196 44.4
Aa31LG1G19650 Aethionema arabicum HOM05D005385 ORTHO05D006768 5.6e-34 149.8 682 25.7
MD17G1100200 Malus domestica HOM05D005385 ORTHO05D006768 1.2e-33 148.7 206 44.7
Thhalv10006711m.g Eutrema salsugineum HOM05D005385 ORTHO05D006768 1.6e-33 148.3 237 40.1
Carub.0001s0438 Capsella rubella HOM05D005385 ORTHO05D006768 3.6e-33 147.1 688 25.1
BraA08t35560Z Brassica rapa HOM05D005385 ORTHO05D006768 2.3e-32 144.4 699 26.8
SalBow1G8666 Salvia bowleyana HOM05D005385 ORTHO05D006768 2.3e-32 144.4 612 27.3
Peaxi162Scf00007g00224 Petunia axillaris HOM05D005385 ORTHO05D006768 4.0e-32 143.7 497 27.4
A08p36580 Brassica napus HOM05D005385 ORTHO05D006768 1.2e-31 142.1 714 26.2
Ah.03g136860 Amaranthus hybridus HOM05D005385 ORTHO05D006768 3.4e-31 140.6 477 28.9
SGA_v2.0_scaffold49G18342 Striga asiatica HOM05D005385 ORTHO05D006768 3.7e-30 137.1 246 37.0
EL10Ac6g14187 Beta vulgaris HOM05D005385 ORTHO05D006768 2.4e-29 134.4 310 33.2
AL1G14860 Arabidopsis lyrata HOM05D005385 ORTHO05D006768 3.2e-29 134.0 730 24.2
BolC8t46974H Brassica oleracea HOM05D005385 ORTHO05D006768 3.2e-29 134.0 684 26.0
Hma1.2p1_0895F.1_g233780 Hydrangea macrophylla HOM05D005385 ORTHO05D006768 3.2e-29 134.0 301 34.2
VMungo0251G0036 Vigna mungo HOM05D005385 ORTHO05D006768 3.2e-29 134.0 306 34.3
C08p01740 Brassica napus HOM05D005385 ORTHO05D006768 2.7e-28 131.0 684 25.9
BcaB02g06881 Brassica carinata HOM05D005385 ORTHO05D006768 4.6e-28 130.2 223 37.7
CDE02G3131 Ceratophyllum demersum HOM05D005385 ORTHO05D006768 7.8e-28 129.4 324 31.5
BcaC05g24419 Brassica carinata HOM05D005385 ORTHO05D006768 1.7e-27 128.3 712 25.4
BolC5t29109H Brassica oleracea HOM05D005385 ORTHO05D006768 6.6e-27 126.3 717 25.2
VMungo0251G1899 Vigna mungo HOM05D005385 ORTHO05D006768 6.6e-27 126.3 110 54.5
CARHR004550 Cardamine hirsuta HOM05D005385 ORTHO05D006768 5.6e-26 123.2 711 24.3
Sc06g0009590 Simmondsia chinensis HOM05D005385 ORTHO05D006768 1.2e-25 122.1 154 42.2
BraA10t42636Z Brassica rapa HOM05D005385 ORTHO05D006768 1.6e-25 121.7 724 24.6
C05p03280 Brassica napus HOM05D005385 ORTHO05D006768 2.1e-25 121.3 717 25.0
AUR62043283 Chenopodium quinoa HOM05D005385 ORTHO05D006768 2.8e-25 120.9 507 28.4
A10p03600 Brassica napus HOM05D005385 ORTHO05D006768 3.6e-25 120.6 714 24.5
SalBow1G7937 Salvia bowleyana HOM05D005385 ORTHO05D006768 4.7e-25 120.2 617 25.4
unitig_52.g17609 Utricularia gibba HOM05D005385 ORTHO05D006768 6.2e-25 119.8 383 29.5
Rhsim06G0165100 Rhododendron simsii HOM05D005385 ORTHO05D006768 1.5e-23 115.2 325 30.8
AUR62043954 Chenopodium quinoa HOM05D005385 ORTHO05D006768 2.0e-23 114.8 488 27.7
CDE05G0211 Ceratophyllum demersum HOM05D005385 ORTHO05D006768 2.7e-20 104.4 525 26.5
Lj1P773T39 Lonicera japonica HOM05D005385 ORTHO05D006768 6.6e-19 99.8 107 44.9
MD17G1100100 Malus domestica HOM05D005385 ORTHO05D006768 3.6e-17 94.0 174 40.2
DCAR_021158 Daucus carota HOM05D005385 ORTHO05D006768 6.8e-16 89.7 250 29.6
CSS0039058 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 5.8e-15 86.7 323 26.6
Lj3P615T7 Lonicera japonica HOM05D005385 ORTHO05D006768 9.9e-15 85.9 106 41.5
Rhsim06G0164700 Rhododendron simsii HOM05D005385 ORTHO05D006768 6.4e-14 83.2 374 27.3
RhsimUnG0010700 Rhododendron simsii HOM05D005385 ORTHO05D006768 6.4e-14 83.2 374 27.3
Nitab4.5_0000130g0270 Nicotiana tabacum HOM05D005385 ORTHO05D006768 3.0e-11 74.3 517 24.8
Duzib133G0609 Durio zibethinus HOM05D005385 ORTHO05D006768 3.9e-11 73.9 299 28.4
HPP92_018560 Vanilla planifolia HOM05D005385 ORTHO05D006768 5.1e-11 73.6 94 40.4
Lj1A781G48 Lonicera japonica HOM05D005385 ORTHO05D006768 2.4e-08 64.7 117 34.2


User provided reference genes

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