Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 1.6e-194 682.6 351 100.0
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 2.3e-148 529.3 353 79.6
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 1.9e-142 509.6 351 77.2
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 6.6e-135 484.6 351 74.9
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 1.7e-111 406.8 342 63.7
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 3.9e-111 405.6 337 64.1
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 8.6e-111 404.4 346 63.6
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.6e-109 400.2 346 61.3
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 6.8e-108 394.8 351 62.1
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 6.8e-108 394.8 351 61.5
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 2.6e-107 392.9 344 63.1
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.6e-107 392.9 358 60.3
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 3.4e-107 392.5 356 61.2
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 3.4e-107 392.5 352 61.9
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 1.3e-106 390.6 354 60.2
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 3.8e-106 389.0 355 63.1
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 7.1e-105 384.8 344 61.6
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 1.6e-104 383.6 334 61.4
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 2.7e-104 382.9 356 59.6
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 3.3e-102 375.9 362 59.1
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 9.6e-102 374.4 360 57.5
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 3.6e-101 372.5 339 61.7
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 4.8e-101 372.1 351 57.5
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 6.9e-100 368.2 256 71.5
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 1.2e-99 367.5 285 66.0
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 4.4e-99 365.5 343 57.1
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 5.8e-99 365.2 267 67.8
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 3.8e-98 362.5 367 56.9
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 8.4e-98 361.3 364 56.3
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 1.1e-97 360.9 356 56.5
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 1.9e-97 360.1 256 68.4
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 9.3e-97 357.8 311 59.8
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 9.3e-97 357.8 351 56.7
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.2e-96 357.5 351 57.0
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.1e-96 356.7 311 59.8
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.6e-96 355.5 329 58.4
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 2.3e-95 353.2 256 69.5
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 2.3e-95 353.2 336 55.4
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 3.9e-95 352.4 352 55.4
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 1.9e-94 350.1 269 66.2
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 5.6e-94 348.6 269 65.1
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 4.8e-93 345.5 283 63.3
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 4.8e-93 345.5 338 57.1
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 8.1e-93 344.7 305 60.0
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.4e-92 343.2 362 54.1
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 2.4e-92 343.2 276 63.4
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 3.1e-92 342.8 269 62.5
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 4.0e-92 342.4 333 56.5
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 1.2e-91 340.9 323 54.8
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.5e-91 340.5 328 56.4
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 2.0e-91 340.1 334 57.2
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 2.6e-91 339.7 259 65.3
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 3.4e-91 339.3 269 62.8
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 3.4e-91 339.3 305 59.3
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 1.3e-90 337.4 360 54.2
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 1.7e-90 337.0 357 52.7
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 1.7e-90 337.0 356 52.8
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 2.9e-90 336.3 345 52.5
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 4.9e-90 335.5 269 63.2
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 4.9e-90 335.5 353 53.5
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 1.4e-89 334.0 273 60.4
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.9e-89 333.6 341 53.4
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.9e-89 333.6 267 61.4
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 7.1e-89 331.6 341 52.5
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 4.6e-88 328.9 315 56.2
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 4.6e-88 328.9 271 62.7
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 3.9e-87 325.9 287 56.4
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 8.7e-87 324.7 308 54.2
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 8.7e-87 324.7 336 54.5
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 4.3e-86 322.4 357 52.1
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 1.3e-85 320.9 339 52.8
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 1.6e-85 320.5 287 57.8
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 2.8e-85 319.7 334 52.7
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 3.7e-85 319.3 341 50.1
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 1.1e-84 317.8 351 51.3
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 4.0e-84 315.8 260 60.8
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 4.0e-84 315.8 404 46.8
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 5.3e-84 315.5 260 58.8
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 2.0e-83 313.5 273 57.5
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 2.6e-83 313.2 286 55.2
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 4.5e-83 312.4 260 60.0
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 4.5e-83 312.4 292 54.8
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 5.8e-83 312.0 264 58.0
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 2.9e-82 309.7 297 53.9
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 3.2e-81 306.2 258 60.5
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 5.5e-81 305.4 259 59.5
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 9.3e-81 304.7 250 62.4
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.6e-80 303.9 269 56.9
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 2.1e-80 303.5 353 50.4
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 2.7e-80 303.1 306 53.9
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 4.6e-80 302.4 336 51.8
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 4.6e-80 302.4 352 49.1
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 1.5e-78 297.4 305 53.4
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 4.3e-78 295.8 316 52.2
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 5.7e-78 295.4 258 59.3
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 5.3e-76 288.9 357 45.1
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 3.8e-74 282.7 234 61.1
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 9.3e-73 278.1 250 59.2
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 2.1e-72 276.9 232 61.2
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 4.6e-72 275.8 349 48.4
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 7.9e-72 275.0 207 65.7
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 5.1e-71 272.3 267 52.4
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 2.9e-66 256.5 250 56.0
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 3.9e-55 219.5 236 49.2
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.3e-50 204.5 203 56.2
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 5.9e-43 179.1 162 57.4
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 1.3e-37 161.4 136 55.9
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.8e-29 133.7 279 33.3
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 3.0e-23 113.6 290 31.0
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.8e-20 104.4 209 35.4
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 1.1e-17 95.1 75 62.7
Pp3c2_31610 Physcomitrium patens HOM05D037891 ORTHO05D008297 1.8e-15 87.8 269 27.5
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 3.5e-11 73.6 290 26.9
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 3.9e-10 70.1 324 26.5
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 6.8e-07 59.3 48 52.1
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 1.5e-06 58.2 92 38.0


User provided reference genes

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