Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 2.9e-180 635.2 333 100.0
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 9.4e-107 391.0 391 60.9
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 9.1e-102 374.4 385 59.5
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 8.5e-100 367.9 391 57.5
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 8.0e-98 361.3 391 57.0
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 5.8e-56 222.2 385 43.1
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 2.9e-55 219.9 389 42.4
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 1.1e-54 218.0 393 42.0
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 3.9e-52 209.5 392 40.3
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.1e-51 208.0 397 40.3
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 3.3e-51 206.5 399 39.8
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.3e-51 206.5 390 40.5
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.8e-50 203.4 391 39.4
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 2.3e-49 200.3 383 38.6
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 6.8e-49 198.7 385 38.4
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 1.5e-48 197.6 379 40.1
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.0e-48 197.2 385 40.0
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 3.4e-48 196.4 381 40.4
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 5.8e-48 195.7 383 38.4
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 2.9e-47 193.4 385 41.0
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 4.9e-47 192.6 398 38.7
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 8.3e-47 191.8 371 37.7
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 1.4e-46 191.0 396 38.4
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 1.9e-46 190.7 388 39.2
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 3.2e-46 189.9 372 39.0
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 4.1e-46 189.5 371 37.7
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 5.4e-46 189.1 396 37.9
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 5.4e-46 189.1 383 38.9
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 7.1e-46 188.7 383 39.2
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 4.6e-45 186.0 365 38.4
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 7.8e-45 185.3 366 38.0
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.0e-44 184.9 379 38.3
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.3e-44 184.5 387 37.7
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 1.3e-44 184.5 403 38.5
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 5.1e-44 182.6 379 38.0
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 6.6e-44 182.2 370 37.6
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 8.6e-44 181.8 403 38.2
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 3.3e-43 179.9 366 38.8
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 4.3e-43 179.5 387 38.5
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 5.6e-43 179.1 403 38.5
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 7.3e-43 178.7 403 37.0
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 9.6e-43 178.3 394 38.8
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 4.7e-42 176.0 379 36.9
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 2.4e-41 173.7 303 42.2
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 2.4e-41 173.7 407 36.1
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 3.1e-41 173.3 387 38.2
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 5.2e-41 172.6 389 37.5
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 2.0e-40 170.6 407 36.1
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 1.7e-39 167.5 370 37.0
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 1.7e-39 167.5 393 35.9
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.2e-39 167.2 313 39.3
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.1e-38 164.9 390 35.9
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 4.2e-38 162.9 426 34.5
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 2.1e-37 160.6 442 33.7
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 2.1e-37 160.6 362 35.9
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 2.7e-37 160.2 361 37.1
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 3.9e-36 156.4 375 36.8
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 6.6e-36 155.6 392 34.9
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 8.7e-36 155.2 397 35.3
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 8.7e-36 155.2 342 36.5
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 3.3e-35 153.3 353 35.4
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 7.3e-35 152.1 343 36.2
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 7.3e-35 152.1 342 37.7
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 9.6e-35 151.8 405 35.6
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 9.6e-35 151.8 406 34.0
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 4.8e-34 149.4 406 34.0
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 2.4e-33 147.1 351 37.0
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 6.9e-33 145.6 401 32.4
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 1.5e-32 144.4 352 36.4
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 5.8e-32 142.5 360 35.6
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 9.9e-32 141.7 401 34.2
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 7.1e-30 135.6 374 33.7
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 1.2e-29 134.8 351 33.9
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 2.7e-29 133.7 388 32.2
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 6.0e-29 132.5 387 32.0
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 2.3e-28 130.6 348 34.2
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 2.3e-28 130.6 348 34.2
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 3.0e-28 130.2 395 34.4
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 3.0e-28 130.2 313 36.4
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 2.5e-27 127.1 321 35.8
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 1.3e-26 124.8 317 35.3
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 2.8e-26 123.6 249 37.8
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 3.6e-26 123.2 350 33.1
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 1.8e-25 120.9 360 31.1
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 2.0e-24 117.5 323 35.0
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 1.3e-23 114.8 373 30.8
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 2.2e-23 114.0 414 29.7
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 2.2e-23 114.0 378 32.3
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 1.4e-22 111.3 328 33.5
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 2.7e-21 107.1 362 31.5
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 4.6e-21 106.3 414 28.7
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 5.1e-20 102.8 348 30.2
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 2.5e-19 100.5 344 29.9
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 5.6e-19 99.4 378 30.2
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 2.4e-17 94.0 317 30.0
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 4.0e-17 93.2 316 29.7
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.6e-16 90.5 403 28.5
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 7.6e-16 89.0 278 30.9
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 7.6e-16 89.0 312 31.1
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 2.9e-15 87.0 243 32.5
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 8.4e-15 85.5 350 28.6
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 3.2e-14 83.6 325 28.3
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 1.6e-13 81.3 349 28.1
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 6.0e-13 79.3 309 31.1
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 2.3e-12 77.4 335 29.0
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 2.4e-09 67.4 150 35.3
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 2.4e-09 67.4 333 26.7
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 1.2e-08 65.1 150 34.7
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 1.5e-08 64.7 150 34.0
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 2.0e-08 64.3 380 28.9
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 2.6e-08 63.9 157 37.6
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 6.5e-07 59.3 196 32.1
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 8.4e-07 58.9 84 45.2


User provided reference genes

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