Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009245 Sechium edule HOM05D009483 ORTHO05D010434 3.8e-24 114.8 98 100.0
Sed0012458 Sechium edule HOM05D009483 ORTHO05D010434 7.0e-18 94.0 98 88.8
MELO3C028281.2 Cucumis melo HOM05D019565 ORTHO05D010434 8.3e-11 70.5 66 78.8
ClCG05G020420 Citrullus lanatus HOM05D019565 ORTHO05D029023 1.1e-10 70.1 65 78.5
MELO3C016803.2 Cucumis melo HOM05D019565 ORTHO05D010434 2.7e-09 65.5 40 80.0
Nitab4.5_0000934g0160 Nicotiana tabacum HOM05D009483 ORTHO05D010434 4.5e-09 64.7 94 74.5
CSS0042505 Camellia sinensis var. sinensis HOM05D009483 ORTHO05D010434 7.7e-09 63.9 92 77.2
arahy.Tifrunner.gnm1.ann1.CVT8CA Arachis hypogaea HOM05D014667 ORTHO05D010434 1.7e-08 62.8 98 76.5
Nitab4.5_0004707g0020 Nicotiana tabacum HOM05D009483 ORTHO05D010434 2.2e-08 62.4 94 73.4
GSVIVG01009377001 Vitis vinifera HOM05D009483 ORTHO05D010434 3.8e-08 61.6 79 86.1
CiPaw.15G047300 Carya illinoinensis HOM05D009483 ORTHO05D010434 6.5e-08 60.8 94 73.4
TPR.G33686 Trifolium pratense HOM05D014667 ORTHO05D010434 6.5e-08 60.8 81 81.5
Lalb_Chr23g0267411 Lupinus albus HOM05D014667 ORTHO05D010434 8.5e-08 60.5 81 82.7
PGR083G2500 Punica granatum HOM05D000634 ORTHO05D010557 8.5e-08 60.5 91 75.8
Atru.chr13.800 Acer truncatum HOM05D009483 ORTHO05D010434 1.5e-07 59.7 94 70.2
CAN.G1054.20 Capsicum annuum HOM05D009483 ORTHO05D010434 1.5e-07 59.7 92 72.8
Aa31LG6G15440 Aethionema arabicum HOM05D014382 ORTHO05D010434 1.9e-07 59.3 91 78.0
Cfa018025 Carpinus fangiana HOM05D009483 ORTHO05D010434 1.9e-07 59.3 78 85.9
PGSC0003DMG400021535 Solanum tuberosum HOM05D009483 ORTHO05D010434 2.5e-07 58.9 94 70.2
Sopen04g031780 Solanum pennellii HOM05D009483 ORTHO05D010434 4.2e-07 58.2 94 70.2
THA.LOC104812585 Tarenaya hassleriana HOM05D014382 ORTHO05D010434 9.4e-07 57.0 78 84.6
Carub.0001s2620 Capsella rubella HOM05D014382 ORTHO05D010434 2.1e-06 55.8 91 73.6
Lalb_Chr08g0245481 Lupinus albus HOM05D014667 ORTHO05D010434 2.1e-06 55.8 81 80.2
Medtr3g102780 Medicago truncatula HOM05D000634 ORTHO05D010557 2.1e-06 55.8 99 67.7
AT1G27695 Arabidopsis thaliana HOM05D014382 ORTHO05D010434 3.6e-06 55.1 91 73.6
Sp1g23920 Schrenkiella parvula HOM05D014382 ORTHO05D010434 4.7e-06 54.7 89 75.3
AL1G41220 Arabidopsis lyrata HOM05D014382 ORTHO05D010434 8.0e-06 53.9 87 77.0
Prupe.1G426000 Prunus persica HOM05D017249 ORTHO05D010434 8.0e-06 53.9 89 71.9
TWI12G1118 Tripterygium wilfordii HOM05D000634 ORTHO05D010557 8.0e-06 53.9 79 79.7


User provided reference genes

Program Settings