Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008915 Sechium edule HOM05D021455 ORTHO05D010440 2.0e-172 609.0 304 100.0
Sed0013342 Sechium edule HOM05D021455 ORTHO05D010440 2.1e-89 333.2 341 56.9
ClCG00G005860 Citrullus lanatus HOM05D021455 ORTHO05D010440 1.4e-85 320.5 343 53.9
ClCG07G001350 Citrullus lanatus HOM05D021455 ORTHO05D010440 1.4e-85 320.5 343 53.9
CsaV3_3G028310 Cucumis sativus L. HOM05D021455 ORTHO05D010440 2.0e-79 300.1 334 51.5
PGSC0003DMG400008116 Solanum tuberosum HOM05D008706 ORTHO05D010440 6.1e-12 75.9 318 25.8
MBI05_g20724_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 5.2e-11 72.8 285 25.6
PGSC0003DMG400008068 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.5e-10 71.2 318 26.1
CAN.G546.5 Capsicum annuum HOM05D008706 ORTHO05D010440 3.3e-10 70.1 316 25.9
Solyc11g069120.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 1.7e-09 67.8 156 33.3
MBI05_g28548_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 3.7e-09 66.6 308 23.7
Rhsim08G0220200 Rhododendron simsii HOM05D001729 ORTHO05D001155 8.2e-09 65.5 181 29.8
Aqoxy2G02919 Aquilegia oxysepala HOM05D007162 ORTHO05D007631 2.4e-08 63.9 208 29.8
CAN.G546.3 Capsicum annuum HOM05D008706 ORTHO05D010440 2.4e-08 63.9 187 28.3
Sed0018855 Sechium edule HOM05D021455 ORTHO05D010440 3.1e-08 63.5 68 52.9
Nitab4.5_0000032g0090 Nicotiana tabacum HOM05D000664 ORTHO05D000491 4.1e-08 63.2 129 33.3
Nitab4.5_0002715g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 4.1e-08 63.2 159 34.6
Peaxi162Scf01164g00027 Petunia axillaris HOM05D008706 ORTHO05D010440 4.1e-08 63.2 162 31.5
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 4.1e-08 63.2 187 29.9
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 5.3e-08 62.8 183 30.1
RcHm_v2.0_Chr5g0059531 Rosa chinensis HOM05D000664 ORTHO05D000491 5.3e-08 62.8 158 32.9
FvH4_1g19570 Fragaria vesca HOM05D000007 ORTHO05D045667 7.0e-08 62.4 141 31.2
PGSC0003DMG400022280 Solanum tuberosum HOM05D008706 ORTHO05D010440 7.0e-08 62.4 188 30.9
TAR362G1081 Trochodendron aralioides HOM05D007162 ORTHO05D007631 9.1e-08 62.0 215 27.0
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 1.2e-07 61.6 186 29.0
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 1.2e-07 61.6 186 29.0
ECA232G3527 Erigeron canadensis HOM05D000664 ORTHO05D000491 1.6e-07 61.2 192 30.2
Migut.G00030 Erythranthe guttata HOM05D007162 ORTHO05D007631 1.6e-07 61.2 133 32.3
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 1.6e-07 61.2 186 29.0
SalBow8G4721 Salvia bowleyana HOM05D007162 ORTHO05D007631 1.6e-07 61.2 141 29.8
Sopen12g023140 Solanum pennellii HOM05D008706 ORTHO05D010440 1.6e-07 61.2 155 32.9
Lsat_1_v5_gn_9_51461 Lactuca sativa HOM05D000664 ORTHO05D000491 2.0e-07 60.8 188 27.1
Peaxi162Scf00001g04121 Petunia axillaris HOM05D000007 ORTHO05D013549 2.0e-07 60.8 149 32.2
Migut.G00033 Erythranthe guttata HOM05D007162 ORTHO05D007631 2.7e-07 60.5 133 31.6
Aqoxy5G01770 Aquilegia oxysepala HOM05D000664 ORTHO05D009863 3.5e-07 60.1 141 32.6
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 3.5e-07 60.1 169 29.0
Duzib177G1102 Durio zibethinus HOM05D000664 ORTHO05D000491 4.5e-07 59.7 187 30.5
Nitab4.5_0001201g0040 Nicotiana tabacum HOM05D008706 ORTHO05D010440 4.5e-07 59.7 166 31.3
MELO3C005495.2 Cucumis melo HOM05D000664 ORTHO05D000491 5.9e-07 59.3 130 33.8
Lj8C46T5 Lonicera japonica HOM05D000664 ORTHO05D000491 5.9e-07 59.3 132 35.6
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 5.9e-07 59.3 168 28.6
SGA_v2.0_scaffold69G23275 Striga asiatica HOM05D000664 ORTHO05D000491 5.9e-07 59.3 162 29.6
Duzib177G1156 Durio zibethinus HOM05D000664 ORTHO05D000491 7.7e-07 58.9 159 28.9
Gohir.D13G165600 Gossypium hirsutum HOM05D000664 ORTHO05D000491 7.7e-07 58.9 145 33.8
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 7.7e-07 58.9 185 28.6
Oeu060863.1 Olea europaea HOM05D000664 ORTHO05D000491 1.0e-06 58.5 129 33.3
TAR636G0432 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.0e-06 58.5 318 22.0
CAN.G1110.53 Capsicum annuum HOM05D001729 ORTHO05D001155 1.3e-06 58.2 196 28.1
