Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 1.3e-58 229.6 124 100.0
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.8e-47 192.6 121 84.3
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 3.1e-47 191.8 121 85.1
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 6.9e-47 190.7 121 84.3
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 9.0e-47 190.3 118 86.4
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 9.0e-47 190.3 121 84.3
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.6e-46 188.7 121 82.6
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 2.6e-46 188.7 121 83.5
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 3.4e-46 188.3 121 83.5
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 7.7e-46 187.2 121 81.8
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.7e-46 187.2 121 82.6
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 7.7e-46 187.2 121 81.8
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 7.7e-46 187.2 121 81.8
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 7.7e-46 187.2 121 81.8
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 1.0e-45 186.8 121 82.6
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.3e-45 186.4 121 81.8
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.7e-45 186.0 121 81.8
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 1.7e-45 186.0 121 81.0
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.7e-45 186.0 121 82.6
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 1.7e-45 186.0 121 82.6
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 2.9e-45 185.3 121 81.8
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 3.8e-45 184.9 121 81.0
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 6.5e-45 184.1 121 81.0
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 8.5e-45 183.7 121 81.0
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 8.5e-45 183.7 121 81.0
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 1.1e-44 183.3 121 79.3
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.4e-44 183.0 121 78.5
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.4e-44 183.0 121 78.5
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 2.5e-44 182.2 121 80.2
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.5e-44 182.2 121 79.3
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 5.5e-44 181.0 121 81.8
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 5.5e-44 181.0 118 81.4
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.2e-43 179.9 121 79.3
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 1.2e-43 179.9 121 80.2
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.6e-43 179.5 118 81.4
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.6e-43 179.5 118 81.4
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 1.6e-43 179.5 121 78.5
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 2.7e-43 178.7 118 79.7
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 3.6e-43 178.3 121 78.5
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 4.6e-43 177.9 121 76.9
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 6.1e-43 177.6 121 77.7
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 7.9e-43 177.2 121 76.9
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 7.9e-43 177.2 123 78.9
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.0e-42 176.8 121 78.5
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.4e-42 176.4 121 76.9
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.4e-42 176.4 121 76.9
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.3e-42 175.6 121 77.7
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 3.0e-42 175.3 121 77.7
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 3.9e-42 174.9 118 78.8
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 3.9e-42 174.9 118 78.8
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 3.9e-42 174.9 121 77.7
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 5.1e-42 174.5 121 76.0
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 5.1e-42 174.5 118 81.4
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 5.1e-42 174.5 121 76.0
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 5.1e-42 174.5 121 76.9
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 6.7e-42 174.1 121 76.0
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 8.8e-42 173.7 118 78.0
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.1e-41 173.3 121 76.0
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 1.1e-41 173.3 116 78.4
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 1.5e-41 172.9 118 78.8
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 1.5e-41 172.9 121 75.2
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 1.5e-41 172.9 121 76.9
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 2.0e-41 172.6 121 78.5
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 2.5e-41 172.2 121 79.3
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 3.3e-41 171.8 121 76.9
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.3e-41 171.4 122 77.9
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.3e-41 171.4 121 74.4
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 4.3e-41 171.4 121 76.0
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 5.7e-41 171.0 121 76.0
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 5.7e-41 171.0 121 76.0
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 5.7e-41 171.0 121 70.2
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.7e-40 169.5 121 72.7
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.7e-40 169.5 121 72.7
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 2.2e-40 169.1 121 73.6
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 2.8e-40 168.7 125 76.8
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 3.7e-40 168.3 121 71.9
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 8.2e-40 167.2 121 74.4
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 2.4e-39 165.6 121 73.6
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 3.1e-39 165.2 121 74.4
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 9.1e-39 163.7 121 71.9
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 9.1e-39 163.7 121 75.2
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.0e-38 162.5 123 72.4
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 2.0e-38 162.5 121 71.9
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 4.5e-38 161.4 105 82.9
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.3e-37 159.8 113 76.1
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 5.0e-37 157.9 116 75.9
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 3.2e-36 155.2 164 57.3
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 9.4e-36 153.7 129 65.9
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.1e-35 152.5 98 81.6
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 2.1e-35 152.5 122 73.0
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 2.7e-35 152.1 113 75.2
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 1.0e-34 150.2 121 69.4
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 1.8e-34 149.4 121 68.6
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 1.8e-34 149.4 121 68.6
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 2.3e-34 149.1 96 82.3
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.3e-34 149.1 116 71.6
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.9e-34 148.3 96 81.2
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 2.4e-31 139.0 92 81.5
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.6e-30 136.3 175 51.4
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.6e-30 136.3 96 75.0
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 4.5e-30 134.8 88 79.5
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 2.9e-29 132.1 121 57.0
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 3.8e-29 131.7 121 57.0
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 6.5e-29 131.0 93 78.5
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 6.1e-27 124.4 92 71.7
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 2.6e-25 119.0 92 70.7
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.5e-25 117.5 72 83.3
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 6.3e-24 114.4 92 68.5
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 4.1e-23 111.7 93 66.7
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 3.5e-22 108.6 62 88.7
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.0e-21 104.8 66 83.3
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 1.9e-20 102.8 113 48.7
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 8.0e-19 97.4 63 73.0
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 2.3e-18 95.9 62 79.0
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.2e-17 93.6 92 51.1
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 4.4e-17 91.7 62 72.6
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 9.8e-17 90.5 100 58.0
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 4.8e-16 88.2 62 71.0
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 7.2e-12 74.3 57 70.2
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 7.2e-12 74.3 57 71.9
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 5.2e-10 68.2 110 31.8
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 3.4e-09 65.5 48 77.1
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 5.4e-07 58.2 61 45.9
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 5.4e-07 58.2 109 31.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.2e-06 57.0 59 59.3


User provided reference genes

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