Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 2.1e-101 372.5 199 100.0
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 7.4e-91 337.4 199 87.9
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.6e-90 336.3 199 87.9
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 3.4e-88 328.6 199 85.9
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 4.6e-77 291.6 199 79.4
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 8.7e-76 287.3 201 76.1
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.1e-75 287.0 199 78.4
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.1e-75 287.0 199 78.4
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 2.5e-75 285.8 199 77.4
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 2.5e-75 285.8 198 77.8
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 4.3e-75 285.0 199 76.9
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 2.1e-74 282.7 198 75.3
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 1.8e-73 279.6 199 75.9
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 3.1e-73 278.9 197 77.2
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 4.1e-73 278.5 199 75.4
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 5.3e-73 278.1 198 75.3
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 6.9e-73 277.7 193 76.2
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.2e-72 276.9 198 73.7
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 2.0e-72 276.2 172 82.6
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 2.6e-72 275.8 198 73.2
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 5.9e-72 274.6 199 73.9
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 7.6e-72 274.2 199 73.9
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 7.6e-72 274.2 199 73.9
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 7.6e-72 274.2 199 73.9
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 7.6e-72 274.2 199 73.9
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 1.7e-71 273.1 198 72.7
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 2.2e-71 272.7 199 74.9
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 2.2e-71 272.7 200 73.5
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 2.2e-71 272.7 197 73.1
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.9e-71 272.3 200 73.5
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 3.8e-71 271.9 199 73.4
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 3.8e-71 271.9 199 73.4
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 5.0e-71 271.6 161 85.7
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 5.0e-71 271.6 199 74.9
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 5.0e-71 271.6 198 73.7
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 6.5e-71 271.2 198 73.2
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 6.5e-71 271.2 194 74.2
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 8.5e-71 270.8 200 75.0
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 8.5e-71 270.8 177 79.1
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.1e-70 270.4 202 72.8
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 1.4e-70 270.0 200 73.0
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 1.4e-70 270.0 191 72.8
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.9e-70 269.6 194 73.7
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 1.9e-70 269.6 191 72.8
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 2.5e-70 269.2 200 75.0
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 2.5e-70 269.2 159 86.2
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 3.2e-70 268.9 198 72.2
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 3.2e-70 268.9 202 72.3
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 3.2e-70 268.9 199 72.9
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 3.2e-70 268.9 199 72.4
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 3.2e-70 268.9 191 72.8
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 4.2e-70 268.5 199 72.9
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 4.2e-70 268.5 199 72.9
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 5.5e-70 268.1 201 72.1
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.5e-70 268.1 199 72.4
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.5e-70 268.1 199 72.4
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 7.2e-70 267.7 200 73.0
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 7.2e-70 267.7 196 73.0
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 9.3e-70 267.3 199 71.9
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 9.3e-70 267.3 194 72.7
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 9.3e-70 267.3 172 79.7
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 1.2e-69 266.9 159 86.8
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 1.2e-69 266.9 198 72.2
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 1.6e-69 266.5 200 71.0
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 3.6e-69 265.4 197 73.6
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 3.6e-69 265.4 193 76.2
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 3.6e-69 265.4 199 70.9
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 3.6e-69 265.4 172 75.6
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 4.6e-69 265.0 199 72.4
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 7.9e-69 264.2 202 74.8
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 7.9e-69 264.2 199 72.9
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.0e-68 263.8 197 74.1
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.0e-68 263.8 172 78.5
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 1.3e-68 263.5 199 72.4
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 1.8e-68 263.1 199 71.4
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 3.0e-68 262.3 148 90.5
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 3.9e-68 261.9 197 73.6
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 5.1e-68 261.5 204 69.6
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 1.1e-67 260.4 163 83.4
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 1.5e-67 260.0 199 70.4
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 1.9e-67 259.6 198 69.2
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 1.9e-67 259.6 189 72.5
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 2.5e-67 259.2 199 68.3
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 7.4e-67 257.7 200 71.5
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.6e-66 256.5 204 68.1
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 1.6e-66 256.5 169 76.3
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 2.2e-66 256.1 165 79.4
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 2.8e-66 255.8 190 72.1
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.8e-66 255.8 170 77.6
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 1.1e-65 253.8 189 69.8
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 2.4e-65 252.7 189 71.4
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 3.1e-65 252.3 189 69.8
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 6.9e-65 251.1 199 66.8
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 2.6e-64 249.2 211 65.4
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 5.9e-64 248.1 199 65.8
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 2.7e-61 239.2 193 66.8
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 3.6e-61 238.8 147 85.0
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 6.9e-57 224.6 167 64.7
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 7.0e-49 198.0 165 57.0
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 2.9e-47 192.6 161 55.3
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 5.2e-44 181.8 144 73.6
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 8.2e-42 174.5 105 84.8
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 4.1e-41 172.2 158 52.5
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 4.1e-41 172.2 158 52.5
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 7.0e-41 171.4 175 50.9
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.0e-40 169.9 173 48.6
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.0e-40 169.9 173 48.6
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 8.5e-39 164.5 161 50.3
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 7.2e-38 161.4 103 80.6
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 3.6e-37 159.1 94 86.2
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 4.0e-36 155.6 102 78.4
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 2.2e-34 149.8 103 76.7
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.6e-32 143.7 118 67.8
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.0e-28 131.0 90 76.7
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.3e-26 124.0 88 68.2
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 5.0e-23 112.1 71 78.9
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 1.9e-22 110.2 169 34.3
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 7.3e-22 108.2 95 62.1
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 5.2e-20 102.1 161 32.3
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 1.8e-17 93.6 88 58.0
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 2.4e-17 93.2 94 57.4
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 5.4e-17 92.0 164 31.1
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.7e-15 87.0 99 51.5
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 9.5e-14 81.3 43 90.7
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 4.4e-11 72.4 156 30.8
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 4.1e-09 65.9 44 65.9
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 7.8e-08 61.6 91 38.5
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.9e-06 57.0 48 62.5


User provided reference genes

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