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 1.3e-06 58.2 183 31.1
Lsat_1_v5_gn_9_51281 Lactuca sativa HOM05D000664 ORTHO05D000491 1.3e-06 58.2 171 31.0
Lsat_1_v5_gn_9_51501 Lactuca sativa HOM05D000664 ORTHO05D000491 1.3e-06 58.2 149 28.9
Nn4g25520 Nelumbo nucifera HOM05D007162 ORTHO05D007631 1.3e-06 58.2 215 28.4
Oeu016027.1 Olea europaea HOM05D007779 ORTHO05D009863 1.3e-06 58.2 169 26.6
Peaxi162Scf00347g00087 Petunia axillaris HOM05D008706 ORTHO05D010440 1.3e-06 58.2 177 32.2
unitig_0.g2579 Utricularia gibba HOM05D007162 ORTHO05D007631 1.3e-06 58.2 138 29.7
Nitab4.5_0001201g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 1.7e-06 57.8 166 31.3
Carub.0001s3224 Capsella rubella HOM05D000171 ORTHO05D000101 2.2e-06 57.4 151 29.8
Duzib177G1036 Durio zibethinus HOM05D000664 ORTHO05D000491 2.2e-06 57.4 187 29.9
ECA232G2763 Erigeron canadensis HOM05D000664 ORTHO05D000491 2.2e-06 57.4 182 28.6
Gorai.013G197000 Gossypium raimondii HOM05D000664 ORTHO05D000491 2.2e-06 57.4 142 34.5
PSO063G7044 Papaver somniferum HOM05D008326 ORTHO05D001155 2.2e-06 57.4 195 27.7
PGSC0003DMG400037185 Solanum tuberosum HOM05D008706 ORTHO05D010440 2.2e-06 57.4 164 31.1
Aqoxy7G01734 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 2.9e-06 57.0 166 31.9
C04p46160 Brassica napus HOM05D000171 ORTHO05D000101 2.9e-06 57.0 141 30.5
COL.COLO4_38551 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.9e-06 57.0 159 28.9
Dinv05848 Davidia involucrata HOM05D000007 ORTHO05D000521 2.9e-06 57.0 165 30.3
FvH4_3g32490 Fragaria vesca HOM05D000664 ORTHO05D000491 2.9e-06 57.0 160 34.4
Gohir.D07G047500 Gossypium hirsutum HOM05D000664 ORTHO05D000491 2.9e-06 57.0 134 32.1
Lsat_1_v5_gn_9_51601 Lactuca sativa HOM05D000664 ORTHO05D000491 2.9e-06 57.0 159 30.2
Lsat_1_v5_gn_9_68740 Lactuca sativa HOM05D000007 ORTHO05D000017 2.9e-06 57.0 109 37.6
PSO135G0788 Papaver somniferum HOM05D001729 ORTHO05D001155 2.9e-06 57.0 151 27.2
PSO384G0370 Papaver somniferum HOM05D001729 ORTHO05D001155 2.9e-06 57.0 154 27.3
Sabra12G0017100 Salix brachista HOM05D000007 ORTHO05D000039 2.9e-06 57.0 218 25.2
Solyc12g044775.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 2.9e-06 57.0 152 31.6
Sopen12g023130 Solanum pennellii HOM05D008706 ORTHO05D010440 2.9e-06 57.0 155 29.7
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 2.9e-06 57.0 152 30.3
ATR1136G141 Amborella trichopoda HOM05D011842 ORTHO05D011366 3.8e-06 56.6 101 37.6
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 3.8e-06 56.6 164 31.7
Ciclev10028647m.g Citrus clementina HOM05D000007 ORTHO05D000039 3.8e-06 56.6 133 31.6
Duzib106G1172 Durio zibethinus HOM05D000664 ORTHO05D000491 3.8e-06 56.6 135 34.8
AL6G47130 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 5.0e-06 56.2 171 24.6
CAN.G231.32 Capsicum annuum HOM05D000664 ORTHO05D000491 5.0e-06 56.2 156 31.4
COL.COLO4_31811 Corchorus olitorius HOM05D000007 ORTHO05D000039 5.0e-06 56.2 239 27.2
Dinv04029 Davidia involucrata HOM05D001729 ORTHO05D001155 5.0e-06 56.2 182 28.0
HanXRQChr03g0067811 Helianthus annuus HOM05D000664 ORTHO05D000491 5.0e-06 56.2 152 30.3
QL11p009094 Quercus lobata HOM05D001729 ORTHO05D001155 5.0e-06 56.2 173 30.6
PGSC0003DMG400009944 Solanum tuberosum HOM05D008706 ORTHO05D010440 5.0e-06 56.2 170 30.6
PGSC0003DMG400024780 Solanum tuberosum HOM05D008706 ORTHO05D010440 5.0e-06 56.2 202 27.7
Gorai.001G050600 Gossypium raimondii HOM05D000664 ORTHO05D000491 6.5e-06 55.8 130 33.1
Medtr1g055165 Medicago truncatula HOM05D000007 ORTHO05D000017 6.5e-06 55.8 240 25.8
Thhalv10012275m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.5e-06 55.5 179 27.9
FAN19G1733 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.5e-06 55.5 155 28.4
Hund15878 Selenicereus undatus HOM05D001729 ORTHO05D001155 8.5e-06 55.5 154 31.2
Sopen04g027220 Solanum pennellii HOM05D000173 ORTHO05D000316 8.5e-06 55.5 128 30.5
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 8.5e-06 55.5 140 33.6


User provided reference genes

Program Settings