Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008812 Sechium edule HOM05D000003 ORTHO05D000126 4.9e-126 454.5 237 100.0
Sed0009361 Sechium edule HOM05D028843 ORTHO05D000126 2.1e-36 156.8 163 58.9
Sed0025570 Sechium edule HOM05D000003 ORTHO05D000126 4.6e-23 112.5 179 35.8
Sed0017531 Sechium edule HOM05D000003 ORTHO05D000126 5.1e-22 109.0 180 36.7
Sed0013654 Sechium edule HOM05D000003 ORTHO05D000126 4.7e-20 102.4 159 34.6
Sed0026203 Sechium edule HOM05D000003 ORTHO05D000126 1.1e-19 101.3 188 32.4
Atru.chr1.3557 Acer truncatum HOM05D000003 ORTHO05D000126 3.3e-13 79.7 187 26.7
Atru.chr5.1805 Acer truncatum HOM05D000003 ORTHO05D000126 3.3e-13 79.7 149 31.5
Atru.chr10.301 Acer truncatum HOM05D000003 ORTHO05D000126 4.3e-13 79.3 178 28.1
Atru.chr2.314 Acer truncatum HOM05D000003 ORTHO05D000126 5.6e-13 79.0 184 29.3
Sed0024751 Sechium edule HOM05D000003 ORTHO05D000126 5.6e-13 79.0 94 41.5
Sed0000613 Sechium edule HOM05D000003 ORTHO05D000126 1.3e-12 77.8 190 29.5
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.1e-12 77.0 179 29.1
Sed0009453 Sechium edule HOM05D000003 ORTHO05D000126 2.1e-12 77.0 156 30.8
Atru.chr11.2021 Acer truncatum HOM05D000003 ORTHO05D000126 2.8e-12 76.6 147 29.3
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 6.2e-12 75.5 168 30.4
Atru.chr9.913 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-12 75.5 176 27.8
Atru.chr1.2555 Acer truncatum HOM05D000003 ORTHO05D000126 1.1e-11 74.7 149 31.5
Atru.chr6.1097 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-11 74.3 187 26.2
Atru.chr13.1937 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-11 73.9 147 27.2
Atru.chr6.1085 Acer truncatum HOM05D000003 ORTHO05D000126 3.1e-11 73.2 187 26.2
Atru.chr13.2168 Acer truncatum HOM05D000003 ORTHO05D000126 5.3e-11 72.4 149 30.9
CSS0018636 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 5.3e-11 72.4 192 28.1
Atru.chr13.2021 Acer truncatum HOM05D000003 ORTHO05D000126 6.9e-11 72.0 149 28.9
Atru.chr13.697 Acer truncatum HOM05D000003 ORTHO05D000126 6.9e-11 72.0 150 30.7
Atru.chr4.991 Acer truncatum HOM05D000003 ORTHO05D000126 9.0e-11 71.6 150 30.7
CSS0049896 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 9.0e-11 71.6 180 26.7
Atru.chr13.2520 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-10 71.2 145 28.3
Atru.chr11.854 Acer truncatum HOM05D000003 ORTHO05D000126 1.5e-10 70.9 155 29.0
Atru.chr12.2439 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-10 70.9 176 26.1
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.0e-10 70.5 179 27.9
CSS0041731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.0e-10 70.5 180 26.1
Atru.chr13.2083 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-10 70.1 147 26.5
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 3.4e-10 69.7 149 28.9
Atru.chr13.1167 Acer truncatum HOM05D000003 ORTHO05D000126 5.8e-10 68.9 151 26.5
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 5.8e-10 68.9 179 28.5
AUR62001732 Chenopodium quinoa HOM05D000003 ORTHO05D000126 5.8e-10 68.9 188 27.1
AUR62008807 Chenopodium quinoa HOM05D000003 ORTHO05D000126 5.8e-10 68.9 188 28.7
AUR62039640 Chenopodium quinoa HOM05D000003 ORTHO05D000126 7.6e-10 68.6 178 27.0
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-10 68.6 186 24.2
Atru.chr4.3089 Acer truncatum HOM05D000003 ORTHO05D000126 1.7e-09 67.4 146 27.4
QL02p079362 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-09 67.0 163 28.2
