Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 4.0e-99 364.8 186 100.0
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 1.8e-91 339.3 186 91.9
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 1.3e-89 333.2 210 82.9
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 2.4e-83 312.4 204 81.4
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 8.2e-76 287.3 193 77.2
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 2.6e-74 282.3 193 76.2
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 2.5e-72 275.8 193 74.1
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 3.2e-72 275.4 195 76.4
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 1.2e-71 273.5 193 74.6
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 6.7e-70 267.7 192 73.4
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 8.7e-70 267.3 193 73.6
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 3.3e-69 265.4 187 74.9
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 4.8e-68 261.5 178 74.2
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 1.8e-67 259.6 191 71.7
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 3.1e-67 258.8 186 73.1
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 6.9e-67 257.7 194 72.2
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 1.5e-66 256.5 179 73.7
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 2.6e-66 255.8 194 70.6
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 2.9e-65 252.3 184 72.3
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 3.8e-65 251.9 195 70.3
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 8.5e-65 250.8 179 73.7
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 8.5e-65 250.8 178 73.0
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 4.2e-64 248.4 191 72.3
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 4.2e-64 248.4 194 67.5
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 2.7e-63 245.7 178 72.5
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 7.9e-63 244.2 175 70.9
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.4e-62 243.4 194 65.5
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 1.8e-62 243.0 179 71.5
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 2.3e-62 242.7 192 67.7
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 3.9e-62 241.9 180 70.0
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 3.9e-62 241.9 181 70.7
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 5.1e-62 241.5 191 64.4
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 6.7e-62 241.1 176 69.9
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 6.7e-62 241.1 176 69.9
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 1.1e-61 240.4 183 70.5
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 1.1e-61 240.4 184 70.7
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 1.5e-61 240.0 204 69.1
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 2.0e-61 239.6 175 69.1
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 2.5e-61 239.2 204 68.1
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 5.7e-61 238.0 186 69.9
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 9.7e-61 237.3 186 68.3
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.3e-60 236.9 204 68.6
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 1.7e-60 236.5 178 71.3
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 2.8e-60 235.7 191 66.0
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 6.3e-60 234.6 186 66.7
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 1.1e-59 233.8 186 69.4
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 1.8e-59 233.0 190 66.8
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 2.4e-59 232.6 185 68.1
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 6.9e-59 231.1 193 64.8
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 6.9e-59 231.1 161 73.9
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 9.1e-59 230.7 188 65.4
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 1.5e-58 229.9 192 66.1
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 2.6e-58 229.2 192 65.6
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 2.6e-58 229.2 191 65.4
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 3.4e-58 228.8 179 68.2
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 3.4e-58 228.8 193 64.2
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 3.4e-58 228.8 191 65.4
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 5.9e-58 228.0 192 64.6
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 5.9e-58 228.0 174 69.0
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 5.9e-58 228.0 191 67.0
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 5.9e-58 228.0 179 68.7
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 1.0e-57 227.3 192 65.1
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 1.0e-57 227.3 180 68.9
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 1.3e-57 226.9 186 64.5
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 1.7e-57 226.5 192 64.6
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 2.2e-57 226.1 192 64.1
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 2.2e-57 226.1 176 69.9
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 2.2e-57 226.1 174 67.2
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 1.9e-56 223.0 190 64.2
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 3.2e-56 222.2 175 68.0
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 4.2e-56 221.9 168 66.1
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 4.2e-56 221.9 173 67.6
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 5.5e-56 221.5 175 65.7
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 9.4e-56 220.7 174 65.5
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 6.1e-55 218.0 187 64.2
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 6.1e-55 218.0 233 55.8
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 6.1e-55 218.0 190 62.1
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.0e-54 217.2 184 65.8
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 2.3e-54 216.1 188 63.3
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 3.0e-54 215.7 180 64.4
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 3.0e-54 215.7 173 68.8
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 5.1e-54 214.9 190 63.2
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 1.5e-53 213.4 174 66.1
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 1.5e-53 213.4 178 64.6
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 2.6e-53 212.6 186 63.4
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 3.3e-53 212.2 176 65.9
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 3.7e-52 208.8 184 63.6
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 1.8e-51 206.5 177 63.3
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.8e-51 206.5 168 64.3
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 1.8e-51 206.5 175 64.0
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 2.0e-50 203.0 130 76.9
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.3e-49 200.3 186 59.7
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 1.3e-49 200.3 173 64.7
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.7e-49 199.9 158 67.1
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 3.2e-48 195.7 182 59.3
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 2.7e-47 192.6 176 60.2
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 8.0e-47 191.0 142 67.6
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.8e-46 189.9 186 60.2
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 5.7e-45 184.9 112 77.7
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 9.7e-45 184.1 112 79.5
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 2.2e-44 183.0 113 78.8
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 2.2e-44 183.0 113 78.8
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 2.8e-44 182.6 145 71.0
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 2.8e-44 182.6 113 77.9
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 3.7e-44 182.2 145 71.0
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 3.7e-44 182.2 113 77.9
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 5.9e-42 174.9 92 94.6
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 7.7e-42 174.5 118 73.7
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 8.5e-41 171.0 139 64.7
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 2.7e-39 166.0 92 84.8
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 1.8e-38 163.3 136 66.9
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 2.3e-38 162.9 92 83.7
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 3.1e-35 152.5 88 83.0
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 9.1e-35 151.0 102 76.5
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 1.3e-33 147.1 110 63.6
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 3.8e-33 145.6 110 62.7
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 4.0e-30 135.6 129 57.4
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 4.4e-29 132.1 139 48.9
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 2.8e-28 129.4 90 68.9
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 8.3e-28 127.9 111 55.0
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 1.1e-27 127.5 128 48.4
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 1.8e-27 126.7 97 60.8
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 2.0e-26 123.2 70 81.4
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 3.8e-25 119.0 70 75.7
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 3.3e-24 115.9 105 54.3
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 9.5e-24 114.4 81 66.7
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 2.8e-20 102.8 92 58.7
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.1e-08 64.3 85 35.3


User provided reference genes

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