Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 3.3e-260 901.4 521 100.0
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 1.7e-219 766.1 526 83.7
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 2.3e-216 755.7 528 84.7
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 1.3e-211 740.0 527 82.0
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 5.0e-163 578.6 469 68.2
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 4.8e-158 562.0 468 66.2
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 1.8e-157 560.1 468 66.0
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 4.5e-156 555.4 473 66.6
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 1.3e-155 553.9 525 65.1
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 6.1e-153 545.0 474 66.0
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 5.7e-151 538.5 472 63.6
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 3.7e-150 535.8 472 64.0
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 6.3e-150 535.0 473 64.1
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 1.2e-148 530.8 472 64.2
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 7.7e-148 528.1 471 63.9
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 4.7e-145 518.8 530 57.9
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 1.8e-144 516.9 473 62.8
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 3.9e-144 515.8 473 61.3
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 1.3e-142 510.8 529 59.7
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 6.3e-142 508.4 473 61.3
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 1.1e-141 507.7 476 61.6
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 3.1e-141 506.1 472 61.7
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 1.2e-140 504.2 555 55.3
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 2.6e-140 503.1 472 59.5
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 1.0e-139 501.1 472 60.8
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 5.0e-139 498.8 525 56.2
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 8.5e-139 498.0 473 60.7
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 1.5e-138 497.3 485 59.4
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 2.5e-138 496.5 520 57.5
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 3.2e-138 496.1 474 61.2
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 7.2e-138 495.0 474 59.9
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 7.2e-138 495.0 520 57.1
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 1.6e-137 493.8 472 60.4
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 2.1e-137 493.4 418 65.1
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 2.3e-136 490.0 466 59.0
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 3.0e-136 489.6 475 59.8
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 3.0e-136 489.6 471 58.8
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 4.0e-136 489.2 529 56.9
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 1.5e-135 487.3 472 60.8
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 3.4e-135 486.1 525 55.6
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 4.4e-135 485.7 464 59.5
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 5.7e-135 485.3 471 59.2
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 1.3e-134 484.2 494 57.1
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 3.7e-134 482.6 472 58.5
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 4.8e-134 482.3 499 57.7
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.1e-133 481.1 499 57.9
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 1.8e-133 480.3 456 59.9
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.8e-133 480.3 481 58.2
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 2.4e-133 479.9 471 59.7
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 3.1e-133 479.6 526 55.7
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 5.3e-133 478.8 517 57.6
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 7.0e-133 478.4 526 56.5
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 1.6e-132 477.2 526 56.3
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 2.0e-132 476.9 470 57.9
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 5.9e-132 475.3 458 57.6
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 1.0e-131 474.6 530 54.2
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 1.7e-131 473.8 525 54.5
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 1.7e-131 473.8 525 54.5
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 2.2e-131 473.4 532 55.5
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 5.0e-131 472.2 472 55.9
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 5.5e-130 468.8 480 56.7
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 5.5e-130 468.8 480 56.7
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 9.4e-130 468.0 473 57.3
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 9.4e-130 468.0 464 57.5
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 1.2e-129 467.6 487 56.5
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 1.6e-129 467.2 470 58.1
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 3.6e-129 466.1 533 54.0
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 8.0e-129 464.9 415 60.7
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 2.3e-128 463.4 524 53.2
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 4.0e-128 462.6 470 56.6
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 6.8e-128 461.8 545 52.5
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 1.5e-127 460.7 470 57.7
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 2.6e-127 459.9 537 53.8
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 3.4e-127 459.5 410 61.2
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 7.5e-127 458.4 472 54.9
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 7.5e-127 458.4 415 62.2
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 1.7e-126 457.2 408 59.3
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 1.7e-126 457.2 473 58.1
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 2.2e-126 456.8 472 57.0
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 3.7e-126 456.1 414 61.8
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 4.8e-126 455.7 541 53.2
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 6.3e-126 455.3 416 60.3
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 1.4e-125 454.1 410 61.0
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 1.4e-125 454.1 472 55.3
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 1.8e-125 453.8 482 56.6
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 1.6e-124 450.7 528 55.5
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 1.0e-123 448.0 413 59.3
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 8.6e-123 444.9 395 61.0
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.5e-122 444.1 454 57.0
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 2.5e-122 443.4 472 54.2
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 4.2e-122 442.6 468 53.2
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 2.1e-121 440.3 466 54.5
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 1.0e-120 438.0 550 50.4
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.4e-120 437.6 467 54.8
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 2.0e-119 433.7 471 53.7
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 4.5e-116 422.5 462 52.4
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 7.8e-116 421.8 416 58.4
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 7.3e-114 415.2 394 58.1
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 7.3e-114 415.2 392 57.9
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 2.3e-112 410.2 348 67.0
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 3.1e-112 409.8 445 51.5
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 4.0e-112 409.5 425 55.5
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 1.2e-111 407.9 408 56.1
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 2.0e-111 407.1 405 58.5
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 4.4e-111 406.0 424 55.9
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 1.9e-106 390.6 395 56.5
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 7.3e-106 388.7 471 52.2
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 4.0e-104 382.9 391 54.5
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 6.0e-100 369.0 402 55.7
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 3.9e-99 366.3 382 53.1
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 1.9e-98 364.0 326 63.2
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 6.0e-92 342.4 482 44.0
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 8.9e-88 328.6 479 42.2
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 7.6e-87 325.5 316 54.7
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 2.9e-86 323.6 501 41.7
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 2.8e-81 307.0 469 40.7
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 6.4e-78 295.8 294 55.4
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 1.4e-77 294.7 320 61.6
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 1.2e-76 291.6 278 59.0
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 1.6e-76 291.2 278 59.0
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.1e-76 290.8 324 55.2
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 3.2e-69 266.9 481 39.3
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 3.2e-69 266.9 308 51.3
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 6.7e-67 259.2 336 52.4
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 1.6e-65 254.6 577 37.3
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.0e-62 245.4 233 54.9
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 6.5e-62 242.7 310 54.5
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 1.9e-50 204.5 177 62.1
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 3.8e-46 190.3 175 65.1
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 2.8e-41 174.1 465 33.3
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.8e-40 171.4 164 58.5
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 3.0e-35 154.1 144 55.6
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 5.0e-30 136.7 159 50.3
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.1e-26 125.6 100 63.0
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 2.6e-26 124.4 103 63.1
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 2.6e-26 124.4 103 63.1
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 3.1e-24 117.5 144 52.1
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 8.5e-22 109.4 178 44.9
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 4.0e-19 100.5 126 43.7
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 5.7e-18 96.7 107 53.3
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 7.7e-15 86.3 117 49.6
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 2.9e-14 84.3 70 62.9
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 2.1e-12 78.2 117 47.9
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 1.8e-11 75.1 102 55.9
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 6.8e-11 73.2 75 54.7
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 8.8e-11 72.8 57 63.2
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 1.5e-10 72.0 107 37.4
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 3.4e-10 70.9 199 33.7
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 9.8e-10 69.3 154 37.0
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 4.9e-09 67.0 82 46.3
CSS0012251 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D006043 6.3e-09 66.6 125 47.2
Sabra01G0122300 Salix brachista HOM05D000001 ORTHO05D004986 9.2e-08 62.8 98 51.0
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 1.3e-06 58.9 241 28.2


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