Atru.chr11.1277 Acer truncatum HOM05D000003 ORTHO05D000126 2.9e-09 66.6 149 26.8
Atru.chr3.1908 Acer truncatum HOM05D000003 ORTHO05D000126 3.8e-09 66.2 177 24.3
Atru.chr7.175 Acer truncatum HOM05D000003 ORTHO05D000126 3.8e-09 66.2 126 30.2
ClCG08G005700 Citrullus lanatus HOM05D000003 ORTHO05D000126 3.8e-09 66.2 178 25.8
Atru.chr3.2934 Acer truncatum HOM05D000003 ORTHO05D000006 4.9e-09 65.9 166 27.7
Atru.chr7.664 Acer truncatum HOM05D000003 ORTHO05D000004 6.4e-09 65.5 154 28.6
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 8.4e-09 65.1 180 27.2
Atru.chr6.2297 Acer truncatum HOM05D000003 ORTHO05D000126 1.1e-08 64.7 146 28.1
Atru.chr6.490 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-08 64.7 177 23.7
Atru.chr11.1735 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-08 64.3 165 27.3
Atru.chr11.971 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-08 64.3 146 26.7
Atru.chr3.1568 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-08 64.3 187 26.2
Atru.chr3.1587 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-08 64.3 187 26.2
Atru.chr7.810 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-08 64.3 177 24.3
AUR62036218 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.4e-08 64.3 179 23.5
Dinv16534 Davidia involucrata HOM05D000003 ORTHO05D000126 1.4e-08 64.3 153 26.8
Atru.chr4.887 Acer truncatum HOM05D000003 ORTHO05D000126 1.9e-08 63.9 121 29.8
Atru.chr12.2219 Acer truncatum HOM05D000003 ORTHO05D000126 2.4e-08 63.5 146 28.8
Atru.chr4.1955 Acer truncatum HOM05D000003 ORTHO05D000126 2.4e-08 63.5 178 23.6
Sed0022413 Sechium edule HOM05D000003 ORTHO05D000126 2.4e-08 63.5 63 41.3
Atru.chr5.3356 Acer truncatum HOM05D000003 ORTHO05D000126 3.2e-08 63.2 134 26.1
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.2e-08 62.8 148 27.7
Lj4C893T10 Lonicera japonica HOM05D000003 ORTHO05D000126 4.2e-08 62.8 176 29.0
Atru.chr9.1112 Acer truncatum HOM05D000003 ORTHO05D000126 5.4e-08 62.4 160 25.0
Atru.chr9.959 Acer truncatum HOM05D000003 ORTHO05D000126 5.4e-08 62.4 117 29.9
Atru.chr4.127 Acer truncatum HOM05D000003 ORTHO05D000126 7.1e-08 62.0 145 26.2
Atru.chr3.2388 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-07 61.2 159 25.2
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 1.2e-07 61.2 180 25.0
Atru.chr3.2408 Acer truncatum HOM05D000003 ORTHO05D000126 1.6e-07 60.8 122 27.9
Atru.chr7.1046 Acer truncatum HOM05D000003 ORTHO05D000126 1.6e-07 60.8 130 26.9
Atru.chr9.1190 Acer truncatum HOM05D000003 ORTHO05D000126 1.6e-07 60.8 123 30.1
Atru.chr6.2327 Acer truncatum HOM05D000003 ORTHO05D000126 2.1e-07 60.5 130 27.7
Atru.chr7.591 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-07 60.5 154 26.0
AUR62022477 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.1e-07 60.5 148 25.7
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 2.1e-07 60.5 142 26.1
Hma1.2p1_1456F.1_g284630 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 2.1e-07 60.5 144 26.4
TPR.G23677 Trifolium pratense HOM05D000003 ORTHO05D000126 2.1e-07 60.5 146 25.3
QL11p025676 Quercus lobata HOM05D000003 ORTHO05D000126 2.7e-07 60.1 138 26.1
Sed0013131 Sechium edule HOM05D015416 ORTHO05D023128 2.7e-07 60.1 181 25.4
Sed0016457 Sechium edule HOM05D000003 ORTHO05D000126 2.7e-07 60.1 181 25.4
Sed0019411 Sechium edule HOM05D000003 ORTHO05D000126 2.7e-07 60.1 181 25.4
Atru.chr2.2359 Acer truncatum HOM05D000003 ORTHO05D000126 3.5e-07 59.7 146 26.7
Atru.chr3.1852 Acer truncatum HOM05D000003 ORTHO05D000126 3.5e-07 59.7 128 28.9
AUR62027183 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.5e-07 59.7 178 25.3
Atru.chr13.1329 Acer truncatum HOM05D000003 ORTHO05D000126 4.6e-07 59.3 145 26.9
Atru.chr4.156 Acer truncatum HOM05D000003 ORTHO05D000126 4.6e-07 59.3 179 22.9
Dinv03294 Davidia involucrata HOM05D000003 ORTHO05D000126 4.6e-07 59.3 180 26.1
Atru.chr13.891 Acer truncatum HOM05D000003 ORTHO05D000126 6.0e-07 58.9 166 24.7
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 6.0e-07 58.9 141 25.5
Atru.chr10.111 Acer truncatum HOM05D000003 ORTHO05D000126 7.9e-07 58.5 129 31.0
Atru.chr10.94 Acer truncatum HOM05D000003 ORTHO05D000126 7.9e-07 58.5 129 31.0
Atru.chr6.67 Acer truncatum HOM05D000003 ORTHO05D000126 7.9e-07 58.5 158 25.9
Dinv18185 Davidia involucrata HOM05D000003 ORTHO05D000126 7.9e-07 58.5 189 25.9
QL06p008405 Quercus lobata HOM05D000003 ORTHO05D000126 7.9e-07 58.5 183 26.2
TPR.G5809 Trifolium pratense HOM05D000003 ORTHO05D000126 7.9e-07 58.5 156 24.4
Atru.chr3.1630 Acer truncatum HOM05D000003 ORTHO05D000126 1.0e-06 58.2 122 29.5
AUR62003468 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.0e-06 58.2 179 25.1
Atru.chr1.1793 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-06 57.8 74 36.5
Atru.chr8.1207 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-06 57.8 119 26.9
Atru.chr8.873 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-06 57.8 155 21.3
Sed0003755 Sechium edule HOM05D000003 ORTHO05D000126 1.3e-06 57.8 138 27.5
Sed0022123 Sechium edule HOM05D021366 ORTHO05D000126 1.3e-06 57.8 148 27.7
Atru.chr3.1004 Acer truncatum HOM05D000003 ORTHO05D000126 1.7e-06 57.4 141 26.2
AUR62031646 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.7e-06 57.4 146 27.4
Dinv10341 Davidia involucrata HOM05D001724 ORTHO05D007284 1.7e-06 57.4 165 24.2
Sed0017815 Sechium edule HOM05D000003 ORTHO05D000126 1.7e-06 57.4 149 25.5
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 2.3e-06 57.0 144 26.4
AUR62022172 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.3e-06 57.0 178 25.3
AUR62040080 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.3e-06 57.0 178 25.8
Dinv19479 Davidia involucrata HOM05D000077 ORTHO05D000339 2.3e-06 57.0 179 24.6
Dinv32967 Davidia involucrata HOM05D000280 ORTHO05D003998 2.3e-06 57.0 179 24.6
QL02p074046 Quercus lobata HOM05D000003 ORTHO05D000126 2.3e-06 57.0 151 27.2
Atru.chr3.1685 Acer truncatum HOM05D000003 ORTHO05D000126 3.0e-06 56.6 131 29.8
Lj6C513G2 Lonicera japonica HOM05D000003 ORTHO05D000126 3.9e-06 56.2 185 24.3
QL04p013046 Quercus lobata HOM05D000003 ORTHO05D000126 3.9e-06 56.2 146 21.2
TPR.G40617 Trifolium pratense HOM05D000003 ORTHO05D000126 3.9e-06 56.2 174 21.8
CANSAT35G1518 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-06 55.8 149 25.5
Haze_24155 Corylus avellana HOM05D026809 ORTHO05D029158 5.1e-06 55.8 123 30.1
QL05p083215 Quercus lobata HOM05D000003 ORTHO05D000126 5.1e-06 55.8 122 28.7
QL04p012421 Quercus lobata HOM05D000003 ORTHO05D000126 6.6e-06 55.5 185 21.6
Sed0022475 Sechium edule HOM05D020992 ORTHO05D000126 6.6e-06 55.5 172 26.7
CANSAT80G2013 Cannabis sativa HOM05D000003 ORTHO05D000126 8.7e-06 55.1 154 24.7
AUR62030615 Chenopodium quinoa HOM05D000003 ORTHO05D000126 8.7e-06 55.1 177 26.0
QL01p029685 Quercus lobata HOM05D000003 ORTHO05D000126 8.7e-06 55.1 186 26.9


User provided reference genes

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